Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FOXP4 Sequence: fasta or formatted (680aa) NCBI GI: 60498989
Description:

forkhead box P4 isoform 1

Referenced in:

FOX Family

Other entries for this name:
alt prot [667aa] forkhead box P4 isoform 2
alt prot [678aa] forkhead box P4 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         59           3
 C cysteine            1.0          7           1
 D aspartate           3.1         21           2
 E glutamate           6.0         41           3
 F phenylalanine       2.4         16           1
 G glycine             7.1         48           3
 H histidine           2.8         19           2
 I isoleucine          1.3          9           1
 K lysine              3.4         23           2
 L leucine            11.0         75           2
 M methionine          2.5         17           2
 N asparagine          3.5         24           2
 P proline             9.9         67           2
 Q glutamine          10.6         72           4
 R arginine            4.1         28           3
 S serine             10.4         71           3
 T threonine           5.0         34           2
 V valine              4.9         33           2
 W tryptophan          0.7          5           1
 Y tyrosine            1.6         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box P4 isoform 1 
FOXP4                 0.994   forkhead box P4 isoform 3 
FOXP4                 0.971   forkhead box P4 isoform 2 
FOXP2                 0.534   forkhead box P2 isoform I 
FOXP2                 0.508   forkhead box P2 isoform II 
FOXP1                 0.491   forkhead box P1 isoform 1 
FOXP2                 0.458   forkhead box P2 isoform III 
FOXP3                 0.144   forkhead box P3 isoform b 
FOXP3                 0.144   forkhead box P3 isoform a 
FOXK2                 0.050   forkhead box K2 
FOXA3                 0.050   forkhead box A3 
FOXJ1                 0.049   forkhead box J1 
FOXK1                 0.048   forkhead box K1 
FOXF1                 0.047   forkhead box F1 
FOXJ3                 0.047   forkhead box J3 
FOXC2                 0.047   forkhead box C2 
FOXG1                 0.046   forkhead box G1 
FOXO3                 0.045   forkhead box O3A 
FOXO3                 0.045   forkhead box O3A 
FOXJ2                 0.045   forkhead box J2 
FOXD1                 0.045   forkhead box D1 
FOXF2                 0.044   forkhead box F2 
FOXA2                 0.043   forkhead box A2 isoform 2 
FOXN3                 0.043   checkpoint suppressor 1 isoform 1 
FOXN3                 0.043   checkpoint suppressor 1 isoform 2 
FOXA2                 0.043   forkhead box A2 isoform 1 
FOXA1                 0.042   forkhead box A1 
FOXD3                 0.041   forkhead box D3 
FOXC1                 0.041   forkhead box C1 
FOXI3                 0.041   forkhead box I3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press