Guide to the Human Genome
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Name: FOXP3 Sequence: fasta or formatted (431aa) NCBI GI: 31982943
Description:

forkhead box P3 isoform a

Referenced in:

FOX Family

Other entries for this name:
alt prot [396aa] forkhead box P3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         42           2
 C cysteine            2.1          9           2
 D aspartate           2.8         12           1
 E glutamate           4.9         21           2
 F phenylalanine       4.2         18           2
 G glycine             6.3         27           2
 H histidine           3.9         17           1
 I isoleucine          1.6          7           1
 K lysine              4.6         20           2
 L leucine            10.9         47           2
 M methionine          2.6         11           1
 N asparagine          3.0         13           1
 P proline            11.1         48           2
 Q glutamine           4.2         18           2
 R arginine            6.3         27           2
 S serine              9.3         40           4
 T threonine           4.4         19           2
 V valine              5.1         22           2
 W tryptophan          2.1          9           1
 Y tyrosine            0.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box P3 isoform a 
FOXP3                 0.897   forkhead box P3 isoform b 
FOXP1                 0.237   forkhead box P1 isoform 1 
FOXP2                 0.225   forkhead box P2 isoform I 
FOXP2                 0.225   forkhead box P2 isoform III 
FOXP2                 0.225   forkhead box P2 isoform II 
FOXP4                 0.224   forkhead box P4 isoform 2 
FOXP4                 0.222   forkhead box P4 isoform 3 
FOXP4                 0.222   forkhead box P4 isoform 1 
FOXJ3                 0.069   forkhead box J3 
FOXJ2                 0.068   forkhead box J2 
FOXN3                 0.066   checkpoint suppressor 1 isoform 1 
FOXN3                 0.066   checkpoint suppressor 1 isoform 2 
FOXJ1                 0.066   forkhead box J1 
FOXC2                 0.063   forkhead box C2 
FOXE3                 0.062   forkhead box E3 
FOXL1                 0.062   forkhead box L1 
FOXC1                 0.062   forkhead box C1 
FOXI3                 0.061   forkhead box I3 
FOXE1                 0.060   forkhead box E1 
FOXG1                 0.060   forkhead box G1 
FOXD2                 0.060   forkhead box D2 
FOXL2                 0.060   forkhead box L2 
FOXA1                 0.059   forkhead box A1 
FOXK2                 0.057   forkhead box K2 
FOXF1                 0.057   forkhead box F1 
FOXI2                 0.057   forkhead box I2 
FOXA2                 0.057   forkhead box A2 isoform 2 
FOXI1                 0.057   forkhead box I1 isoform a 
FOXA2                 0.057   forkhead box A2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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