Guide to the Human Genome
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Name: FOXE1 Sequence: fasta or formatted (373aa) NCBI GI: 21618325
Description:

forkhead box E1

Referenced in:

FOX Family
Thyroid and Thyroid Hormone Receptor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            20.1         75          16
 C cysteine            1.3          5           1
 D aspartate           2.4          9           1
 E glutamate           3.8         14           2
 F phenylalanine       3.8         14           1
 G glycine            13.4         50           2
 H histidine           1.3          5           1
 I isoleucine          2.7         10           1
 K lysine              2.7         10           2
 L leucine             4.8         18           1
 M methionine          1.3          5           1
 N asparagine          2.1          8           1
 P proline            12.6         47           4
 Q glutamine           1.9          7           1
 R arginine            7.2         27           3
 S serine              5.6         21           2
 T threonine           4.0         15           3
 V valine              2.9         11           1
 W tryptophan          0.5          2           1
 Y tyrosine            5.4         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box E1 
FOXE3                 0.294   forkhead box E3 
FOXD1                 0.256   forkhead box D1 
FOXD2                 0.252   forkhead box D2 
FOXD3                 0.236   forkhead box D3 
FOXD4L1               0.214   forkhead box D4-like 1 
FOXC1                 0.204   forkhead box C1 
FOXD4L5               0.204   forkhead box D4-like 5 
FOXD4L6               0.202   forkhead box D4-like 6 
FOXD4L2               0.201   forkhead box D4-like 2 
FOXD4L4               0.201   forkhead box D4-like 4 
FOXD4L3               0.200   forkhead box D4-like 3 
FOXL2                 0.200   forkhead box L2 
FOXL1                 0.196   forkhead box L1 
FOXC2                 0.194   forkhead box C2 
FOXD4                 0.194   forkhead box D4 
FOXB2                 0.188   forkhead box B2 
FOXF2                 0.178   forkhead box F2 
FOXA3                 0.174   forkhead box A3 
FOXB1                 0.173   forkhead box B1 
FOXA2                 0.172   forkhead box A2 isoform 2 
FOXA2                 0.172   forkhead box A2 isoform 1 
FOXS1                 0.170   forkhead box S1 
FOXI3                 0.165   forkhead box I3 
FOXF1                 0.164   forkhead box F1 
FOXG1                 0.164   forkhead box G1 
FOXI2                 0.162   forkhead box I2 
FOXI1                 0.161   forkhead box I1 isoform a 
FOXA1                 0.161   forkhead box A1 
FOXQ1                 0.160   forkhead box Q1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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