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Search of human proteins with 31791038
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31791038 keratin associated protein 6-1 [Homo sapiens]
(71 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31791038 keratin associated protein 6-1 [Homo sapiens] 176 5e-45
gi|31791040 keratin associated protein 6-2 [Homo sapiens] 111 1e-25
gi|153945796 keratin associated protein 6-3 [Homo sapiens] 107 2e-24
gi|31791026 keratin associated protein 19-3 [Homo sapiens] 77 4e-15
gi|239744833 PREDICTED: hypothetical protein [Homo sapiens] 76 6e-15
gi|169206147 PREDICTED: hypothetical protein [Homo sapiens] 73 4e-14
gi|239750526 PREDICTED: hypothetical protein [Homo sapiens] 73 4e-14
gi|31791022 keratin associated protein 19-5 [Homo sapiens] 73 4e-14
gi|31791030 keratin associated protein 19-1 [Homo sapiens] 72 9e-14
gi|169205935 PREDICTED: hypothetical protein [Homo sapiens] 71 2e-13
gi|149944573 keratin associated protein 19-8 [Homo sapiens] 69 1e-12
gi|31791016 keratin associated protein 21-2 [Homo sapiens] 69 1e-12
gi|31791010 keratin associated protein 21-1 [Homo sapiens] 69 1e-12
gi|31791028 keratin associated protein 19-4 [Homo sapiens] 67 4e-12
gi|31791018 keratin associated protein 19-7 [Homo sapiens] 64 3e-11
gi|31791020 keratin associated protein 20-1 [Homo sapiens] 62 7e-11
gi|31791014 keratin associated protein 20-2 [Homo sapiens] 62 1e-10
gi|31791024 keratin associated protein 19-6 [Homo sapiens] 56 7e-09
gi|119395750 keratin 1 [Homo sapiens] 46 6e-06
gi|109255251 loricrin [Homo sapiens] 46 7e-06
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 45 9e-06
gi|55956899 keratin 9 [Homo sapiens] 44 2e-05
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 44 3e-05
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 44 3e-05
gi|194018511 keratin 77 [Homo sapiens] 42 1e-04
gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b... 42 1e-04
gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... 42 1e-04
gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... 42 1e-04
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 42 1e-04
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 42 1e-04
>gi|31791038 keratin associated protein 6-1 [Homo sapiens]
Length = 71
Score = 176 bits (445), Expect = 5e-45
Identities = 71/71 (100%), Positives = 71/71 (100%)
Query: 1 MCGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYG 60
MCGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYG
Sbjct: 1 MCGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYG 60
Query: 61 YGCGSGSGYYY 71
YGCGSGSGYYY
Sbjct: 61 YGCGSGSGYYY 71
>gi|31791040 keratin associated protein 6-2 [Homo sapiens]
Length = 62
Score = 111 bits (277), Expect = 1e-25
Identities = 50/71 (70%), Positives = 51/71 (71%), Gaps = 9/71 (12%)
Query: 1 MCGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYG 60
MCGSYYGNYYG GYG CGY GLGYGYG L CGY SCC G G+GYGSR CG G
Sbjct: 1 MCGSYYGNYYGDHGYGCCGYEGLGYGYGSLRCGYSSCC-------GYGHGYGSRFFCGCG 53
Query: 61 YGCGSGSGYYY 71
YGC GSGYYY
Sbjct: 54 YGC--GSGYYY 62
>gi|153945796 keratin associated protein 6-3 [Homo sapiens]
Length = 110
Score = 107 bits (268), Expect = 2e-24
Identities = 56/103 (54%), Positives = 57/103 (55%), Gaps = 32/103 (31%)
Query: 1 MCGSYYGNYYGTPGYGFCGYGGLG------------------------YGYGGLGCGYGS 36
MCGSYY NY G GYG CGYGGLG GYGGLGCGYGS
Sbjct: 8 MCGSYYRNYNGGHGYGCCGYGGLGCGYGGCGYGCCGYGGLGFGYGGLDCGYGGLGCGYGS 67
Query: 37 CCGCGFRRL----GCGYGYGSRSLCGYGYGCGSG----SGYYY 71
CGCG+R L GCGYGY S S CG GY CGSG GYYY
Sbjct: 68 FCGCGYRGLDCGYGCGYGYVSHSFCGCGYRCGSGYGSSFGYYY 110
>gi|31791026 keratin associated protein 19-3 [Homo sapiens]
Length = 81
Score = 76.6 bits (187), Expect = 4e-15
Identities = 42/69 (60%), Positives = 44/69 (63%), Gaps = 16/69 (23%)
Query: 4 SYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCG-FRRLGCGYGYGSRSLCGYGYG 62
SYYG+YYG GYG G+GGLGYGYG CGCG FRRLG G GYG GYGYG
Sbjct: 2 SYYGSYYGGLGYGCGGFGGLGYGYG---------CGCGSFRRLGSGCGYG-----GYGYG 47
Query: 63 CGSGSGYYY 71
G G GY Y
Sbjct: 48 SGFG-GYGY 55
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 17/58 (29%)
Query: 2 CGSY--------YGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGY 51
CGS+ YG Y G+G GYG G+G G GC S G GYG+
Sbjct: 29 CGSFRRLGSGCGYGGYGYGSGFGGYGYGS-GFGGYGYGCYRPSYYG--------GYGF 77
>gi|239744833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 129
Score = 75.9 bits (185), Expect = 6e-15
Identities = 47/104 (45%), Positives = 50/104 (48%), Gaps = 35/104 (33%)
Query: 1 MCGSYYGNYYGTPGYGFCGYG-GLGYGYG-------------GLGCGYGSCCGCGF-RRL 45
MC +YYGN G CGYG G GYGYG G GCGYGS GCG+
Sbjct: 1 MCCNYYGNSCGYGSSYGCGYGSGYGYGYGSSYGCGYGTGYSCGYGCGYGSGYGCGYGSSY 60
Query: 46 GCGYG--------------YGSRSLCGY------GYGCGSGSGY 69
GCGYG YGS S CGY GYGCG G+GY
Sbjct: 61 GCGYGTGYSCGYGSGYSCGYGSGSGCGYGTGFGCGYGCGYGTGY 104
Score = 47.8 bits (112), Expect = 2e-06
Identities = 32/61 (52%), Positives = 33/61 (54%), Gaps = 14/61 (22%)
Query: 3 GSYYGNYYGTP---GYGF---CGYG---GLGYGYG---GLGCGYGS--CCGCGFRRLGCG 48
GS YG YGT GYG CGYG G GYG G G GCGYG+ CGCG CG
Sbjct: 57 GSSYGCGYGTGYSCGYGSGYSCGYGSGSGCGYGTGFGCGYGCGYGTGYGCGCGSGSGYCG 116
Query: 49 Y 49
Y
Sbjct: 117 Y 117
>gi|169206147 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 73.2 bits (178), Expect = 4e-14
Identities = 44/81 (54%), Positives = 47/81 (58%), Gaps = 15/81 (18%)
Query: 1 MCGSYYGNYYGT---------PGYGFCGYGG-LGYGYG-GLGCGYGSCCGCGFRR-LGCG 48
MC +YYGN G GYG CGYG G GYG G CGYGS GCG+ GCG
Sbjct: 1 MCCNYYGNSCGYGCSYGCGYGSGYG-CGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCG 59
Query: 49 YGYGSRSLCGYGYGCGSGSGY 69
YG G + GYG GCGSGSGY
Sbjct: 60 YGCGYGT--GYGCGCGSGSGY 78
Score = 48.5 bits (114), Expect = 1e-06
Identities = 31/55 (56%), Positives = 32/55 (58%), Gaps = 10/55 (18%)
Query: 3 GSYYGNYYGTPGYGFCGYG-----GLGYGYG-GLGCGYGS--CCGCGFRRLGCGY 49
GS YG YGT GY CGYG G G GYG G GCGYG+ CGCG CGY
Sbjct: 29 GSSYGCGYGT-GYS-CGYGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGSGYCGY 81
>gi|239750526 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 73.2 bits (178), Expect = 4e-14
Identities = 44/81 (54%), Positives = 47/81 (58%), Gaps = 15/81 (18%)
Query: 1 MCGSYYGNYYGT---------PGYGFCGYGG-LGYGYG-GLGCGYGSCCGCGFRR-LGCG 48
MC +YYGN G GYG CGYG G GYG G CGYGS GCG+ GCG
Sbjct: 1 MCCNYYGNSCGYGCSYGCGYGSGYG-CGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCG 59
Query: 49 YGYGSRSLCGYGYGCGSGSGY 69
YG G + GYG GCGSGSGY
Sbjct: 60 YGCGYGT--GYGCGCGSGSGY 78
Score = 48.5 bits (114), Expect = 1e-06
Identities = 31/55 (56%), Positives = 32/55 (58%), Gaps = 10/55 (18%)
Query: 3 GSYYGNYYGTPGYGFCGYG-----GLGYGYG-GLGCGYGS--CCGCGFRRLGCGY 49
GS YG YGT GY CGYG G G GYG G GCGYG+ CGCG CGY
Sbjct: 29 GSSYGCGYGT-GYS-CGYGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGSGYCGY 81
>gi|31791022 keratin associated protein 19-5 [Homo sapiens]
Length = 72
Score = 73.2 bits (178), Expect = 4e-14
Identities = 40/69 (57%), Positives = 43/69 (62%), Gaps = 16/69 (23%)
Query: 4 SYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCG-FRRLGCGYGYGSRSLCGYGYG 62
+YYGNYYG GYG+ G+ LGYGYG CGCG FRRLG G GYG GYGYG
Sbjct: 2 NYYGNYYGGLGYGYGGFDDLGYGYG---------CGCGSFRRLGYGGGYG-----GYGYG 47
Query: 63 CGSGSGYYY 71
G G GY Y
Sbjct: 48 SGFG-GYGY 55
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/51 (45%), Positives = 25/51 (49%), Gaps = 12/51 (23%)
Query: 2 CGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYG 52
CGS+ YG GYG GYG G+GG GY SC R C GYG
Sbjct: 29 CGSFRRLGYGG-GYGGYGYGS---GFGGY--GYRSC------RPSCYGGYG 67
>gi|31791030 keratin associated protein 19-1 [Homo sapiens]
Length = 90
Score = 72.0 bits (175), Expect = 9e-14
Identities = 42/77 (54%), Positives = 46/77 (59%), Gaps = 14/77 (18%)
Query: 4 SYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCC----GCGFRRLGCG-----YGYGSR 54
S+YG+YYG GY G+GGLGYGY GCG GS C GCG+ G G YGYGS
Sbjct: 2 SHYGSYYGGLGYSCGGFGGLGYGY---GCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGS- 57
Query: 55 SLCGYGYGCGSGSGYYY 71
GYGYG G G GY Y
Sbjct: 58 GFGGYGYGSGFG-GYGY 73
Score = 40.8 bits (94), Expect = 2e-04
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGY 51
G YG+ +G+ GYG G+GG GYG G G GYG CC + GYG+
Sbjct: 43 GYGYGSGFGSYGYG-SGFGGYGYGSGFGGYGYG-CCRPSYNG---GYGF 86
Score = 37.7 bits (86), Expect = 0.002
Identities = 29/78 (37%), Positives = 34/78 (43%), Gaps = 25/78 (32%)
Query: 2 CGSY--------YGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGS 53
CGS+ YG Y G+G GYG G+G G G G+G GYGYG
Sbjct: 29 CGSFCRRGSGCGYGGYGYGSGFGSYGYGS-GFGGYGYGSGFG------------GYGYG- 74
Query: 54 RSLCGYGYGCGSG-SGYY 70
C Y G G SG+Y
Sbjct: 75 --CCRPSYNGGYGFSGFY 90
>gi|169205935 PREDICTED: hypothetical protein [Homo sapiens]
Length = 123
Score = 71.2 bits (173), Expect = 2e-13
Identities = 42/70 (60%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
Query: 3 GSYYGNYYGTPGYGFCGYGG-LGYGYG-GLGCGYGSCCGCGFRR-LGCGYGYGSRSLCGY 59
G YG YG+ GYG CGYG G GYG G CGYGS GCG+ GCGYG G + GY
Sbjct: 43 GCSYGCGYGS-GYG-CGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYGT--GY 98
Query: 60 GYGCGSGSGY 69
G GCGSGSGY
Sbjct: 99 GCGCGSGSGY 108
Score = 67.4 bits (163), Expect = 2e-12
Identities = 42/75 (56%), Positives = 44/75 (58%), Gaps = 11/75 (14%)
Query: 8 NYYGTP-GYGF---CGYG-GLGYGYGG-LGCGYGSCCGCGFRR-LGCGYG--YGSRSLCG 58
NYYG GYG CGYG G G GYG GCGYG+ CG+ GCGYG YG CG
Sbjct: 34 NYYGNSCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCG 93
Query: 59 YG--YGCGSGSGYYY 71
YG YGCG GSG Y
Sbjct: 94 YGTGYGCGCGSGSGY 108
Score = 48.5 bits (114), Expect = 1e-06
Identities = 31/55 (56%), Positives = 32/55 (58%), Gaps = 10/55 (18%)
Query: 3 GSYYGNYYGTPGYGFCGYG-----GLGYGYG-GLGCGYGS--CCGCGFRRLGCGY 49
GS YG YGT GY CGYG G G GYG G GCGYG+ CGCG CGY
Sbjct: 59 GSSYGCGYGT-GYS-CGYGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGSGYCGY 111
>gi|149944573 keratin associated protein 19-8 [Homo sapiens]
Length = 63
Score = 68.6 bits (166), Expect = 1e-12
Identities = 35/60 (58%), Positives = 39/60 (65%), Gaps = 13/60 (21%)
Query: 4 SYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGC 63
SYY +YYG GYG+ G+GG GYGY GCGYGS FRRLG G GYG GYG+ C
Sbjct: 2 SYYRSYYGGLGYGYGGFGGWGYGY---GCGYGS-----FRRLGYGCGYG-----GYGFSC 48
Score = 36.6 bits (83), Expect = 0.004
Identities = 15/22 (68%), Positives = 15/22 (68%)
Query: 46 GCGYGYGSRSLCGYGYGCGSGS 67
G GYGYG GYGYGCG GS
Sbjct: 10 GLGYGYGGFGGWGYGYGCGYGS 31
>gi|31791016 keratin associated protein 21-2 [Homo sapiens]
Length = 83
Score = 68.6 bits (166), Expect = 1e-12
Identities = 37/69 (53%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 1 MCGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYG 60
MC +YY N G GYG G GYG G GCGYGS C R G GYG G CGYG
Sbjct: 1 MCCNYYRNCCGGCGYGSGWSSGCGYGCG-YGCGYGSGC-----RYGSGYGTGCGYGCGYG 54
Query: 61 YGCGSGSGY 69
GCG G GY
Sbjct: 55 SGCGYGCGY 63
>gi|31791010 keratin associated protein 21-1 [Homo sapiens]
Length = 79
Score = 68.6 bits (166), Expect = 1e-12
Identities = 40/77 (51%), Positives = 44/77 (57%), Gaps = 19/77 (24%)
Query: 1 MCGSYYGNYYGTPGYGFCGYG---GLGYGYG-GLGCGYGSCCGCGFRRLGCGYGYGSRSL 56
MC +YYGN CGYG G GYG G G GCGYG+ GCG+ G G+GS
Sbjct: 1 MCCNYYGNS--------CGYGSGCGCGYGSGSGCGCGYGTGYGCGY-----GCGFGSHYG 47
Query: 57 CGY--GYGCGSGSGYYY 71
CGY GYGCG GSG Y
Sbjct: 48 CGYGTGYGCGYGSGSGY 64
>gi|31791028 keratin associated protein 19-4 [Homo sapiens]
Length = 84
Score = 66.6 bits (161), Expect = 4e-12
Identities = 37/70 (52%), Positives = 41/70 (58%), Gaps = 16/70 (22%)
Query: 4 SYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCG-FRRLGCGYGYGSRSLCGYGY- 61
SYYG+YY GYG G+GGLGYGYG CGCG FRRLG G G+G GYGY
Sbjct: 2 SYYGSYYRGLGYGCGGFGGLGYGYG---------CGCGSFRRLGYGCGFGGN---GYGYC 49
Query: 62 --GCGSGSGY 69
C G G+
Sbjct: 50 RPSCYGGYGF 59
>gi|31791018 keratin associated protein 19-7 [Homo sapiens]
Length = 63
Score = 63.9 bits (154), Expect = 3e-11
Identities = 36/67 (53%), Positives = 38/67 (56%), Gaps = 15/67 (22%)
Query: 4 SYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCG-FRRLGCGYGYGSRSLCGYGYG 62
SY G+YYG GYG G+GGLGYGY CGCG FRRLG G GYG GY Y
Sbjct: 2 SYSGSYYGGLGYGCGGFGGLGYGYS---------CGCGSFRRLGYGCGYG-----GYRYS 47
Query: 63 CGSGSGY 69
C S Y
Sbjct: 48 CCHPSCY 54
>gi|31791020 keratin associated protein 20-1 [Homo sapiens]
Length = 56
Score = 62.4 bits (150), Expect = 7e-11
Identities = 34/66 (51%), Positives = 36/66 (54%), Gaps = 26/66 (39%)
Query: 5 YYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGCG 64
YY NYYG GYGYGGLGCGY GCG+R GCGYG GYG G
Sbjct: 3 YYSNYYG------------GYGYGGLGCGY----GCGYRGYGCGYG-------GYG---G 36
Query: 65 SGSGYY 70
G+GYY
Sbjct: 37 YGNGYY 42
>gi|31791014 keratin associated protein 20-2 [Homo sapiens]
Length = 65
Score = 61.6 bits (148), Expect = 1e-10
Identities = 38/73 (52%), Positives = 39/73 (53%), Gaps = 21/73 (28%)
Query: 1 MCGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRR----LGCGYGYGSRSL 56
MC YY NYYG GL YGYG LG GYG CGCG+ LGCGYG R
Sbjct: 1 MC--YYSNYYG----------GLRYGYGVLGGGYG--CGCGYGHGYGGLGCGYG---RGY 43
Query: 57 CGYGYGCGSGSGY 69
GYGYGC S Y
Sbjct: 44 GGYGYGCCRPSCY 56
>gi|31791024 keratin associated protein 19-6 [Homo sapiens]
Length = 58
Score = 55.8 bits (133), Expect = 7e-09
Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 18/70 (25%)
Query: 5 YYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYG---YG-SRSLCGYG 60
YYG+YY GYG G+GGLGYG CGCG R G GYG YG R C G
Sbjct: 3 YYGSYYRGLGYGCGGFGGLGYG-----------CGCGGYRYGSGYGGYRYGCCRPSCREG 51
Query: 61 YGCGSGSGYY 70
YG SG+Y
Sbjct: 52 YGF---SGFY 58
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 46.2 bits (108), Expect = 6e-06
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYG 62
GS +G YG G+G G+GG G+G GG+G G G G G G+G G GYG
Sbjct: 87 GSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSG------GGGFGGGGFGGGGYG 140
Query: 63 CGSG 66
G G
Sbjct: 141 GGYG 144
Score = 39.3 bits (90), Expect = 7e-04
Identities = 25/58 (43%), Positives = 26/58 (44%)
Query: 11 GTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGCGSGSG 68
G+ G G GYG G YG G YGS G G R G G S G YG G G G
Sbjct: 516 GSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGG 573
Score = 36.6 bits (83), Expect = 0.004
Identities = 27/67 (40%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 7 GNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCG---YGYGSRSLCGYGYGC 63
G YG+ G + G GG YG GG G G G G G G YG G YG
Sbjct: 522 GGGYGSGGSSY-GSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGS 580
Query: 64 GSGSGYY 70
GS SG Y
Sbjct: 581 GSSSGGY 587
Score = 36.2 bits (82), Expect = 0.006
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCG 41
G G +G G G G+GG G+G GG G GYG C G
Sbjct: 112 GGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGYGPVCPPG 150
Score = 36.2 bits (82), Expect = 0.006
Identities = 31/67 (46%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYG-YGSRSLCGYGY 61
GSY G G G G GG YG G G YGS G G G+G YGS S G GY
Sbjct: 537 GSYGSGGGGGGGRGSYGSGGSSYGSG--GGSYGSGGG------GGGHGSYGSGSSSG-GY 587
Query: 62 GCGSGSG 68
GSG G
Sbjct: 588 RGGSGGG 594
Score = 33.1 bits (74), Expect = 0.048
Identities = 26/66 (39%), Positives = 28/66 (42%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYG 62
GS YG+ G+ G G G G YG G GY G G G G G S G G
Sbjct: 556 GSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGG 615
Query: 63 CGSGSG 68
GS SG
Sbjct: 616 RGSSSG 621
Score = 32.7 bits (73), Expect = 0.063
Identities = 27/62 (43%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 10 YGTPGYGFCGYGGLGYGYGGLG---CGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGCGSG 66
YG+ G + G GG YG GG G YGS G R G G G G S G G G GS
Sbjct: 552 YGSGGSSY-GSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSG-GGGGGSSGGRGSGGGSS 609
Query: 67 SG 68
G
Sbjct: 610 GG 611
Score = 32.0 bits (71), Expect = 0.11
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 14/55 (25%)
Query: 29 GLGCGYGSCCGCGFRRLGCGYGYGSRSLC--------------GYGYGCGSGSGY 69
G G G S CG G G G G+GSRSL G G G G G GY
Sbjct: 40 GGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGY 94
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 18/69 (26%)
Query: 15 YGFCGYGGLGYGYGGLGCGYGS---------------CCGCGFRRLGCGYGYGSRSLCGY 59
+ CG GG +G GG G+GS G R G G GYG G
Sbjct: 46 FSSCGGGGGSFGAGG---GFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGGG 102
Query: 60 GYGCGSGSG 68
G+G G G
Sbjct: 103 GFGGGGFGG 111
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 45.8 bits (107), Expect = 7e-06
Identities = 28/62 (45%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 7 GNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGCGSG 66
G G G GF G GG G G G GCGY G G+ GCG G G GCG G
Sbjct: 26 GGGSGGGGCGFFGGGGSGGGSSGSGCGYSG--GGGYSGGGCGGGSSGGGGGGGIGGCGGG 83
Query: 67 SG 68
SG
Sbjct: 84 SG 85
Score = 42.7 bits (99), Expect = 6e-05
Identities = 32/72 (44%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 2 CGSYYGNYYGTPGYGF-CGYGGLGYGYGGLGCGYGSCCGCGFRRL-GCGYGY-GSRSLCG 58
CG + G G G CGY G G GY G GCG GS G G + GCG G GS G
Sbjct: 34 CGFFGGGGSGGGSSGSGCGYSG-GGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSG 92
Query: 59 YGYGCGSGSGYY 70
G G GSG +
Sbjct: 93 GGGSSGGGSGCF 104
Score = 40.0 bits (92), Expect = 4e-04
Identities = 26/52 (50%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 19 GYGGLGYGYGGLGCGY--GSCCGCGFRRLGCGYGYGSRSLCGY-GYGCGSGS 67
G GG G G GG GCG+ G G G GCGY G GY G GCG GS
Sbjct: 21 GGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGG----GYSGGGCGGGS 68
Score = 32.7 bits (73), Expect = 0.063
Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 21/73 (28%)
Query: 10 YGTPGYGFCG-------YGGLGYGY---GGLGC---GYGSCCGCGFRRLGCGYGYGSRSL 56
+ + G GF G YGG+ G GG GC G G CG+ G G
Sbjct: 144 FSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSG-------- 195
Query: 57 CGYGYGCGSGSGY 69
CG G GSGSGY
Sbjct: 196 CGGGSSGGSGSGY 208
Score = 32.3 bits (72), Expect = 0.082
Identities = 24/59 (40%), Positives = 25/59 (42%), Gaps = 10/59 (16%)
Query: 20 YGGLGY---GYGGLGC----GYGSCCGCGFRRLGCGYG---YGSRSLCGYGYGCGSGSG 68
YGG G GG GC G G GCG G G G G S+CG G G G G
Sbjct: 225 YGGGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGGG 283
Score = 32.3 bits (72), Expect = 0.082
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 11 GTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGCG 64
G G CG G G G G + G GS CG G G G G S+ G G G G
Sbjct: 245 GGGGSSGCGGGSSGIGSGCIISGGGSVCGGG----SSGGGGGGSSVGGSGSGKG 294
Score = 30.0 bits (66), Expect = 0.41
Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 9 YYGTPGYGFCGYGGLGYGYGGLGCGYGSC---CGCGFRRLGCGYGYGSRSLC----GYGY 61
Y G GY G GG G GG G G G C G + G G G S C G G
Sbjct: 53 YSGGGGYSGGGCGGGSSGGGG-GGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGS 111
Query: 62 GCGSGSG 68
GC S G
Sbjct: 112 GCFSSGG 118
Score = 29.3 bits (64), Expect = 0.70
Identities = 27/81 (33%), Positives = 28/81 (34%), Gaps = 12/81 (14%)
Query: 2 CGSYYGNYYGTPGYGFCG---------YGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYG 52
CG G G G CG GG G GG GC G G G G G
Sbjct: 64 CGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSG 123
Query: 53 SRSLC---GYGYGCGSGSGYY 70
S C G G G GSG +
Sbjct: 124 GGSGCFSSGGGGSSGGGSGCF 144
Score = 29.3 bits (64), Expect = 0.70
Identities = 26/71 (36%), Positives = 27/71 (38%), Gaps = 18/71 (25%)
Query: 11 GTPGYGFCGYGGLGYGYGGLGCGYGSCCGCG--------FRRLGC----GYGYGSRSLCG 58
G G CGY G GG GCG GS G G + C YG GS G
Sbjct: 180 GGGGGSVCGYSG-----GGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGG 234
Query: 59 Y-GYGCGSGSG 68
G GC S G
Sbjct: 235 SGGSGCFSSGG 245
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 45.4 bits (106), Expect = 9e-06
Identities = 28/55 (50%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 16 GFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGY----GCGSG 66
G CG G G G G GCG G C GCG GCG G G CG G GCGSG
Sbjct: 8 GGCGSGCGGRGSGCGGCGSG-CGGCGSGCGGCGSGCGGCGGCGSGCAGCGGCGSG 61
Score = 37.0 bits (84), Expect = 0.003
Identities = 32/74 (43%), Positives = 32/74 (43%), Gaps = 25/74 (33%)
Query: 14 GYGFCGYG--GLGYGYGGL-GCGYGSCCGCGFRRLGCGYG----------------YGSR 54
G G CG G G G G GG GCG G C GCG GCG G S
Sbjct: 27 GCGGCGSGCGGCGSGCGGCGGCGSG-CAGCG----GCGSGCCVPVCCCKPMCCCVPACSC 81
Query: 55 SLCGYGYGCGSGSG 68
S CG G GCGS G
Sbjct: 82 SSCGKG-GCGSCGG 94
Score = 36.2 bits (82), Expect = 0.006
Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 2 CGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGY 61
CGS G+ G G CG G G G G G C CG + GCG S+S C
Sbjct: 109 CGSCGGS---KGGCGSCG--GSKGGCGSCGGSKGGCGSCGGSKGGCGSYGCSQSSCCKPC 163
Query: 62 GCGSGSG 68
C SG G
Sbjct: 164 CCSSGCG 170
Score = 35.8 bits (81), Expect = 0.007
Identities = 21/41 (51%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Query: 28 GGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGCGSGSG 68
G GC G GCG R GCG G S CG GCGSG G
Sbjct: 2 GCCGCSGGCGSGCGGRGSGCG---GCGSGCG---GCGSGCG 36
Score = 34.7 bits (78), Expect = 0.017
Identities = 31/94 (32%), Positives = 33/94 (35%), Gaps = 27/94 (28%)
Query: 2 CGSYYGNY-YGTPGYGFCGYGGLGYGYGGLGC----------------------GYGSCC 38
CGS G G G G CG G G G G GC G G C
Sbjct: 31 CGSGCGGCGSGCGGCGGCGSGCAGCGGCGSGCCVPVCCCKPMCCCVPACSCSSCGKGGCG 90
Query: 39 GCGFRRLG---CGYGYGSRSLCGYGY-GCGSGSG 68
CG + G CG G+ CG GCGS G
Sbjct: 91 SCGGSKRGCVSCGVSKGACGSCGGSKGGCGSCGG 124
Score = 34.7 bits (78), Expect = 0.017
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
Query: 2 CGSYYGNYYGTPGYGFCGYGGLGYGY-GGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYG 60
CGS G+ G C G+ G G G G C CG + GCG GS+ CG
Sbjct: 89 CGSCGGSKRG------CVSCGVSKGACGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSC 142
Query: 61 YGCGSGSGYY 70
G G G Y
Sbjct: 143 GGSKGGCGSY 152
Score = 31.2 bits (69), Expect = 0.18
Identities = 26/73 (35%), Positives = 29/73 (39%), Gaps = 14/73 (19%)
Query: 2 CGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCC-------GCGFR--RLGCGYGYG 52
CGS G+ G G CG G G G GC SCC GCG + C Y
Sbjct: 129 CGSCGGS---KGGCGSCG--GSKGGCGSYGCSQSSCCKPCCCSSGCGSSCCQSSCCKPYC 183
Query: 53 SRSLCGYGYGCGS 65
+S C Y C S
Sbjct: 184 CQSSCCKPYCCQS 196
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 44.3 bits (103), Expect = 2e-05
Identities = 28/66 (42%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 4 SYYGNYYGTPGYGFCGYGGLGYGY-GGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYG 62
S G +G GF G G GY GG G G+G G GF G GYG G G+G G
Sbjct: 84 SSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGF---GGGYGSGFGGFGGFGGG 140
Query: 63 CGSGSG 68
G G G
Sbjct: 141 AGGGDG 146
Score = 43.5 bits (101), Expect = 4e-05
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYG 62
GS+ +Y G G GF LG G+GG G+G G G+ G G+G G G G+G
Sbjct: 67 GSFGYSYGGGSGGGFSA-SSLGGGFGGGSRGFGGASGGGYSSSG-GFGGGFGGGSGGGFG 124
Query: 63 CGSGSGY 69
G GSG+
Sbjct: 125 GGYGSGF 131
Score = 40.4 bits (93), Expect = 3e-04
Identities = 29/71 (40%), Positives = 33/71 (46%), Gaps = 18/71 (25%)
Query: 7 GNYYGTPGYG-----FCGYGG---LGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCG 58
G + + GYG CG GG GY YGG GS G LG G+G GSR
Sbjct: 45 GRFSSSSGYGGGSSRVCGRGGGGSFGYSYGG-----GSGGGFSASSLGGGFGGGSR---- 95
Query: 59 YGYGCGSGSGY 69
G+G SG GY
Sbjct: 96 -GFGGASGGGY 105
Score = 40.4 bits (93), Expect = 3e-04
Identities = 30/63 (47%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 7 GNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFR-RLGCGYGYGSRSLCGYGYGCGS 65
G G+ G G G G YG GG G GYG G G R G YG GS S G G G G
Sbjct: 479 GGSGGSYGRGSRGGSGGSYGGGGSGGGYGG--GSGSRGGSGGSYGGGSGSGGGSGGGYGG 536
Query: 66 GSG 68
GSG
Sbjct: 537 GSG 539
Score = 40.0 bits (92), Expect = 4e-04
Identities = 29/67 (43%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYG 62
G G Y G G G G G G+ GG G YG G G G GYG GS S G G
Sbjct: 528 GGSGGGYGGGSGGGHSGGSGGGHS-GGSGGNYGGGSGSGGGS-GGGYGGGSGSRGGSGGS 585
Query: 63 CGSGSGY 69
G GSG+
Sbjct: 586 HGGGSGF 592
Score = 38.1 bits (87), Expect = 0.001
Identities = 28/64 (43%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 10 YGTPGYGFCGYGGLG-----YGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGCG 64
+ + G G G GG G YG G G G G G G G G G GSR G YG G
Sbjct: 465 FESSGAGKIGLGGRGGSGGSYGRGSRG-GSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGG 523
Query: 65 SGSG 68
SGSG
Sbjct: 524 SGSG 527
Score = 38.1 bits (87), Expect = 0.001
Identities = 31/67 (46%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYG 62
GSY G G G G GG G GYGG G GS G G G G GS G GYG
Sbjct: 483 GSYGRGSRGGSG-GSYGGGGSGGGYGG---GSGSRGGSGG---SYGGGSGSGGGSGGGYG 535
Query: 63 CGSGSGY 69
GSG G+
Sbjct: 536 GGSGGGH 542
Score = 38.1 bits (87), Expect = 0.001
Identities = 28/70 (40%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRR-LGCGYGYGSRSLCGYGY 61
G YG G+ G YGG GG G GYG G G G G+ GS G G
Sbjct: 503 GGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGS 562
Query: 62 GCGSGSGYYY 71
G G GSG Y
Sbjct: 563 GSGGGSGGGY 572
Score = 37.7 bits (86), Expect = 0.002
Identities = 31/70 (44%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLG-----CGYGYGSRSLC 57
G G+Y G G G GG G GYGG G G G G G G G G GS
Sbjct: 514 GGSGGSYGGGSGSG----GGSGGGYGG-GSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGS 568
Query: 58 GYGYGCGSGS 67
G GYG GSGS
Sbjct: 569 GGGYGGGSGS 578
Score = 36.2 bits (82), Expect = 0.006
Identities = 27/66 (40%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYG 62
G YG G+ G GYGG G G G G G G G G G G S GYG G
Sbjct: 517 GGSYGGGSGSGGGSGGGYGG-GSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGG 575
Query: 63 CGSGSG 68
GS G
Sbjct: 576 SGSRGG 581
Score = 36.2 bits (82), Expect = 0.006
Identities = 25/64 (39%), Positives = 27/64 (42%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYG 62
G YG G+ G GYGG GG G +G G G G G S G GYG
Sbjct: 555 GGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYG 614
Query: 63 CGSG 66
GSG
Sbjct: 615 GGSG 618
Score = 31.6 bits (70), Expect = 0.14
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 11/76 (14%)
Query: 2 CGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGY------GSCCGCGFRRLGCGYGYGSRS 55
C + +Y G G G GGLG G G + Y G G G GYG GS
Sbjct: 3 CRQFSSSYLSRSGGG--GGGGLGSG-GSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSR 59
Query: 56 LCGYGYGCGSGSGYYY 71
+CG G G GY Y
Sbjct: 60 VCGRGGG--GSFGYSY 73
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGG 29
G G + G G GF G+GG G G GG
Sbjct: 117 GGSGGGFGGGYGSGFGGFGGFGGGAGG 143
>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
Length = 589
Score = 43.9 bits (102), Expect = 3e-05
Identities = 32/67 (47%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYG 62
G Y G+ G G GYGG GYGG GYG G G+ GYG G RS GYG
Sbjct: 474 GGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRG-GYGGDRGGYG-GDRSRGGYGGD 531
Query: 63 CGSGSGY 69
G GSGY
Sbjct: 532 RGGGSGY 538
Score = 33.5 bits (75), Expect = 0.037
Identities = 34/73 (46%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 3 GSYYGNYYGTPGYGFC----GYGG-LGYGYGG-LGCGYGSCCGCGFRRLGCGYGYGSRSL 56
G Y G+ G GYG GYGG G GYGG G GYG G G+ GYG G R
Sbjct: 432 GGYSGDRSGG-GYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYG-GDR-- 487
Query: 57 CGYGYGCGSGSGY 69
G GYG G GY
Sbjct: 488 -GGGYG-GDRGGY 498
Score = 32.3 bits (72), Expect = 0.082
Identities = 32/78 (41%), Positives = 33/78 (42%), Gaps = 13/78 (16%)
Query: 3 GSYYGNYYGTPGYGFCG-----YGG--LGYGYGG---LGCGY-GSCCGCGFRRLGCGYGY 51
G YG G G G G YGG G GYGG G GY G G G+ G GY
Sbjct: 393 GRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGY 452
Query: 52 GSRSLCGYGYGCGSGSGY 69
G G GYG G GY
Sbjct: 453 GGDR--GGGYGGDRGGGY 468
Score = 30.0 bits (66), Expect = 0.41
Identities = 27/76 (35%), Positives = 28/76 (36%), Gaps = 15/76 (19%)
Query: 6 YGNYYGTPGYGFCGYGGLGYGYGGL------------GCGYGSCCGCGFRRLGCGYGYGS 53
YG G G GYGG GYGG G GYG G+ G GYG
Sbjct: 498 YGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGG 557
Query: 54 RSLCGYGYGCGSGSGY 69
GYG G GY
Sbjct: 558 DRGGGYG---GDRGGY 570
Score = 28.5 bits (62), Expect = 1.2
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYG 50
G Y G+ G GYG G GYG G GYG G G+ GYG
Sbjct: 526 GGYGGDRGGGSGYGGDRSG--GYGGDRSGGGYGGDRGGGYGGDRGGYG 571
>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
Length = 592
Score = 43.9 bits (102), Expect = 3e-05
Identities = 32/67 (47%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYG 62
G Y G+ G G GYGG GYGG GYG G G+ GYG G RS GYG
Sbjct: 477 GGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRG-GYGGDRGGYG-GDRSRGGYGGD 534
Query: 63 CGSGSGY 69
G GSGY
Sbjct: 535 RGGGSGY 541
Score = 33.5 bits (75), Expect = 0.037
Identities = 34/73 (46%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 3 GSYYGNYYGTPGYGFC----GYGG-LGYGYGG-LGCGYGSCCGCGFRRLGCGYGYGSRSL 56
G Y G+ G GYG GYGG G GYGG G GYG G G+ GYG G R
Sbjct: 435 GGYSGDRSGG-GYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYG-GDR-- 490
Query: 57 CGYGYGCGSGSGY 69
G GYG G GY
Sbjct: 491 -GGGYG-GDRGGY 501
Score = 32.3 bits (72), Expect = 0.082
Identities = 32/78 (41%), Positives = 33/78 (42%), Gaps = 13/78 (16%)
Query: 3 GSYYGNYYGTPGYGFCG-----YGG--LGYGYGG---LGCGY-GSCCGCGFRRLGCGYGY 51
G YG G G G G YGG G GYGG G GY G G G+ G GY
Sbjct: 396 GRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGY 455
Query: 52 GSRSLCGYGYGCGSGSGY 69
G G GYG G GY
Sbjct: 456 GGDR--GGGYGGDRGGGY 471
Score = 30.0 bits (66), Expect = 0.41
Identities = 27/76 (35%), Positives = 28/76 (36%), Gaps = 15/76 (19%)
Query: 6 YGNYYGTPGYGFCGYGGLGYGYGGL------------GCGYGSCCGCGFRRLGCGYGYGS 53
YG G G GYGG GYGG G GYG G+ G GYG
Sbjct: 501 YGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGG 560
Query: 54 RSLCGYGYGCGSGSGY 69
GYG G GY
Sbjct: 561 DRGGGYG---GDRGGY 573
Score = 28.5 bits (62), Expect = 1.2
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYG 50
G Y G+ G GYG G GYG G GYG G G+ GYG
Sbjct: 529 GGYGGDRGGGSGYGGDRSG--GYGGDRSGGGYGGDRGGGYGGDRGGYG 574
>gi|194018511 keratin 77 [Homo sapiens]
Length = 578
Score = 42.0 bits (97), Expect = 1e-04
Identities = 29/68 (42%), Positives = 32/68 (47%), Gaps = 17/68 (25%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYG 62
G+ G YG+ GYG GG G GYGG G +R G G RS GYG G
Sbjct: 499 GAGGGGSYGSGGYG----GGSGGGYGG---------GRSYR----GGGARGRSGGGYGSG 541
Query: 63 CGSGSGYY 70
CG G G Y
Sbjct: 542 CGGGGGSY 549
Score = 35.8 bits (81), Expect = 0.007
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 8 NYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRR---LGCGYGYGSRSLCGYGYGCG 64
N G GFC GG+G GG G G GS GF G G+G + L G+G C
Sbjct: 73 NLMGRSTSGFCQGGGVGGFGGGRGFGVGSTGAGGFGGGGFGGAGFGTSNFGLGGFGPYCP 132
Query: 65 SG 66
G
Sbjct: 133 PG 134
Score = 26.9 bits (58), Expect = 3.5
Identities = 26/89 (29%), Positives = 30/89 (33%), Gaps = 27/89 (30%)
Query: 7 GNYYGTPGYGFCGY-----GGLGYGYGGLGCGY----------------------GSCCG 39
G+ G+P G Y GG GYG G G G G C G
Sbjct: 26 GSGGGSPAVGSVCYARGRCGGGGYGIHGRGFGSRSLYNLGGSRSISINLMGRSTSGFCQG 85
Query: 40 CGFRRLGCGYGYGSRSLCGYGYGCGSGSG 68
G G G G+G S G+G G G
Sbjct: 86 GGVGGFGGGRGFGVGSTGAGGFGGGGFGG 114
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLG 31
GS +G G+G G+G +G GG G
Sbjct: 100 GSTGAGGFGGGGFGGAGFGTSNFGLGGFG 128
>gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b
[Homo sapiens]
Length = 372
Score = 42.0 bits (97), Expect = 1e-04
Identities = 33/81 (40%), Positives = 37/81 (45%), Gaps = 19/81 (23%)
Query: 6 YGNYYGTPGYGFC-----------GYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSR 54
+G G GYG GYGG G GY G GYGS G G+ G GYG GS
Sbjct: 228 FGGSRGGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSRGYGS-GGQGYGNQGSGYG-GSG 285
Query: 55 SLCGY------GYGCGSGSGY 69
S Y G+G GSGS +
Sbjct: 286 SYDSYNNGGGGGFGGGSGSNF 306
Score = 41.2 bits (95), Expect = 2e-04
Identities = 31/69 (44%), Positives = 34/69 (49%), Gaps = 13/69 (18%)
Query: 7 GNYYGTPGYGFC----GYGGLGYGYGGLG--CGYGSCCGCGFRRLGCGYGYGSRSLCGYG 60
GN+ G G+G GYGG G GY G G GYG G G+ GYG G G G
Sbjct: 220 GNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGGYGG-GGPGYSGGSRGYGSG-----GQG 273
Query: 61 YGCGSGSGY 69
YG GSGY
Sbjct: 274 YG-NQGSGY 281
Score = 40.0 bits (92), Expect = 4e-04
Identities = 28/69 (40%), Positives = 29/69 (42%), Gaps = 9/69 (13%)
Query: 3 GSYYGNYYGTPGY--GFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYG 60
G Y G G PGY G GYG G GYG G GYG G G G+G G G
Sbjct: 251 GGYGG---GGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGFGG----GSG 303
Query: 61 YGCGSGSGY 69
G G Y
Sbjct: 304 SNFGGGGSY 312
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/63 (26%), Positives = 24/63 (38%)
Query: 7 GNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGCGSG 66
G YG G G+ G G G G G+G G F G +G+ + +G G
Sbjct: 271 GQGYGNQGSGYGGSGSYDSYNNGGGGGFGGGSGSNFGGGGSYNDFGNYNNQSSNFGPMKG 330
Query: 67 SGY 69
+
Sbjct: 331 GNF 333
>gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isoform
B1 [Homo sapiens]
Length = 353
Score = 42.0 bits (97), Expect = 1e-04
Identities = 26/56 (46%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 7 GNYYGTPGYGFC--GYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYG 60
GN+ G+PGYG GYGG G GYG G GYG G+ G G YGS + +G
Sbjct: 254 GNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGG----GYDNYG-GGNYGSGNYNDFG 304
Score = 39.7 bits (91), Expect = 5e-04
Identities = 27/64 (42%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 3 GSYYGNYYGTPGYG-FCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGY 61
G Y Y G PG G F G G G G GG G G G G+ G GYG G + G Y
Sbjct: 241 GDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGG-----GPGYGNQGGGYGGGYDNYGGGNY 295
Query: 62 GCGS 65
G G+
Sbjct: 296 GSGN 299
Score = 33.9 bits (76), Expect = 0.028
Identities = 28/80 (35%), Positives = 31/80 (38%), Gaps = 17/80 (21%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLG---------CGYGSCCGCGF---RRLGCGYG 50
G YGN G G G+ YGG YG G YG F R +G YG
Sbjct: 273 GPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYG 332
Query: 51 YGSRSLCGYGYGCGSGSGYY 70
G+ YG G GSG Y
Sbjct: 333 GGN-----YGPGGSGGSGGY 347
Score = 30.8 bits (68), Expect = 0.24
Identities = 30/72 (41%), Positives = 35/72 (48%), Gaps = 13/72 (18%)
Query: 11 GTPGYGF---CGYGGLGYGYGGLGCGYGSCCGCGFRRLGC---GYGYGSRSLCGYG---- 60
G+ GYG G G GYG G G +G G G R G G GYG++ GYG
Sbjct: 230 GSDGYGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQG-GGYGGGYD 288
Query: 61 -YGCGS-GSGYY 70
YG G+ GSG Y
Sbjct: 289 NYGGGNYGSGNY 300
Score = 30.0 bits (66), Expect = 0.41
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 16 GFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGY-GYGCGSGSGYY 70
G G+G G G G G GS FR GYG G GY GYG G G G +
Sbjct: 205 GNFGFGDSRGGGGNFGPGPGS----NFRGGSDGYGSGRGFGDGYNGYGGGPGGGNF 256
Score = 27.3 bits (59), Expect = 2.6
Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 11 GTPGYGFCGYGGLGYGYG------GLGCGYGSCCGCGFRRLGCGYGYGSRSLCGY-GYGC 63
G G+G GG +G G G GYGS G G G G G G + G GYG
Sbjct: 205 GNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGGSPGYGG 264
Query: 64 GSGSGY 69
G G GY
Sbjct: 265 GRG-GY 269
>gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform A2
[Homo sapiens]
Length = 341
Score = 42.0 bits (97), Expect = 1e-04
Identities = 26/56 (46%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 7 GNYYGTPGYGFC--GYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYG 60
GN+ G+PGYG GYGG G GYG G GYG G+ G G YGS + +G
Sbjct: 242 GNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGG----GYDNYG-GGNYGSGNYNDFG 292
Score = 39.7 bits (91), Expect = 5e-04
Identities = 27/64 (42%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 3 GSYYGNYYGTPGYG-FCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGY 61
G Y Y G PG G F G G G G GG G G G G+ G GYG G + G Y
Sbjct: 229 GDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGG-----GPGYGNQGGGYGGGYDNYGGGNY 283
Query: 62 GCGS 65
G G+
Sbjct: 284 GSGN 287
Score = 33.9 bits (76), Expect = 0.028
Identities = 28/80 (35%), Positives = 31/80 (38%), Gaps = 17/80 (21%)
Query: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLG---------CGYGSCCGCGF---RRLGCGYG 50
G YGN G G G+ YGG YG G YG F R +G YG
Sbjct: 261 GPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYG 320
Query: 51 YGSRSLCGYGYGCGSGSGYY 70
G+ YG G GSG Y
Sbjct: 321 GGN-----YGPGGSGGSGGY 335
Score = 30.8 bits (68), Expect = 0.24
Identities = 30/72 (41%), Positives = 35/72 (48%), Gaps = 13/72 (18%)
Query: 11 GTPGYGF---CGYGGLGYGYGGLGCGYGSCCGCGFRRLGC---GYGYGSRSLCGYG---- 60
G+ GYG G G GYG G G +G G G R G G GYG++ GYG
Sbjct: 218 GSDGYGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQG-GGYGGGYD 276
Query: 61 -YGCGS-GSGYY 70
YG G+ GSG Y
Sbjct: 277 NYGGGNYGSGNY 288
Score = 30.0 bits (66), Expect = 0.41
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 16 GFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGY-GYGCGSGSGYY 70
G G+G G G G G GS FR GYG G GY GYG G G G +
Sbjct: 193 GNFGFGDSRGGGGNFGPGPGS----NFRGGSDGYGSGRGFGDGYNGYGGGPGGGNF 244
Score = 27.3 bits (59), Expect = 2.6
Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 11 GTPGYGFCGYGGLGYGYG------GLGCGYGSCCGCGFRRLGCGYGYGSRSLCGY-GYGC 63
G G+G GG +G G G GYGS G G G G G G + G GYG
Sbjct: 193 GNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGGSPGYGG 252
Query: 64 GSGSGY 69
G G GY
Sbjct: 253 GRG-GY 257
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 42.0 bits (97), Expect = 1e-04
Identities = 28/53 (52%), Positives = 28/53 (52%), Gaps = 10/53 (18%)
Query: 16 GFCGY-GGLGYGYGGLGCGYGSC-CGCGFRRLGCGYGYGSRSLCGYGY-GCGS 65
G CG GG G G GG G G G C GCG GCG G G CG G GCGS
Sbjct: 2 GCCGCSGGCGSGCGGCGSGCGGCGSGCG----GCGSGCGG---CGSGCGGCGS 47
Score = 40.4 bits (93), Expect = 3e-04
Identities = 30/79 (37%), Positives = 33/79 (41%), Gaps = 15/79 (18%)
Query: 2 CGSYYGNYYGTPGYGFCG--------YGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGS 53
CGS G+ GYG CG GG G G G G C CG + GCG GS
Sbjct: 71 CGSCGGS---KGGYGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGS 127
Query: 54 RSLC----GYGYGCGSGSG 68
+ C G GCGS G
Sbjct: 128 KGGCVSCGGSKGGCGSCGG 146
Score = 38.1 bits (87), Expect = 0.001
Identities = 27/75 (36%), Positives = 30/75 (40%), Gaps = 14/75 (18%)
Query: 2 CGSYYGNYYGTPGYGFCG--------YGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGS 53
CGS G+ G G CG GG G G G G C CG + GCG GS
Sbjct: 111 CGSCGGS---KGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGS 167
Query: 54 RSLCGYGYGCGSGSG 68
+ CG CG G
Sbjct: 168 KGGCG---SCGGSKG 179
Score = 35.8 bits (81), Expect = 0.007
Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 2 CGSYYGNYYGTPGYGFC--GYGGLGYGYGG-LGCG--YGSCCGCGFRRLGCGYGYGSRSL 56
CGS G+ G G G G G GG + CG G C CG + GCG GS+
Sbjct: 121 CGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGG 180
Query: 57 CGYGYGCGSGSG 68
CG CG G
Sbjct: 181 CG---SCGGSKG 189
Score = 34.3 bits (77), Expect = 0.022
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 2 CGSYYGNYYGTPGY-GFCGY-GGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGY 59
CG G G G CG GG G G G G C CG + GC GS+ CG
Sbjct: 84 CGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKGGCG- 142
Query: 60 GYGCGSGSG 68
CG G
Sbjct: 143 --SCGGSKG 149
Score = 34.3 bits (77), Expect = 0.022
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 7 GNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGCGSG 66
G+ G+ G G GG G G G G C CG + GCG GS+ CG GC
Sbjct: 142 GSCGGSKG-GCVSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCG-SCGCSQC 199
Query: 67 S 67
S
Sbjct: 200 S 200
Score = 33.9 bits (76), Expect = 0.028
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 2 CGSYYGNYYGTPGY-GFCGY-GGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGY 59
CG G G G CG GG G G G G C CG + GCG S+ C
Sbjct: 144 CGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCK 203
Query: 60 GYGCGSGSG 68
C SG G
Sbjct: 204 PCCCSSGCG 212
Score = 33.5 bits (75), Expect = 0.037
Identities = 28/75 (37%), Positives = 30/75 (40%), Gaps = 9/75 (12%)
Query: 2 CGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYG----SCCG--CGFRRLGCGYGYGSRS 55
CGS G G G GG G G GG G G G SCC C + + C S S
Sbjct: 10 CGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCS 69
Query: 56 LCGYGYGCGSGSGYY 70
CG CG G Y
Sbjct: 70 SCG---SCGGSKGGY 81
Score = 32.7 bits (73), Expect = 0.063
Identities = 29/90 (32%), Positives = 31/90 (34%), Gaps = 23/90 (25%)
Query: 2 CGSYYGNYYGTPGYGFCGYGGLGYGYGGLG-------------------CGYGSCCGCGF 42
CGS G G G GG G G GG G C SC CG
Sbjct: 17 CGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGG 76
Query: 43 RRLGCGYGYGSRSLC----GYGYGCGSGSG 68
+ G G GS+ C G GCGS G
Sbjct: 77 SKGGYGSCGGSKGGCVSCGGSKGGCGSCGG 106
Score = 31.2 bits (69), Expect = 0.18
Identities = 19/38 (50%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 32 CGYGSCCGCGFRRLGCGYGYGSRSLCGYGY-GCGSGSG 68
CG CG G GCG G G CG G GCGSG G
Sbjct: 4 CGCSGGCGSGCG--GCGSGCGG---CGSGCGGCGSGCG 36
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 41.6 bits (96), Expect = 1e-04
Identities = 29/65 (44%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 2 CGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGY 61
CGS G G G G G GG G G G G C GCG GCG G S CG
Sbjct: 32 CGSCCG--CGGSGCGGSGCGGSCCGSSCCGSGCGGCGGCG----GCGGGCCGSSCCGSSC 85
Query: 62 GCGSG 66
CGSG
Sbjct: 86 -CGSG 89
Score = 39.3 bits (90), Expect = 7e-04
Identities = 25/55 (45%), Positives = 25/55 (45%), Gaps = 11/55 (20%)
Query: 16 GFCGYGGLGYGYGGLGCG----YGSCCGCGFRRLGCGYGYGSRSLCGYGYGCGSG 66
G CG G G GG GCG GSCCG CG G G CG GCG G
Sbjct: 27 GCCGCCGSCCGCGGSGCGGSGCGGSCCGSSC----CGSGCGGCGGCG---GCGGG 74
Score = 33.1 bits (74), Expect = 0.048
Identities = 21/45 (46%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 28 GGLGCGYGSCCGCG---FRRLGCGYGYGSRSLCGYGY-GCGSGSG 68
G GC GSCCGCG GCG S CG G GCG G
Sbjct: 27 GCCGC-CGSCCGCGGSGCGGSGCGGSCCGSSCCGSGCGGCGGCGG 70
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Query: 32 CGYGSCCGCGFRRLGCG----YGYGSRSLCGYGYGCGSGSG 68
C CCGC GCG G G C CGSG G
Sbjct: 23 CCQPGCCGCCGSCCGCGGSGCGGSGCGGSCCGSSCCGSGCG 63
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 2 CGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCG 39
CGS G G G G CG G G G C CCG
Sbjct: 58 CGSGCG---GCGGCGGCGGGCCGSSCCGSSCCGSGCCG 92
Score = 27.7 bits (60), Expect = 2.0
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 14 GYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGC 47
G G G GG G G GG GC SCCG GC
Sbjct: 59 GSGCGGCGGCG-GCGG-GCCGSSCCGSSCCGSGC 90
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.160 0.606
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,248,703
Number of Sequences: 37866
Number of extensions: 222171
Number of successful extensions: 2536
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 821
Number of HSP's gapped (non-prelim): 709
length of query: 71
length of database: 18,247,518
effective HSP length: 44
effective length of query: 27
effective length of database: 16,581,414
effective search space: 447698178
effective search space used: 447698178
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.