Guide to the Human Genome
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Name: MUM1 Sequence: fasta or formatted (711aa) NCBI GI: 31652259
Description:

melanoma ubiquitous mutated protein

Referenced in:

B cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         54           2
 C cysteine            2.7         19           1
 D aspartate           4.9         35           2
 E glutamate           8.3         59           2
 F phenylalanine       1.7         12           1
 G glycine             6.6         47           3
 H histidine           1.8         13           2
 I isoleucine          3.1         22           2
 K lysine              7.2         51           2
 L leucine             9.3         66           2
 M methionine          1.5         11           2
 N asparagine          2.3         16           1
 P proline             7.6         54           3
 Q glutamine           4.1         29           2
 R arginine            7.9         56           4
 S serine             10.8         77           3
 T threonine           3.0         21           1
 V valine              5.9         42           2
 W tryptophan          1.3          9           1
 Y tyrosine            2.5         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma ubiquitous mutated protein 
MUM1L1                0.310   melanoma associated antigen (mutated) 1-like 1 [Homo...
LOC728317             0.221   PREDICTED: hypothetical protein 
LOC728317             0.221   PREDICTED: hypothetical protein 
LOC728307             0.221   PREDICTED: hypothetical protein 
LOC728317             0.221   PREDICTED: hypothetical protein 
YLPM1                 0.018   YLP motif containing 1 
CASKIN1               0.017   CASK interacting protein 1 
RBM27                 0.016   RNA binding motif protein 27 
OGFR                  0.015   opioid growth factor receptor 
PRR12                 0.015   proline rich 12 
SYNJ1                 0.014   synaptojanin 1 isoform d 
CDKN1C                0.013   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.013   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.013   cyclin-dependent kinase inhibitor 1C isoform a 
TAF4                  0.013   TBP-associated factor 4 
AMOT                  0.013   angiomotin isoform 2 
AMOT                  0.013   angiomotin isoform 1 
SETD1A                0.013   SET domain containing 1A 
TTBK1                 0.013   tau tubulin kinase 1 
C9orf86               0.013   Rab-like GTP-binding protein 1 isoform 1 
MAMSTR                0.012   MEF2 activating motif and SAP domain containing tra...
MAMSTR                0.012   MEF2 activating motif and SAP domain containing tran...
PELP1                 0.012   proline, glutamic acid and leucine rich protein 1 [...
IRX3                  0.012   iroquois homeobox 3 
SAMD1                 0.012   sterile alpha motif domain containing 1 
PLCH2                 0.012   phospholipase C, eta 2 
FGD1                  0.012   faciogenital dysplasia protein 
WNK2                  0.011   WNK lysine deficient protein kinase 2 
MARCH11               0.011   membrane-associated ring finger (C3HC4) 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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