LOC728307 1335

Name: LOC728307	Sequence: fasta or formatted (1934aa)		NCBI GI: 113430175
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.4 260 3 C cysteine 2.0 38 1 D aspartate 5.0 97 3 E glutamate 2.8 55 3 F phenylalanine 1.0 20 1 G glycine 9.4 181 3 H histidine 2.8 55 2 I isoleucine 4.8 92 2 K lysine 4.7 90 2 L leucine 7.4 143 3 M methionine 1.1 22 1 N asparagine 1.2 24 1 P proline 9.9 192 2 Q glutamine 2.2 43 1 R arginine 10.5 203 2 S serine 9.2 178 3 T threonine 7.2 139 2 V valine 3.1 59 2 W tryptophan 1.2 23 1 Y tyrosine 1.0 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC728317 0.972 PREDICTED: hypothetical protein LOC728317 0.911 PREDICTED: hypothetical protein LOC728317 0.910 PREDICTED: hypothetical protein MUM1 0.080 melanoma ubiquitous mutated protein MUM1L1 0.075 melanoma associated antigen (mutated) 1-like 1 [Homo... SRRM2 0.020 splicing coactivator subunit SRm300 NACA 0.016 nascent polypeptide-associated complex alpha subuni... LOC100133756 0.014 PREDICTED: hypothetical protein, partial MUC12 0.014 PREDICTED: mucin 12 MUC5B 0.012 mucin 5, subtype B, tracheobronchial COL3A1 0.011 collagen type III alpha 1 preproprotein SRCAP 0.011 Snf2-related CBP activator protein LOC100130716 0.010 PREDICTED: similar to mucin 11 FLJ22184 0.010 PREDICTED: hypothetical protein FLJ22184 MUC5AC 0.010 mucin 5AC MUC12 0.010 PREDICTED: mucin 12, cell surface associated LOC100133714 0.009 PREDICTED: similar to Mucin-12, partial IRS2 0.009 insulin receptor substrate 2 MUC12 0.009 PREDICTED: mucin 12 FLJ31945 0.009 PREDICTED: hypothetical protein FLJ31945 0.009 PREDICTED: hypothetical protein MUC6 0.008 mucin 6, gastric FLJ22184 0.008 PREDICTED: hypothetical protein FLJ22184 COL27A1 0.008 collagen, type XXVII, alpha 1 LOC100130716 0.008 PREDICTED: similar to Mucin-12 TPRX1 0.008 tetra-peptide repeat homeobox LOC100293409 0.007 PREDICTED: similar to Mucin-19 LOC100291118 0.007 PREDICTED: hypothetical protein XP_002347351 LOC100287737 0.007 PREDICTED: hypothetical protein XP_002343203 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.