Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MAMSTR Sequence: fasta or formatted (312aa) NCBI GI: 32698970
Description:

MEF2 activating motif and SAP domain containing transcriptional regulator isoform 2

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [415aa] MEF2 activating motif and SAP domain containing transcriptional r...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         27           3
 C cysteine            0.3          1           1
 D aspartate           6.1         19           2
 E glutamate           6.1         19           3
 F phenylalanine       1.3          4           1
 G glycine             7.1         22           2
 H histidine           1.0          3           1
 I isoleucine          1.6          5           1
 K lysine              2.6          8           1
 L leucine            11.9         37           2
 M methionine          1.3          4           1
 N asparagine          0.6          2           1
 P proline            19.9         62           4
 Q glutamine           3.5         11           2
 R arginine            7.1         22           2
 S serine             13.1         41           4
 T threonine           4.2         13           1
 V valine              2.2          7           1
 W tryptophan          1.6          5           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MEF2 activating motif and SAP domain containing tran... 
MAMSTR                1.000   MEF2 activating motif and SAP domain containing tra...
PER1                  0.070   period 1 
WIPF1                 0.060   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.060   WAS/WASL interacting protein family, member 1 
BAT2                  0.052   HLA-B associated transcript-2 
RAPH1                 0.052   Ras association and pleckstrin homology domains 1 is...
MYOCD                 0.052   myocardin isoform 1 
MYOCD                 0.052   myocardin isoform 2 
MKL1                  0.052   megakaryoblastic leukemia 1 protein 
ATXN2                 0.052   ataxin 2 
MYOCD                 0.052   myocardin isoform 3 
MLL2                  0.052   myeloid/lymphoid or mixed-lineage leukemia 2 
NACA                  0.049   nascent polypeptide-associated complex alpha subuni...
MUC2                  0.047   mucin 2 precursor 
SH3BP1                0.047   SH3-domain binding protein 1 
FLJ22184              0.047   PREDICTED: hypothetical protein FLJ22184 
DGKK                  0.045   diacylglycerol kinase kappa 
MLL4                  0.045   myeloid/lymphoid or mixed-lineage leukemia 4 
BCORL1                0.044   BCL6 co-repressor-like 1 
FLJ22184              0.044   PREDICTED: hypothetical protein LOC80164 
RERE                  0.044   atrophin-1 like protein isoform b 
RERE                  0.044   atrophin-1 like protein isoform a 
RERE                  0.044   atrophin-1 like protein isoform a 
CDKN1C                0.042   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.042   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.042   cyclin-dependent kinase inhibitor 1C isoform a 
WIPF3                 0.041   WAS/WASL interacting protein family, member 3 [Homo...
SFPQ                  0.041   splicing factor proline/glutamine rich (polypyrimidin...
SRRM1                 0.041   serine/arginine repetitive matrix 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press