Guide to the Human Genome
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Name: MAMSTR Sequence: fasta or formatted (415aa) NCBI GI: 195963410
Description:

MEF2 activating motif and SAP domain containing transcriptional regulator isoform 1

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [312aa] MEF2 activating motif and SAP domain containing transcriptional r...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         33           3
 C cysteine            0.5          2           1
 D aspartate           5.3         22           2
 E glutamate           5.8         24           3
 F phenylalanine       1.7          7           1
 G glycine             6.0         25           2
 H histidine           1.2          5           1
 I isoleucine          2.7         11           2
 K lysine              3.1         13           2
 L leucine            11.1         46           2
 M methionine          1.2          5           1
 N asparagine          1.0          4           1
 P proline            18.6         77           4
 Q glutamine           4.3         18           2
 R arginine            7.7         32           2
 S serine             13.3         55           4
 T threonine           3.9         16           1
 V valine              2.2          9           1
 W tryptophan          1.9          8           1
 Y tyrosine            0.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MEF2 activating motif and SAP domain containing tra... 
MAMSTR                0.743   MEF2 activating motif and SAP domain containing tran...
PER1                  0.052   period 1 
WIPF1                 0.047   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.047   WAS/WASL interacting protein family, member 1 
MYOCD                 0.046   myocardin isoform 1 
MYOCD                 0.046   myocardin isoform 2 
MKL1                  0.046   megakaryoblastic leukemia 1 protein 
MYOCD                 0.046   myocardin isoform 3 
GLTSCR1               0.045   glioma tumor suppressor candidate region gene 1 [Ho...
NACA                  0.043   nascent polypeptide-associated complex alpha subuni...
MLL2                  0.041   myeloid/lymphoid or mixed-lineage leukemia 2 
BAT2                  0.041   HLA-B associated transcript-2 
FBXO42                0.040   F-box protein 42 
ATXN2                 0.039   ataxin 2 
RAPH1                 0.039   Ras association and pleckstrin homology domains 1 is...
PRG4                  0.036   proteoglycan 4 isoform D 
PRG4                  0.036   proteoglycan 4 isoform C 
PRG4                  0.036   proteoglycan 4 isoform B 
PRG4                  0.036   proteoglycan 4 isoform A 
PPP1R13L              0.036   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.036   protein phosphatase 1, regulatory subunit 13 like [H...
FLJ22184              0.036   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.036   PREDICTED: hypothetical protein LOC80164 
MUC2                  0.035   mucin 2 precursor 
SETD1A                0.035   SET domain containing 1A 
MLL4                  0.035   myeloid/lymphoid or mixed-lineage leukemia 4 
SRRM1                 0.035   serine/arginine repetitive matrix 1 
FLJ22184              0.035   PREDICTED: hypothetical protein FLJ22184 
SFPQ                  0.035   splicing factor proline/glutamine rich (polypyrimidin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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