Guide to the Human Genome
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Name: PLCH2 Sequence: fasta or formatted (1416aa) NCBI GI: 78499633
Description:

phospholipase C, eta 2

Referenced in:

Calmodulin and Calcium
Inositol Pathways
Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         95           3
 C cysteine            1.7         24           2
 D aspartate           5.9         83           3
 E glutamate           6.1         86           3
 F phenylalanine       2.7         38           1
 G glycine             9.1        129           2
 H histidine           2.1         30           3
 I isoleucine          3.3         47           2
 K lysine              4.7         67           3
 L leucine             8.8        125           2
 M methionine          2.1         30           2
 N asparagine          2.6         37           2
 P proline             8.1        114           4
 Q glutamine           5.0         71           3
 R arginine            7.5        106           2
 S serine             10.2        144           5
 T threonine           4.2         60           2
 V valine              6.0         85           2
 W tryptophan          1.2         17           1
 Y tyrosine            2.0         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase C, eta 2 
PLCH1                 0.418   phospholipase C eta 1 isoform b 
PLCH1                 0.417   phospholipase C eta 1 isoform c 
PLCH1                 0.417   phospholipase C eta 1 isoform a 
PLCL2                 0.125   phospholipase C-like 2 isoform 1 
PLCL2                 0.125   phospholipase C-like 2 isoform 2 
PLCL1                 0.114   phospholipase C-like 1 isoform a 
PLCL1                 0.114   phospholipase C-like 1 isoform b 
PLCB4                 0.113   phospholipase C beta 4 isoform a 
PLCB4                 0.113   phospholipase C beta 4 isoform b 
PLCD4                 0.112   phospholipase C, delta 4 
PLCB1                 0.103   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.103   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB3                 0.101   phospholipase C beta 3 
PLCD3                 0.098   phospholipase C delta 3 
PLCD1                 0.098   phospholipase C, delta 1 isoform 1 
PLCD1                 0.098   phospholipase C, delta 1 isoform 2 
PLCE1                 0.096   phospholipase C, epsilon 1 
PLCB2                 0.091   phospholipase C, beta 2 
PLCZ1                 0.077   phospholipase C, zeta 1 
PLCG1                 0.077   phospholipase C, gamma 1 isoform a 
PLCG1                 0.077   phospholipase C, gamma 1 isoform b 
PLCG2                 0.072   phospholipase C, gamma 2 
WIPF1                 0.012   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.012   WAS/WASL interacting protein family, member 1 
FLJ22184              0.011   PREDICTED: hypothetical protein FLJ22184 
BSN                   0.011   bassoon protein 
WNK2                  0.010   WNK lysine deficient protein kinase 2 
SF3A2                 0.010   splicing factor 3a, subunit 2 
SF1                   0.010   splicing factor 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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