FGD1 23998

Name: FGD1	Sequence: fasta or formatted (961aa)		NCBI GI: 24797153
Description: faciogenital dysplasia protein		Referenced in: Rho and Rac Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 65 2 C cysteine 2.2 21 1 D aspartate 4.5 43 2 E glutamate 9.1 87 6 F phenylalanine 2.7 26 1 G glycine 6.3 61 2 H histidine 3.3 32 2 I isoleucine 3.2 31 2 K lysine 4.8 46 2 L leucine 9.9 95 3 M methionine 1.7 16 1 N asparagine 2.7 26 2 P proline 11.6 111 4 Q glutamine 4.3 41 2 R arginine 7.2 69 3 S serine 7.9 76 2 T threonine 3.6 35 2 V valine 5.7 55 2 W tryptophan 0.7 7 1 Y tyrosine 1.9 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 faciogenital dysplasia protein FGD4 0.317 FYVE, RhoGEF and PH domain containing 4 FGD3 0.310 FYVE, RhoGEF and PH domain containing 3 FGD3 0.310 FYVE, RhoGEF and PH domain containing 3 FGD2 0.284 FYVE, RhoGEF and PH domain containing 2 FGD6 0.134 FYVE, RhoGEF and PH domain containing 6 FGD5 0.101 FYVE, RhoGEF and PH domain containing 5 FARP2 0.071 FERM, RhoGEF and pleckstrin domain protein 2 FARP1 0.060 FERM, RhoGEF, and pleckstrin domain protein 1 isoform... PREX1 0.043 phosphatidylinositol-3,4,5-trisphosphate-dependent R... ARHGEF17 0.040 Rho guanine nucleotide exchange factor (GEF) 17 [Hom... PREX2 0.039 DEP domain containing 2 isoform b PREX2 0.039 DEP domain containing 2 isoform a KALRN 0.039 kalirin, RhoGEF kinase isoform 1 KALRN 0.039 kalirin, RhoGEF kinase isoform 3 NGEF 0.037 neuronal guanine nucleotide exchange factor isoform... NGEF 0.037 neuronal guanine nucleotide exchange factor isoform... ARHGEF15 0.036 Rho guanine exchange factor 15 SPATA13 0.034 spermatogenesis associated 13 ECT2 0.034 epithelial cell transforming sequence 2 oncogene pro... ARHGEF4 0.031 Rho guanine nucleotide exchange factor 4 isoform a [... ARHGEF4 0.031 Rho guanine nucleotide exchange factor 4 isoform b [... ARHGEF16 0.031 Rho guanine exchange factor 16 KALRN 0.031 kalirin, RhoGEF kinase isoform 2 PLEKHF2 0.031 phafin 2 TRIO 0.030 triple functional domain (PTPRF interacting) ARHGEF5 0.030 rho guanine nucleotide exchange factor 5 ARHGEF10L 0.030 Rho guanine nucleotide exchange factor (GEF) 10-like... ARHGEF19 0.028 Rho guanine nucleotide exchange factor (GEF) 19 [Hom... SGEF 0.028 Src homology 3 domain-containing guanine nucleotide... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.