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Search of human proteins with 31563537
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens]
(1538 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens] 3007 0.0
gi|214010175 CLIP-associating protein 1 isoform 3 [Homo sapiens] 2782 0.0
gi|214010173 CLIP-associating protein 1 isoform 2 [Homo sapiens] 2775 0.0
gi|57863301 CLIP-associating protein 2 [Homo sapiens] 1982 0.0
gi|161016767 mucin 21 [Homo sapiens] 64 1e-09
gi|93102424 hypothetical protein LOC23116 [Homo sapiens] 62 4e-09
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 59 4e-08
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 56 2e-07
gi|57222563 colonic and hepatic tumor over-expressed protein iso... 54 9e-07
gi|57164942 colonic and hepatic tumor over-expressed protein iso... 54 9e-07
gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens] 54 2e-06
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 53 3e-06
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 52 3e-06
gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sap... 52 3e-06
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 52 6e-06
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 51 8e-06
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 50 1e-05
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 50 1e-05
gi|28559039 mediator complex subunit 1 [Homo sapiens] 49 3e-05
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 49 4e-05
gi|42518068 trans-golgi network protein 2 [Homo sapiens] 49 4e-05
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 47 1e-04
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 47 1e-04
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 47 1e-04
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 47 1e-04
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens] 46 2e-04
gi|50083281 KIAA1853 protein [Homo sapiens] 46 2e-04
gi|60097902 filaggrin [Homo sapiens] 46 3e-04
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 46 3e-04
gi|51173722 bromodomain and PHD finger-containing protein 1 isof... 46 3e-04
>gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens]
Length = 1538
Score = 3007 bits (7795), Expect = 0.0
Identities = 1538/1538 (100%), Positives = 1538/1538 (100%)
Query: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
Sbjct: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
Query: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
Sbjct: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
Query: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
Sbjct: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
Query: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
Sbjct: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
Query: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
Sbjct: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
Query: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
Sbjct: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
Query: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
Sbjct: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
Query: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
Sbjct: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
Query: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
Sbjct: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
Query: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS
Sbjct: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
Query: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR 660
DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR
Sbjct: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR 660
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI
Sbjct: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
Query: 721 PRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGLGQ 780
PRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGLGQ
Sbjct: 721 PRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGLGQ 780
Query: 781 PGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSVCSERSY 840
PGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSVCSERSY
Sbjct: 781 PGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSVCSERSY 840
Query: 841 GSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEI 900
GSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEI
Sbjct: 841 GSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEI 900
Query: 901 FTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQ 960
FTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQ
Sbjct: 901 FTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQ 960
Query: 961 KALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSET 1020
KALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSET
Sbjct: 961 KALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSET 1020
Query: 1021 RLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNH 1080
RLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNH
Sbjct: 1021 RLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNH 1080
Query: 1081 LKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSPSRLWGWSADGLAKHPP 1140
LKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSPSRLWGWSADGLAKHPP
Sbjct: 1081 LKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSPSRLWGWSADGLAKHPP 1140
Query: 1141 PFSQPNSIPTAPSHKALRRSYSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDL 1200
PFSQPNSIPTAPSHKALRRSYSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDL
Sbjct: 1141 PFSQPNSIPTAPSHKALRRSYSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDL 1200
Query: 1201 NEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGPR 1260
NEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGPR
Sbjct: 1201 NEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGPR 1260
Query: 1261 ARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEE 1320
ARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEE
Sbjct: 1261 ARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEE 1320
Query: 1321 RKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPAR 1380
RKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPAR
Sbjct: 1321 RKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPAR 1380
Query: 1381 FKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINL 1440
FKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINL
Sbjct: 1381 FKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINL 1440
Query: 1441 AAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLK 1500
AAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLK
Sbjct: 1441 AAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLK 1500
Query: 1501 PHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1538
PHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
Sbjct: 1501 PHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1538
>gi|214010175 CLIP-associating protein 1 isoform 3 [Homo sapiens]
Length = 1471
Score = 2782 bits (7212), Expect = 0.0
Identities = 1457/1546 (94%), Positives = 1458/1546 (94%), Gaps = 83/1546 (5%)
Query: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
Sbjct: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
Query: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
Sbjct: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
Query: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
Sbjct: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
Query: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
Sbjct: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
Query: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
Sbjct: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
Query: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
Sbjct: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
Query: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
Sbjct: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
Query: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
Sbjct: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
Query: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
Sbjct: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
Query: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS
Sbjct: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
Query: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR 660
DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR
Sbjct: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR 660
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI
Sbjct: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
Query: 721 PRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGLGQ 780
PRSQGCS R+TSP R LDRFGLGQ
Sbjct: 721 PRSQGCS----------------------------------RETSPNR--IGLDRFGLGQ 744
Query: 781 PGRIPGSVNAMRVLSTSTDLEAAVADAL--------KKPVRRRYEPYGMYSDDDANSDAS 832
PGRIPGSVNAMRVLSTSTDLEAAVADAL KKPVRRRYEPYGMYSDDDANSDAS
Sbjct: 745 PGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDAS 804
Query: 833 SVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRV 892
SVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRV
Sbjct: 805 SVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRV 864
Query: 893 ELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLL 952
ELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLL
Sbjct: 865 ELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLL 924
Query: 953 GSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPT 1012
GSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPT
Sbjct: 925 GSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPT 984
Query: 1013 DFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDG 1072
DFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDG
Sbjct: 985 DFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDG 1044
Query: 1073 ATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSPSRLWGWSA 1132
ATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNC
Sbjct: 1045 ATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNC--------------- 1089
Query: 1133 DGLAKHPPPFSQPNSIPTAPSHKALRRSYSPSMLDYDTENLNSEEIYSSLRGVTEAIEKF 1192
SH L SPSMLDYDTENLNSEEIYSSLRGVTEAIEKF
Sbjct: 1090 --------------------SHGGL----SPSMLDYDTENLNSEEIYSSLRGVTEAIEKF 1125
Query: 1193 SFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQP 1252
SFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQP
Sbjct: 1126 SFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQP 1185
Query: 1253 PRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELS 1312
PRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELS
Sbjct: 1186 PRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELS 1245
Query: 1313 NHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLRE 1372
NHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLRE
Sbjct: 1246 NHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLRE 1305
Query: 1373 ILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQ 1432
ILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQ
Sbjct: 1306 ILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQ 1365
Query: 1433 TADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIY 1492
TADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIY
Sbjct: 1366 TADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIY 1425
Query: 1493 SVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1538
SVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
Sbjct: 1426 SVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1471
>gi|214010173 CLIP-associating protein 1 isoform 2 [Homo sapiens]
Length = 1479
Score = 2775 bits (7193), Expect = 0.0
Identities = 1457/1554 (93%), Positives = 1458/1554 (93%), Gaps = 91/1554 (5%)
Query: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
Sbjct: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
Query: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
Sbjct: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
Query: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
Sbjct: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
Query: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
Sbjct: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
Query: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
Sbjct: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
Query: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
Sbjct: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
Query: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
Sbjct: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
Query: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
Sbjct: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
Query: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
Sbjct: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
Query: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS
Sbjct: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
Query: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASL--------GRIRTRRQSSGSATN 652
DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASL GRIRTRRQSSGSATN
Sbjct: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLDGTTTKAEGRIRTRRQSSGSATN 660
Query: 653 VASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTP 712
VASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTP
Sbjct: 661 VASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTP 720
Query: 713 SSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPP 772
SSEKRSKIPRSQGCS R+TSP R
Sbjct: 721 SSEKRSKIPRSQGCS----------------------------------RETSPNR--IG 744
Query: 773 LDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADAL--------KKPVRRRYEPYGMYSD 824
LDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADAL KKPVRRRYEPYGMYSD
Sbjct: 745 LDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSD 804
Query: 825 DDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLK 884
DDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLK
Sbjct: 805 DDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLK 864
Query: 885 SQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLL 944
SQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLL
Sbjct: 865 SQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLL 924
Query: 945 KKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIES 1004
KKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIES
Sbjct: 925 KKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIES 984
Query: 1005 LARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGA 1064
LARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGA
Sbjct: 985 LARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGA 1044
Query: 1065 LPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSP 1124
LPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNC
Sbjct: 1045 LPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNC------- 1097
Query: 1125 SRLWGWSADGLAKHPPPFSQPNSIPTAPSHKALRRSYSPSMLDYDTENLNSEEIYSSLRG 1184
SH L SPSMLDYDTENLNSEEIYSSLRG
Sbjct: 1098 ----------------------------SHGGL----SPSMLDYDTENLNSEEIYSSLRG 1125
Query: 1185 VTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNK 1244
VTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNK
Sbjct: 1126 VTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNK 1185
Query: 1245 TSLLNTQPPRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLV 1304
TSLLNTQPPRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLV
Sbjct: 1186 TSLLNTQPPRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLV 1245
Query: 1305 ADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRA 1364
ADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRA
Sbjct: 1246 ADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRA 1305
Query: 1365 LALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCI 1424
LALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCI
Sbjct: 1306 LALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCI 1365
Query: 1425 KVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKAS 1484
KVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKAS
Sbjct: 1366 KVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKAS 1425
Query: 1485 VFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1538
VFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
Sbjct: 1426 VFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1479
>gi|57863301 CLIP-associating protein 2 [Homo sapiens]
Length = 1506
Score = 1982 bits (5134), Expect = 0.0
Identities = 1057/1562 (67%), Positives = 1232/1562 (78%), Gaps = 80/1562 (5%)
Query: 1 MEPR-MESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWV 59
MEPR ME AQV QKDVG RLQVGQEL+ Y +DLE D L K VD L T WV
Sbjct: 1 MEPRSMEYFCAQVQQKDVGGRLQVGQELLLYLGAPGAISDLEEDLGRLGKTVDAL-TGWV 59
Query: 60 NSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIM 119
SSNY+V L+G++ILSA V RL RFK+ + V+ +LIDR+GDAKD VR++ QTL+LK+M
Sbjct: 60 GSSNYRVSLMGLEILSAFVDRLSTRFKSYVAMVIVALIDRMGDAKDKVRDEAQTLILKLM 119
Query: 120 DQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDP 179
DQ A P Y+W+++ GFKHKNFR+REG+CLCLI TLN GAQ L +SK++PH+C L GD
Sbjct: 120 DQVAPPMYIWEQLASGFKHKNFRSREGVCLCLIETLNIFGAQPLVISKLIPHLCILFGDS 179
Query: 180 NSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSA-ND 238
NSQVRDAAI ++VEIYRHVGE+VR DL K+G+P +RL +IF KFDEVQ SG MI S D
Sbjct: 180 NSQVRDAAILAIVEIYRHVGEKVRMDLYKRGIPPARLEMIFAKFDEVQSSGGMILSVCKD 239
Query: 239 KNFDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEG-AGAV 297
K+FDDE+SVDGNRPSSA+S P + N + R+ GS+ A+KEG AGAV
Sbjct: 240 KSFDDEESVDGNRPSSAASAFKVPAPKTSGNPA-NSARKPGSAGGPKVGGASKEGGAGAV 298
Query: 298 DEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAA 357
DE+DFIKAF DVP +QIYSSR+LEE++NKIREILSDDKHDW+QR NALKKIRSLL+AGAA
Sbjct: 299 DEDDFIKAFTDVPSIQIYSSRELEETLNKIREILSDDKHDWDQRANALKKIRSLLVAGAA 358
Query: 358 EYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNL 417
+YD FFQHLRLLDGA KLSAKDLRSQVVREACIT+ HLS+VLGNKFDHGAEAI+PT+FNL
Sbjct: 359 QYDCFFQHLRLLDGALKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEAIVPTLFNL 418
Query: 418 IPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQT 477
+PNSAK+MATSG A+R IIRHTH+PRLIP+ITSNCTSKSV VRRR FEFLDLLLQEWQT
Sbjct: 419 VPNSAKVMATSGCAAIRFIIRHTHVPRLIPLITSNCTSKSVPVRRRSFEFLDLLLQEWQT 478
Query: 478 HSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQ 537
HSLERH +VL ETIKKGIHDAD+EAR+EARK Y G +HF EAE LY++LE SYQK+LQ
Sbjct: 479 HSLERHAAVLVETIKKGIHDADAEARVEARKTYMGLRNHFPGEAETLYNSLEPSYQKSLQ 538
Query: 538 SHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTT--SRASTVSTKSVSTTGSL 595
++LK+S S+ SLPQSDRSSSSSQESLNRP S+K S +T R S S+K+ S GSL
Sbjct: 539 TYLKSSGSVASLPQSDRSSSSSQESLNRPFSSKWSTANPSTVAGRVSAGSSKASSLPGSL 598
Query: 596 QRSRSDIDVNAAASAKSK-VSSSSGTTPFSSAAALPPGSYASL--------------GRI 640
QRSRSDIDVNAAA AK+ + S + A AL GSYASL GR+
Sbjct: 599 QRSRSDIDVNAAAGAKAHHAAGQSVRSGRLGAGALNAGSYASLEDTSDKLDGTASEDGRV 658
Query: 641 RTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGS-GYGG 699
R + + + A D+RGRSR K+VSQSQ GSRS SPG++L +
Sbjct: 659 RAKLSAPLAGMGNAKA-DSRGRSRTKMVSQSQ---------PGSRSGSPGRVLTTTALST 708
Query: 700 LTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRE 759
++ G R + S++KRSKIPRSQGCSRE SP+R+ +ARSSRIPRPS+SQGCSR+ SRE
Sbjct: 709 VSSGVQRVLVNSASAQKRSKIPRSQGCSREASPSRLSVARSSRIPRPSVSQGCSREASRE 768
Query: 760 SSRDTSPARGFPPLDR-FGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEP 818
SSRDTSP R F PL +G+ Q R+ SV+AMRVL+T +D+E AVADALKKP RRRYE
Sbjct: 769 SSRDTSPVRSFQPLGPGYGISQSSRLSSSVSAMRVLNTGSDVEEAVADALKKPARRRYES 828
Query: 819 YGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLG 878
YGM+SDDDANSDASS CSERSY SRNG IP Y+RQTEDVAEVLN CASSNWSERKEGLLG
Sbjct: 829 YGMHSDDDANSDASSACSERSYSSRNGSIPTYMRQTEDVAEVLNRCASSNWSERKEGLLG 888
Query: 879 LQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFV 938
LQNLLK+QRTLSRVELKRLCEIFTRMFADPH KRVFSMFLETLVDFI +HKDDLQDWLFV
Sbjct: 889 LQNLLKNQRTLSRVELKRLCEIFTRMFADPHGKRVFSMFLETLVDFIQVHKDDLQDWLFV 948
Query: 939 LLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAI 998
LLTQLLKKMGADLLGSVQAKVQKALDVTR+SFP D QFNILMRF VDQTQTP+LKVKVAI
Sbjct: 949 LLTQLLKKMGADLLGSVQAKVQKALDVTRESFPNDLQFNILMRFTVDQTQTPSLKVKVAI 1008
Query: 999 LKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEF 1058
LKYIE+LA+QMDP DF+NSSETRLAVSR+ITWTTEPKSSDVRKAAQ VLISLFELNTPEF
Sbjct: 1009 LKYIETLAKQMDPGDFINSSETRLAVSRVITWTTEPKSSDVRKAAQSVLISLFELNTPEF 1068
Query: 1059 TMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCS 1118
TMLLGALPKTFQDGATKLLHNHL+N+ N + S + + R R ++ +SPLTSPTN S
Sbjct: 1069 TMLLGALPKTFQDGATKLLHNHLRNTGNGTQSSMGSPLTRPTPRSPANWSSPLTSPTNTS 1128
Query: 1119 HGGLSPSRLWGWSADGLAKHPPPFSQPNSIPTAPSHKALRRSYSPSMLDYDTENLNSEEI 1178
+ + SPS DYDTEN+NSE+I
Sbjct: 1129 ---------------------------------------QNTLSPSAFDYDTENMNSEDI 1149
Query: 1179 YSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKEC-DIVSRDGGAASPATEGRGGSEVEGG 1237
YSSLRGVTEAI+ FSFRSQED+NEP+KRD KK+ D + G + P GG +
Sbjct: 1150 YSSLRGVTEAIQNFSFRSQEDMNEPLKRDSKKDDGDSMCGGPGMSDPRA---GGDATDSS 1206
Query: 1238 RTALDNKTSLLNTQPPRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRD-V 1296
+TALDNK SLL++ P + PR+RDYNPY YSD+I+ ++K+ALKEA+FDDD +Q D +
Sbjct: 1207 QTALDNKASLLHSMPTHS--SPRSRDYNPYNYSDSISPFNKSALKEAMFDDDADQFPDDL 1264
Query: 1297 PIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLG 1356
+DHSDLVA+LLKELSNHNERVEERK AL EL+K+T+E+S VW+EHFKTILLLLLETLG
Sbjct: 1265 SLDHSDLVAELLKELSNHNERVEERKIALYELMKLTQEESFSVWDEHFKTILLLLLETLG 1324
Query: 1357 DKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAS 1416
DK+ +IRALAL+VLREILR+QPARFKNYAELT+MKTLEAHKD HKEVVR+AEEAAS LA+
Sbjct: 1325 DKEPTIRALALKVLREILRHQPARFKNYAELTVMKTLEAHKDPHKEVVRSAEEAASVLAT 1384
Query: 1417 SIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNT 1476
SI PEQCIKVLCPIIQTADYPINLAAIKMQTKV+ER++KE+L LL +I+PGL+QGYDN+
Sbjct: 1385 SISPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERVSKETLNLLLPEIMPGLIQGYDNS 1444
Query: 1477 ESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVST 1536
ESSVRKA VFCLVA+++VIG++LKPHL+QLTGSKMKLLNLYIKRAQT + + ++DVS
Sbjct: 1445 ESSVRKACVFCLVAVHAVIGDELKPHLSQLTGSKMKLLNLYIKRAQTGSGGADPTTDVSG 1504
Query: 1537 HS 1538
S
Sbjct: 1505 QS 1506
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 63.9 bits (154), Expect = 1e-09
Identities = 62/254 (24%), Positives = 107/254 (42%), Gaps = 20/254 (7%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
ESS + S NS+S + +++S + + S + STTS ++ +T S
Sbjct: 109 ESSTTSSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNS 168
Query: 589 VSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSG 648
S+T S S + ++ S+++ +++S ++ SS A S A+ RT +G
Sbjct: 169 ESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGA-----STATNSESRTTSNGAG 223
Query: 649 SATNVASTPDNRGRSRAKVVSQSQRSRSANPA----------GAGSRSSSPGKLLGSGYG 698
+ATN S+ + G S A S S A A GAG+ ++S + SG
Sbjct: 224 TATNSESSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGIS 283
Query: 699 GLTGGSSRGP-----PVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCS 753
+T S P T S + + + ++S G + ++ + S G S
Sbjct: 284 TVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSGAS 343
Query: 754 RDTSRESSRDTSPA 767
T+ ESS +S A
Sbjct: 344 TATNSESSTTSSGA 357
Score = 57.4 bits (137), Expect = 1e-07
Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 13/289 (4%)
Query: 529 ESSYQKALQSHLKNSDS-IVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTK 587
ESS + S NS+S S S ++S S+ + N +A S + +T+S AST +
Sbjct: 184 ESSTVSSRASTATNSESSTTSSGASTATNSESRTTSNGAGTATNSESSTTSSGASTATNS 243
Query: 588 SVST----TGSLQRSRSDIDVNAAASAKSKVSS--SSGTTPFSSAAALPPGSYASLGRIR 641
ST G+ S S + A +A + SS SSG + +++ + P S A+
Sbjct: 244 ESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNS 303
Query: 642 TRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLT 701
+S A ++ + S A + S+ S +++ A + S S G+ +
Sbjct: 304 ESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNS 363
Query: 702 GGS--SRGPPVTPSSEKRS-KIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSR 758
G S S G +SE + S + E+S G + ++ ++S G S T+
Sbjct: 364 GSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNS 423
Query: 759 ESSRDTSPARGFPPLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADA 807
ESS +S A G G+ + +TS AV++A
Sbjct: 424 ESSTTSSGAN---TATNSGSSVTSAGSGTAALTGMHTTSHSASTAVSEA 469
Score = 55.5 bits (132), Expect = 4e-07
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 4/229 (1%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
N SIV+ + +SS + N S S T+ S+ ++ ST + + S
Sbjct: 70 NGVSIVTNSEFHTTSSGISTATNSEFSTVSSGISIATNSESSTTSSGASTATNSESSTPS 129
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRG 661
+ A ++ S +SS +T +S ++ ++ + SSG++T ++ +
Sbjct: 130 SGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTTSSGAST-ATNSESSTV 188
Query: 662 RSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIP 721
SRA + S+ S +++ A + S S G+G + S+ + ++ S P
Sbjct: 189 SSRASTATNSESSTTSSGASTATNSESRTTSNGAGTATNSESSTTSSGASTATNSESSTP 248
Query: 722 RS---QGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPA 767
S + E+S G ++ ++S G S T+ ESS +S A
Sbjct: 249 SSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGA 297
Score = 52.4 bits (124), Expect = 3e-06
Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 11/249 (4%)
Query: 527 TLESSYQKALQSHLKNSDSIVSLPQSDRSS--SSSQESLNRPLSAKRSPTGSTTSRASTV 584
T S A S + S S + SS SS + S+ S ST + + +
Sbjct: 142 TTSSGASTATNSDSSTTSSEASTATNSESSTTSSGASTATNSESSTVSSRASTATNSESS 201
Query: 585 STKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRR 644
+T S ++T + SR+ + A+ ++SSG + +++ + P S A T
Sbjct: 202 TTSSGASTATNSESRTTSNGAGTATNSESSTTSSGASTATNSESSTPSSGAGTA---TNS 258
Query: 645 QSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANP-AGAGSRSSSPGKLLGSGYGGLTGG 703
+SS +++ + ++ + + +S S S+ P +GA + ++S SG T
Sbjct: 259 ESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNS 318
Query: 704 -----SSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSR 758
SS T S + S + E+S G + ++ + S G S T+
Sbjct: 319 DSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTSTATNS 378
Query: 759 ESSRDTSPA 767
ESS +S A
Sbjct: 379 ESSTVSSGA 387
>gi|93102424 hypothetical protein LOC23116 [Homo sapiens]
Length = 1720
Score = 62.0 bits (149), Expect = 4e-09
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 14 QKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVD--GLATSWVNSSNYKVVLLGM 71
Q+D R Q +EL KQ T LV L + ++ SN+KVV +
Sbjct: 362 QEDYKNRTQAVEEL------KQVLGKFNPSSTPHSSLVGFISLLYNLLDDSNFKVVHGTL 415
Query: 72 DILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQAANPQYVWDR 131
++L LV RL ++ + +G V+ + + L D K ++++ + LK+M + PQ V
Sbjct: 416 EVLHLLVIRLGEQVQQFLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKE-VGPQQVLCL 474
Query: 132 MLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPNSQVRDAAINSL 191
+L KHK+ R RE + I +L ++ L K+ + L D +VR AA+ +
Sbjct: 475 LLEHLKHKHSRVREEVVNICICSLLTYPSEDFDLPKLSFDLAPALVDSKRRVRQAALEAF 534
Query: 192 VEIYRHVGERVRADLSKKGLPQSRLNVIFTKFD--EVQKSGNMIQSA 236
+ +G + +++F D E+Q +G+ + +A
Sbjct: 535 AVLASSMG-------------SGKTSILFKAVDTVELQDNGDGVMNA 568
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 58.9 bits (141), Expect = 4e-08
Identities = 72/261 (27%), Positives = 104/261 (39%), Gaps = 38/261 (14%)
Query: 538 SHLKNSDSIVSLPQSD---RSSSSSQESLNRPLSAKRSPT----GSTTSRASTVSTKSVS 590
SH + S S S +S + S + +R + RSP G + SR T S S
Sbjct: 449 SHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRS 508
Query: 591 TTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSA 650
+ +RSRS A +S+ G S + P S + + R R +S+
Sbjct: 509 RSPQWRRSRS-----AQRWGRSRSPQRRGR---SRSPQRPGWSRSRNTQRRGRSRSARRG 560
Query: 651 TNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRG--- 707
+ + +P RGRSR++ ++ RSRS PA SRS +P + G SR
Sbjct: 561 RSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTP 620
Query: 708 ------------------PPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMS 749
P S RS+ P +G SR +P R G +R SR P
Sbjct: 621 ARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSR-SRTPARRSG 679
Query: 750 QGCSRDTSRES-SRDTSPARG 769
+ SR +R SR +P RG
Sbjct: 680 RSRSRTPARRGRSRSRTPRRG 700
Score = 56.6 bits (135), Expect = 2e-07
Identities = 74/248 (29%), Positives = 105/248 (42%), Gaps = 36/248 (14%)
Query: 537 QSHLKNSDSIVSLPQSDRSSS---SSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTG 593
+S +S +LPQ+ R S SS E N+ L+ +R +GS +S V K+V+ T
Sbjct: 1477 RSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESS----VDQKTVARTP 1532
Query: 594 SLQRSRS----DIDVNAAASAKSKVSSSSGTTPFSSAAALPP-------GS---YASLGR 639
QRSRS ++DV +AS + + S S ++P S A P GS S R
Sbjct: 1533 LGQRSRSGSSQELDVKPSASPQER--SESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSR 1590
Query: 640 IRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSAN-----PAGAGSRSSSPGKLLG 694
+ RR SGS+ V P R RA+ S S A P + S SSS G+
Sbjct: 1591 LSPRRSRSGSSPEVKDKP--RAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPS 1648
Query: 695 SGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIG------LARSSRIPRPSM 748
T S PP + ++ + S+ T P R L R +R+ R S
Sbjct: 1649 PEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSR 1708
Query: 749 SQGCSRDT 756
S S +T
Sbjct: 1709 SASSSPET 1716
Score = 53.5 bits (127), Expect = 2e-06
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 9/212 (4%)
Query: 562 SLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTT 621
S R S RSP SR+ T + + S + + R RS ++S+ + G +
Sbjct: 556 SARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRS 615
Query: 622 PFSSAAALPPGSYASLGR-IRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPA 680
+ A + + + R R+R + S + + TP RGRSR++ ++ RSRS PA
Sbjct: 616 RSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPA 675
Query: 681 --GAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETS----PNR 734
SRS +P + S G SR + S+ P+ +G S +S +R
Sbjct: 676 RRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSR 735
Query: 735 IGLARSSRIPRPSMSQGCSRDTSRESSRDTSP 766
RS P M + SR +SR S +SP
Sbjct: 736 TSQRRSRSNSSPEMKK--SRISSRRSRSLSSP 765
Score = 53.1 bits (126), Expect = 2e-06
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 30/234 (12%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVS------TKSVSTTGSLQRSRSDID 603
P RSS SS E + ++RS + S++ + + + SVS+ ++SRS
Sbjct: 1685 PPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRR 1744
Query: 604 VNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIR------TRRQSSGSATNVASTP 657
+A+S ++K +S G +P + P G S R R TRR+ ++ S
Sbjct: 1745 RRSASSPRTKTTSRRGRSP----SPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRR 1800
Query: 658 DNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGG-LTGGSSRGPPVTPSSEK 716
R RSR++V + + G+G S SP + S G SR P P+S K
Sbjct: 1801 RQRSRSRSRVTRRRR-------GGSGYHSRSPARQESSRTSSRRRRGRSRTP---PTSRK 1850
Query: 717 RSKIPRSQGCSRETSPNRIGLA--RSSRIPRPSMSQGCSRDTSRESSRDTSPAR 768
RS+ R+ + S +R A R SR P +S+ SR + SR S +R
Sbjct: 1851 RSR-SRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSR 1903
Score = 50.1 bits (118), Expect = 2e-05
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 29/224 (12%)
Query: 554 RSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSK 613
RSSSSS S + S++S +S+ S+ S S + S S + V + K +
Sbjct: 2531 RSSSSSSSS-----------SSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALK-R 2578
Query: 614 VSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQR 673
V S + + PP + R RR SS S+++ +S+ + S + S S
Sbjct: 2579 VPSPTPAPKEAVREGRPPEPTPAK---RKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2635
Query: 674 SRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPR----SQGCSRE 729
S S++ + + S S SP K G L +S P P E+RS+ PR S SR
Sbjct: 2636 SSSSSSSSSSSSSPSPAK---PGPQALPKPAS--PKKPPPGERRSRSPRKPIDSLRDSRS 2690
Query: 730 TSPNRIGLARSSRIPRP-----SMSQGCSRDTSRESSRDTSPAR 768
S + + R S P P S S+ SR R SR S R
Sbjct: 2691 LSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKR 2734
Score = 48.9 bits (115), Expect = 4e-05
Identities = 60/231 (25%), Positives = 91/231 (39%), Gaps = 27/231 (11%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVS--TTGSLQRSRSDIDVNAA 607
P +RSS+ + PL A+R + +S + V+ + S R RS
Sbjct: 352 PSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSP----PK 407
Query: 608 ASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKV 667
+ K SSSS ++P S +S + GS ++S+P ++ RS +
Sbjct: 408 SPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGR- 466
Query: 668 VSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPR----- 722
++ +S S P+ RS SP G SR T RS+ P+
Sbjct: 467 -AKRDKSHSHTPSRRMGRSRSPAT--------AKRGRSRSRTPTKRGHSRSRSPQWRRSR 517
Query: 723 -SQGCSRETSPNRIGLARSSRIP-----RPSMSQGCSRDTSRESSRDTSPA 767
+Q R SP R G +RS + P R + +G SR R S SPA
Sbjct: 518 SAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPA 568
Score = 48.5 bits (114), Expect = 5e-05
Identities = 65/246 (26%), Positives = 92/246 (37%), Gaps = 59/246 (23%)
Query: 554 RSSSSSQESLNRPLSAKRSPTGSTT----SRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
RS SSS+ S +RS + S+ SR S+ ++S+S+ S +SR + + + S
Sbjct: 723 RSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSR--LSLRRSLS 780
Query: 610 AKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVAS--TPDNRGRSRAKV 667
S TP RR SGS+ A TP R RS +
Sbjct: 781 GSSPCPKQKSQTP-------------------PRRSRSGSSQPKAKSRTPPRRSRSSS-- 819
Query: 668 VSQSQRSRSANPAGAGSRSSSPGKLLGSG----YGGLTGGSSRGPPVT----------PS 713
S + +S P+ SSSP + SG G +T + VT P
Sbjct: 820 -SPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPD 878
Query: 714 SEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCS-----------RDTSRESSR 762
E +S+ P CS + P +SS PR S S+ S R S S
Sbjct: 879 PELKSRTPSRHSCSGSSPPR----VKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSS 934
Query: 763 DTSPAR 768
SP+R
Sbjct: 935 SPSPSR 940
Score = 47.4 bits (111), Expect = 1e-04
Identities = 66/249 (26%), Positives = 104/249 (41%), Gaps = 19/249 (7%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
+SS +K H S+S +S + S ++S ++ RS T + SR + ST +
Sbjct: 211 KSSKKK---KHRSESESKKRKHRSP-TPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSA 266
Query: 589 VSTTGS-LQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS--YASLGRIRTRRQ 645
S + S RSRS +A+AK+ ++ +G +P ++ G ++ G T+R
Sbjct: 267 DSASSSDTSRSRS-----RSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRP 321
Query: 646 SS-GSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGS 704
SS +AT S+P K S ++ S S + G +P LL +GG
Sbjct: 322 SSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPL 381
Query: 705 SRGP----PVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRES 760
+ P PV P SE RS S E P + S P P ++ +S
Sbjct: 382 ATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQ--SSSSESSPPSPQPTKVSRHASSSPE 439
Query: 761 SRDTSPARG 769
S +PA G
Sbjct: 440 SPKPAPAPG 448
Score = 45.8 bits (107), Expect = 3e-04
Identities = 62/227 (27%), Positives = 87/227 (38%), Gaps = 16/227 (7%)
Query: 553 DRSSSSSQESLNRPLSAKRSPT------GSTTSRASTVSTKSVSTTGSLQRSRSDIDVNA 606
DRS SS S R S RS GS S +S T+ +R RS +
Sbjct: 1789 DRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTS 1848
Query: 607 AASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAK 666
++S+ S + S A+ S + +RR+S + V+ R RSR
Sbjct: 1849 RKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSR---RRSRSRTS 1905
Query: 667 VVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGL----TGGSSRGPPVTPSSEKRSKIPR 722
V + RSR++ + SRS +P SR PPVT + P
Sbjct: 1906 VTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPV 1965
Query: 723 SQGCSR-ETSP--NRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSP 766
++ SR TSP R +R+S + R S T R S TSP
Sbjct: 1966 TRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSP 2012
Score = 42.7 bits (99), Expect = 0.003
Identities = 61/240 (25%), Positives = 89/240 (37%), Gaps = 45/240 (18%)
Query: 530 SSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAK------------------- 570
SS + S +S S S S SSSS E + P+ +
Sbjct: 2533 SSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVRE 2592
Query: 571 -RSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAAL 629
R P + R S+ S S++ S S S ++++S+ S SSSS ++ SS +
Sbjct: 2593 GRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPA 2652
Query: 630 PPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSP 689
PG A ++ G + R RS K + + SRS + + R SP
Sbjct: 2653 KPGPQALPKPASPKKPPPG---------ERRSRSPRKPIDSLRDSRSLSYSPVERRRPSP 2703
Query: 690 -----GKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIP 744
+ S G G RG +PS ++R RET R RSSR P
Sbjct: 2704 QPSPRDQQSSSSERGSRRG-QRGDSRSPSHKRR----------RETPSPRPMRHRSSRSP 2752
Score = 41.2 bits (95), Expect = 0.008
Identities = 58/209 (27%), Positives = 77/209 (36%), Gaps = 29/209 (13%)
Query: 550 PQSDRSSSSSQESLNRPLSAKR-SPTGSTTSRAST---VSTKSVSTTGSLQRSRSDIDVN 605
P + R S S + R S R SP SR+ T +S S T + R RS
Sbjct: 1964 PVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTP 2023
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRA 665
A +S+ S + P + + P + R RT R + G + S P R RS +
Sbjct: 2024 PAIRRRSR--SRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSAS 2081
Query: 666 KVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQ- 724
S S RSRSA P + S SR PPV +S + S R
Sbjct: 2082 G--SSSDRSRSATPPATRNHS-----------------GSRTPPVALNSSRMSCFSRPSM 2122
Query: 725 ---GCSRETSPNRIGLARSSRIPRPSMSQ 750
R SP + SSR P + Q
Sbjct: 2123 SPTPLDRCRSPGMLEPLGSSRTPMSVLQQ 2151
Score = 38.9 bits (89), Expect = 0.039
Identities = 74/320 (23%), Positives = 113/320 (35%), Gaps = 48/320 (15%)
Query: 533 QKALQSHLKNSDSIVSLPQSDRSSSSS--QESLNRPLSAKRSPTGS---TTSRASTVSTK 587
+ A S + D P DR SS +++L P +RS GS T + S + T
Sbjct: 1174 EDATASPPRQKDKFSPFPVQDRPESSLVFKDTLRTP-PRERSGAGSSPETKEQNSALPTS 1232
Query: 588 SVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSS 647
S +S+ S S T+ F S+ + SL +++ Q+S
Sbjct: 1233 SQDEELMEVVEKSEEPAGQILSHLSSELKEMSTSNFESSPEVEERPAVSLTLDQSQSQAS 1292
Query: 648 GSATNVASTPDNRG----RSRAKVVSQSQRSRSANPAGAGSRSSSP-GKLLGSGYGGLTG 702
A V S + G K +S S ++ + R+S P G + +G+
Sbjct: 1293 LEAVEVPSMASSWGGPHFSPEHKELSNSPLRENSFGSPLEFRNSGPLGTEMNTGFSSEVK 1352
Query: 703 GSSRGP-----PVTPSSEKRSKIPRSQG-CSRETSPNRIGLA------------------ 738
GP PS + + + RS G S E SP+ + A
Sbjct: 1353 EDLNGPFLNQLETDPSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPR 1412
Query: 739 -----RSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGLGQPGR--IPGSVNAM 791
RSS P M G R SR S +SP R G G P R + GS M
Sbjct: 1413 TPSRERSSSASSPEMKDGLPRTPSRRSRSGSSPGL------RDGSGTPSRHSLSGSSPGM 1466
Query: 792 RVLSTSTDLEAAVADALKKP 811
+ + + + D+ +P
Sbjct: 1467 KDIPRTPSRGRSECDSSPEP 1486
Score = 38.5 bits (88), Expect = 0.051
Identities = 64/271 (23%), Positives = 90/271 (33%), Gaps = 26/271 (9%)
Query: 550 PQSDRSSSSSQESLNRPLSA--KRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAA 607
P++ S SS E A +RS +GS++ S ST S +
Sbjct: 1612 PRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRG 1671
Query: 608 ASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKV 667
+ + + + S T P RR+SS S+ + RSR+
Sbjct: 1672 SRSSPEPKTKSRTPP--------------------RRRSSRSSPELTRKARLSRRSRSAS 1711
Query: 668 VSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCS 727
S RSR+ SSP S +S T S RS P+ +G
Sbjct: 1712 SSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQ 1771
Query: 728 RETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGLGQPGRIPGS 787
R S +R +R R G S+ TSR R S +R R G G R P
Sbjct: 1772 RSRSRSR---REKTRTTRRRDRSGSSQSTSRRRQRSRSRSR-VTRRRRGGSGYHSRSPAR 1827
Query: 788 VNAMRVLSTSTDLEAAVADALKKPVRRRYEP 818
+ R S + +K R R P
Sbjct: 1828 QESSRTSSRRRRGRSRTPPTSRKRSRSRTSP 1858
Score = 35.4 bits (80), Expect = 0.43
Identities = 40/150 (26%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAA 608
LP+ S SSS ++ +P + R + S V ++ SL S+S
Sbjct: 964 LPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGP-SLSGSKSPCPQEK-- 1020
Query: 609 SAKSKVSSSSGTTPFSSA--AALPPG-SYASLGRIRTRRQSSGSATNVASTPDNRGRSRA 665
S S V S G+ + ++ PPG SY + ++ + QS S + + T R
Sbjct: 1021 SKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQSH 1080
Query: 666 KVVSQSQRSRSANPAGAGSRSSSPGKLLGS 695
Q +P G SRSSSP L S
Sbjct: 1081 SESPSLQSKSQTSPKGGRSRSSSPVTELAS 1110
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 56.2 bits (134), Expect = 2e-07
Identities = 91/358 (25%), Positives = 137/358 (38%), Gaps = 48/358 (13%)
Query: 526 HTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGST----TSRA 581
H+ SS+ +L SH +S S L R S S SP+G + R
Sbjct: 255 HSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRN 314
Query: 582 STVSTKSVSTTGSLQRSRSDIDVNAAAS--AKSKVSSSSGTTPFSSAAALPPGSYAS--- 636
+S + G + S D ++ S + K ++++ T P + P S S
Sbjct: 315 GGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQG 374
Query: 637 --------LGRIRTRRQSSGSATNVASTPDNRGRSRAKVV-----SQS-QRSRSANPAGA 682
GR R RR+ + + AS P RGR R + S+S R+RS++ +G+
Sbjct: 375 RGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGS 434
Query: 683 GSRSSSPGKLLGS--GYGGLTGGSSRGPP--------VTPSSEKRSKIPRSQGCSRETSP 732
G + PG GS G+GG + PP +P + R P + SR P
Sbjct: 435 GRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGP 494
Query: 733 NRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPL--DRFGLGQPGRIPGSVNA 790
+ + SSR P S S+ + SR SP + PL D+ G G+
Sbjct: 495 HPRSWS-SSRSPSKSRSRSAEK-RPHSPSRSPSPKK---PLSRDKDGEGRARHSEAEATR 549
Query: 791 MRVLSTS--------TDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSVCSERSY 840
R S S D + + R+R PY S ++S SS S RS+
Sbjct: 550 ARRRSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSSSSCLSSDYSTRSH 607
Score = 43.1 bits (100), Expect = 0.002
Identities = 57/207 (27%), Positives = 75/207 (36%), Gaps = 70/207 (33%)
Query: 641 RTRRQSSGSATNVASTP---DNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGY 697
R+ R SSGS+ + + + D+R SR + + ++ + +GSRS SP GSG+
Sbjct: 251 RSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSG--GSGW 308
Query: 698 G---------------GLTGGSSRGPPVTPSSE-------------------KRSKIPRS 723
G G GS+ PP PSS K S PRS
Sbjct: 309 GSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRS 368
Query: 724 QGCSRETSPNRIGLA----------------------RSSRIPRPSMSQGCSRDTSR-ES 760
S+ G A R R PRP+ +G SR SR S
Sbjct: 369 APSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARS 428
Query: 761 SRDTSPARGFPPLDRFGLGQPGRIPGS 787
S D+ RG P PG PGS
Sbjct: 429 SSDSGSGRGAP--------GPGPEPGS 447
>gi|57222563 colonic and hepatic tumor over-expressed protein
isoform b [Homo sapiens]
Length = 1972
Score = 54.3 bits (129), Expect = 9e-07
Identities = 99/541 (18%), Positives = 197/541 (36%), Gaps = 58/541 (10%)
Query: 53 GLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQ 112
GL +V SN V L G++ V K G V+ ++ ++ + + ++
Sbjct: 51 GLIKKFVTDSNAVVQLKGLEAALVYVENAHVAGKTT-GEVVSGVVSKVFNQPKAKAKELG 109
Query: 113 TLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHI 172
+ + + + V + +L G +KN + L L+ G++ + L I+ +
Sbjct: 110 IEICLMYIEIEKGEAVQEELLKGLDNKNPKIIVACIETLRKALSEFGSKIILLKPIIKVL 169
Query: 173 CNLLGDPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNM 232
L VRD A VEIYR + + +R L
Sbjct: 170 PKLFESREKAVRDEAKLIAVEIYRWIRDALRPPLQN------------------------ 205
Query: 233 IQSANDKNFDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKE 292
I S K ++E K P S+ R +++ + L + SA +
Sbjct: 206 INSVQLKELEEE--------------WVKLPTSAPRPTRFLRSQQELEAKLEQQQSAGGD 251
Query: 293 GAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSD--DKHDWEQRVNALKKIRS 350
G D+ D +VP + Y + E ++K+ + D + W++R AL+ +
Sbjct: 252 AEGGGDDGD------EVPQIDAYELLEAVEILSKLPKDFYDKIEAKKWQERKEALESVEV 305
Query: 351 LLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAI 410
L+ E ++ ++ L K+ KD +V A L L+ L KF A +
Sbjct: 306 LIKNPKLEAGDYADLVKALK---KVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHV 362
Query: 411 MPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDL 470
+PTI + + A+ I T + + + + +K+ ++++ F+
Sbjct: 363 VPTILEKFKEKKPQVVQALQEAIDAIFLTTTLQNISEDVLAVMDNKNPTIKQQTSLFIAR 422
Query: 471 LLQEWQTHSLERH-ISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLE 529
+ +L + + + K I+D+ E R A + + E +
Sbjct: 423 SFRHCTASTLPKSLLKPFCAALLKHINDSAPEVRDAA---FEALGTALKVVGEKAVNPFL 479
Query: 530 SSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSV 589
+ K +K V L ++ ++ + +PL + + +G+ A TK +
Sbjct: 480 ADVDKLKLDKIKECSEKVELIHGKKAGLAADKKEFKPLPGRTAASGA----AGDKDTKDI 535
Query: 590 S 590
S
Sbjct: 536 S 536
Score = 50.4 bits (119), Expect = 1e-05
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 28/208 (13%)
Query: 20 RLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATS-------------WVN----SS 62
+ Q+ + + D+ +D +H L +VD L + W+ +
Sbjct: 1197 KTQMSSCVAKWLQDEMFHSDFQHHNKALAVMVDHLESEKEGVIGCLDLILKWLTLRFFDT 1256
Query: 63 NYKVVLLGMDILSALVTRLQDR----FKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKI 118
N V++ ++ L L T L + + + + +P L+ ++G+ KD +R+ D +L
Sbjct: 1257 NTSVLMKALEYLKLLFTLLSEEEYHLTENEASSFIPYLVVKVGEPKDVIRK-DVRAILNR 1315
Query: 119 MDQAANPQYVWDRMLGGFKHKNFRTREGICL----CLIATLNASGAQTLTLSKIVPHICN 174
M ++ ++ G K KN + R CL CL+ + + Q T K + I
Sbjct: 1316 MCLVYPASKMFPFIMEGTKSKNSKQRAE-CLEELGCLVESYGMNVCQP-TPGKALKEIAV 1373
Query: 175 LLGDPNSQVRDAAINSLVEIYRHVGERV 202
+GD ++ VR+AA+N++V +Y G++V
Sbjct: 1374 HIGDRDNAVRNAALNTIVTVYNVHGDQV 1401
Score = 43.1 bits (100), Expect = 0.002
Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 6/246 (2%)
Query: 62 SNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQ 121
+N++V+ + + I+ AL+ + + K VL L+D++GD K ++ + I +
Sbjct: 653 TNFQVMQMKLHIV-ALIAQKGNFSKTSAQVVLDGLVDKIGDVKCGNNAKEA--MTAIAEA 709
Query: 122 AANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPNS 181
P + F KN + + L + G L + + ++ L N
Sbjct: 710 CMLPWTAEQVVSMAFSQKNPKNQSETLNWLSNAIKEFGFSGLNVKAFISNVKTALAATNP 769
Query: 182 QVRDAAINSLVEIYRHVGERVRADL-SKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
VR AAI L +Y +VG +R +K S+++ F K +
Sbjct: 770 AVRTAAITLLGVMYLYVGPSLRMFFEDEKPALLSQIDAEFEKMQGQSPPAPTRGISKHST 829
Query: 241 FDDEDSVDGNRPSSASSTSSKAPPSSR--RNVGMGTTRRLGSSTLGSKSSAAKEGAGAVD 298
++ DG+ P S+ P + + ++G + E AG ++
Sbjct: 830 SGTDEGEDGDEPDDGSNDVVDLLPRTEISDKITSELVSKIGDKNWKIRKEGLDEVAGIIN 889
Query: 299 EEDFIK 304
+ FI+
Sbjct: 890 DAKFIQ 895
Score = 42.7 bits (99), Expect = 0.003
Identities = 63/284 (22%), Positives = 111/284 (39%), Gaps = 34/284 (11%)
Query: 50 LVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVRE 109
LV L +N +V L L+ L L+ +F G V+P+++++ + K V +
Sbjct: 320 LVKALKKVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHVVPTILEKFKEKKPQVVQ 379
Query: 110 QDQTLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIV 169
Q + I Q + + +L +KN ++ L + + A TL S +
Sbjct: 380 ALQEAIDAIF-LTTTLQNISEDVLAVMDNKNPTIKQQTSLFIARSFRHCTASTLPKSLLK 438
Query: 170 PHICNLL---GDPNSQVRDAAINSLVEIYRHVGERV----RADLSKKGLPQSRLNVIFTK 222
P LL D +VRDAA +L + VGE+ AD+ K L + + +
Sbjct: 439 PFCAALLKHINDSAPEVRDAAFEALGTALKVVGEKAVNPFLADVDKLKLDKIKECSEKVE 498
Query: 223 FDEVQKSGNMIQSANDKNF-------------DDEDSVDGNRP-----SSASSTSSKAPP 264
+K+G +A+ K F D+D+ D + P A + + PP
Sbjct: 499 LIHGKKAG---LAADKKEFKPLPGRTAASGAAGDKDTKDISAPKPGPLKKAPAAKAGGPP 555
Query: 265 SSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEEDFIKAFDD 308
+ G G+ G+K+ E V+ E I+ ++
Sbjct: 556 KKGKPAAPG-----GAGNTGTKNKKGLETKEIVEPELSIEVCEE 594
Score = 42.0 bits (97), Expect = 0.005
Identities = 105/566 (18%), Positives = 196/566 (34%), Gaps = 39/566 (6%)
Query: 59 VNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKI 118
+N SN +V ++IL L + K + + +I LGD+K++VR +
Sbjct: 909 LNDSNKILVQQTLNILQQLAVAMGPNIKQHVKNLGIPIITVLGDSKNNVRAAALATVNAW 968
Query: 119 MDQAANPQYVWDRMLGG-FKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLG 177
+Q +++ L K +N R+ + L L + L VPH+ + L
Sbjct: 969 AEQTGMKEWLEGEDLSEELKKENPFLRQELLGWLAEKLPTLRSTPTDLILCVPHLYSCLE 1028
Query: 178 DPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIF----------------T 221
D N VR A ++L H+G A + K P S+ V+ T
Sbjct: 1029 DRNGDVRKKAQDALPFFMMHLGYEKMAKATGKLKPTSKDQVLAMLEKAKVNMPAKPAPPT 1088
Query: 222 KFDEVQKSGNMIQSANDKNFDDEDSVDGNRPSSASSTSSKAPP-SSRRNVGMGTTRRLGS 280
K G+ + ED + + +KAP SS+ G +++ S
Sbjct: 1089 KATSKPMGGSAPAKFQPASAPAEDCISSSTEPKPDPKKAKAPGLSSKAKSAQG--KKMPS 1146
Query: 281 STLGSKSSAAKEGAGAV----DEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKH 336
T K K G + +E +K + V++ + +E I +++ +S
Sbjct: 1147 KT-SLKEDEDKSGPIFIVVPNGKEQRMKDEKGLKVLKWNFTTPRDEYIEQLKTQMSSCVA 1205
Query: 337 DWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAK-------DLRSQVVREAC 389
W Q + A A D+ + G L K D + V+ +A
Sbjct: 1206 KWLQDEMFHSDFQHHNKALAVMVDHLESEKEGVIGCLDLILKWLTLRFFDTNTSVLMKAL 1265
Query: 390 ITLGHLSSVLGNKFDH----GAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRL 445
L L ++L + H A + +P + + ++ + + ++
Sbjct: 1266 EYLKLLFTLLSEEEYHLTENEASSFIPYLVVKVGEPKDVIRKDVRAILNRMCLVYPASKM 1325
Query: 446 IPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIE 505
P I SK+ R C E L L++ + + + + I I D D+ R
Sbjct: 1326 FPFIMEGTKSKNSKQRAECLEELGCLVESYGMNVCQPTPGKALKEIAVHIGDRDNAVRNA 1385
Query: 506 ARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNS---DSIVSLPQSDRSSSSSQES 562
A ++ + L L L+ +K S S + Q + +Q
Sbjct: 1386 ALNTIVTVYNVHGDQVFKLIGNLSEKDMSMLEERIKRSAKRPSAAPIKQVEEKPQRAQNI 1445
Query: 563 LNRPLSAKRSPTGSTTSRASTVSTKS 588
+ ++ P +S+ + + S
Sbjct: 1446 SSNANMLRKGPAEDMSSKLNQARSMS 1471
Score = 33.5 bits (75), Expect = 1.6
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 21/246 (8%)
Query: 1271 DAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLK 1330
D + D L EAV E L +P D D + ++ +ERK AL +
Sbjct: 260 DEVPQIDAYELLEAV-----EILSKLPKDFYDKI---------EAKKWQERKEALESVEV 305
Query: 1331 ITREDSLGVWEEHFKTILLLLLETLG-DKDHSIRALALRVLREILRNQPARFKNYAELTI 1389
+ + L + + ++ L + +G D + + ALA + L + +F YA +
Sbjct: 306 LIKNPKLEAGD--YADLVKALKKVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHVV 363
Query: 1390 MKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKV 1449
LE K+ +VV+A +EA + + + + + ++ + I +
Sbjct: 364 PTILEKFKEKKPQVVQALQEAIDAIFLTTTLQNISEDVLAVMDNKNPTIKQQTSLFIARS 423
Query: 1450 VERIAKESL-LQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGED-LKPHLAQLT 1507
+L LL LL+ +++ VR A+ L V+GE + P LA +
Sbjct: 424 FRHCTASTLPKSLLKPFCAALLKHINDSAPEVRDAAFEALGTALKVVGEKAVNPFLADV- 482
Query: 1508 GSKMKL 1513
K+KL
Sbjct: 483 -DKLKL 487
>gi|57164942 colonic and hepatic tumor over-expressed protein
isoform a [Homo sapiens]
Length = 2032
Score = 54.3 bits (129), Expect = 9e-07
Identities = 99/541 (18%), Positives = 197/541 (36%), Gaps = 58/541 (10%)
Query: 53 GLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQ 112
GL +V SN V L G++ V K G V+ ++ ++ + + ++
Sbjct: 51 GLIKKFVTDSNAVVQLKGLEAALVYVENAHVAGKTT-GEVVSGVVSKVFNQPKAKAKELG 109
Query: 113 TLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHI 172
+ + + + V + +L G +KN + L L+ G++ + L I+ +
Sbjct: 110 IEICLMYIEIEKGEAVQEELLKGLDNKNPKIIVACIETLRKALSEFGSKIILLKPIIKVL 169
Query: 173 CNLLGDPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNM 232
L VRD A VEIYR + + +R L
Sbjct: 170 PKLFESREKAVRDEAKLIAVEIYRWIRDALRPPLQN------------------------ 205
Query: 233 IQSANDKNFDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKE 292
I S K ++E K P S+ R +++ + L + SA +
Sbjct: 206 INSVQLKELEEE--------------WVKLPTSAPRPTRFLRSQQELEAKLEQQQSAGGD 251
Query: 293 GAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSD--DKHDWEQRVNALKKIRS 350
G D+ D +VP + Y + E ++K+ + D + W++R AL+ +
Sbjct: 252 AEGGGDDGD------EVPQIDAYELLEAVEILSKLPKDFYDKIEAKKWQERKEALESVEV 305
Query: 351 LLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAI 410
L+ E ++ ++ L K+ KD +V A L L+ L KF A +
Sbjct: 306 LIKNPKLEAGDYADLVKALK---KVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHV 362
Query: 411 MPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDL 470
+PTI + + A+ I T + + + + +K+ ++++ F+
Sbjct: 363 VPTILEKFKEKKPQVVQALQEAIDAIFLTTTLQNISEDVLAVMDNKNPTIKQQTSLFIAR 422
Query: 471 LLQEWQTHSLERH-ISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLE 529
+ +L + + + K I+D+ E R A + + E +
Sbjct: 423 SFRHCTASTLPKSLLKPFCAALLKHINDSAPEVRDAA---FEALGTALKVVGEKAVNPFL 479
Query: 530 SSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSV 589
+ K +K V L ++ ++ + +PL + + +G+ A TK +
Sbjct: 480 ADVDKLKLDKIKECSEKVELIHGKKAGLAADKKEFKPLPGRTAASGA----AGDKDTKDI 535
Query: 590 S 590
S
Sbjct: 536 S 536
Score = 50.4 bits (119), Expect = 1e-05
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 28/208 (13%)
Query: 20 RLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATS-------------WVN----SS 62
+ Q+ + + D+ +D +H L +VD L + W+ +
Sbjct: 1197 KTQMSSCVAKWLQDEMFHSDFQHHNKALAVMVDHLESEKEGVIGCLDLILKWLTLRFFDT 1256
Query: 63 NYKVVLLGMDILSALVTRLQDR----FKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKI 118
N V++ ++ L L T L + + + + +P L+ ++G+ KD +R+ D +L
Sbjct: 1257 NTSVLMKALEYLKLLFTLLSEEEYHLTENEASSFIPYLVVKVGEPKDVIRK-DVRAILNR 1315
Query: 119 MDQAANPQYVWDRMLGGFKHKNFRTREGICL----CLIATLNASGAQTLTLSKIVPHICN 174
M ++ ++ G K KN + R CL CL+ + + Q T K + I
Sbjct: 1316 MCLVYPASKMFPFIMEGTKSKNSKQRAE-CLEELGCLVESYGMNVCQP-TPGKALKEIAV 1373
Query: 175 LLGDPNSQVRDAAINSLVEIYRHVGERV 202
+GD ++ VR+AA+N++V +Y G++V
Sbjct: 1374 HIGDRDNAVRNAALNTIVTVYNVHGDQV 1401
Score = 43.1 bits (100), Expect = 0.002
Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 6/246 (2%)
Query: 62 SNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQ 121
+N++V+ + + I+ AL+ + + K VL L+D++GD K ++ + I +
Sbjct: 653 TNFQVMQMKLHIV-ALIAQKGNFSKTSAQVVLDGLVDKIGDVKCGNNAKEA--MTAIAEA 709
Query: 122 AANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPNS 181
P + F KN + + L + G L + + ++ L N
Sbjct: 710 CMLPWTAEQVVSMAFSQKNPKNQSETLNWLSNAIKEFGFSGLNVKAFISNVKTALAATNP 769
Query: 182 QVRDAAINSLVEIYRHVGERVRADL-SKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
VR AAI L +Y +VG +R +K S+++ F K +
Sbjct: 770 AVRTAAITLLGVMYLYVGPSLRMFFEDEKPALLSQIDAEFEKMQGQSPPAPTRGISKHST 829
Query: 241 FDDEDSVDGNRPSSASSTSSKAPPSSR--RNVGMGTTRRLGSSTLGSKSSAAKEGAGAVD 298
++ DG+ P S+ P + + ++G + E AG ++
Sbjct: 830 SGTDEGEDGDEPDDGSNDVVDLLPRTEISDKITSELVSKIGDKNWKIRKEGLDEVAGIIN 889
Query: 299 EEDFIK 304
+ FI+
Sbjct: 890 DAKFIQ 895
Score = 42.7 bits (99), Expect = 0.003
Identities = 63/284 (22%), Positives = 111/284 (39%), Gaps = 34/284 (11%)
Query: 50 LVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVRE 109
LV L +N +V L L+ L L+ +F G V+P+++++ + K V +
Sbjct: 320 LVKALKKVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHVVPTILEKFKEKKPQVVQ 379
Query: 110 QDQTLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIV 169
Q + I Q + + +L +KN ++ L + + A TL S +
Sbjct: 380 ALQEAIDAIF-LTTTLQNISEDVLAVMDNKNPTIKQQTSLFIARSFRHCTASTLPKSLLK 438
Query: 170 PHICNLL---GDPNSQVRDAAINSLVEIYRHVGERV----RADLSKKGLPQSRLNVIFTK 222
P LL D +VRDAA +L + VGE+ AD+ K L + + +
Sbjct: 439 PFCAALLKHINDSAPEVRDAAFEALGTALKVVGEKAVNPFLADVDKLKLDKIKECSEKVE 498
Query: 223 FDEVQKSGNMIQSANDKNF-------------DDEDSVDGNRP-----SSASSTSSKAPP 264
+K+G +A+ K F D+D+ D + P A + + PP
Sbjct: 499 LIHGKKAG---LAADKKEFKPLPGRTAASGAAGDKDTKDISAPKPGPLKKAPAAKAGGPP 555
Query: 265 SSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEEDFIKAFDD 308
+ G G+ G+K+ E V+ E I+ ++
Sbjct: 556 KKGKPAAPG-----GAGNTGTKNKKGLETKEIVEPELSIEVCEE 594
Score = 42.0 bits (97), Expect = 0.005
Identities = 105/566 (18%), Positives = 196/566 (34%), Gaps = 39/566 (6%)
Query: 59 VNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKI 118
+N SN +V ++IL L + K + + +I LGD+K++VR +
Sbjct: 909 LNDSNKILVQQTLNILQQLAVAMGPNIKQHVKNLGIPIITVLGDSKNNVRAAALATVNAW 968
Query: 119 MDQAANPQYVWDRMLGG-FKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLG 177
+Q +++ L K +N R+ + L L + L VPH+ + L
Sbjct: 969 AEQTGMKEWLEGEDLSEELKKENPFLRQELLGWLAEKLPTLRSTPTDLILCVPHLYSCLE 1028
Query: 178 DPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIF----------------T 221
D N VR A ++L H+G A + K P S+ V+ T
Sbjct: 1029 DRNGDVRKKAQDALPFFMMHLGYEKMAKATGKLKPTSKDQVLAMLEKAKVNMPAKPAPPT 1088
Query: 222 KFDEVQKSGNMIQSANDKNFDDEDSVDGNRPSSASSTSSKAPP-SSRRNVGMGTTRRLGS 280
K G+ + ED + + +KAP SS+ G +++ S
Sbjct: 1089 KATSKPMGGSAPAKFQPASAPAEDCISSSTEPKPDPKKAKAPGLSSKAKSAQG--KKMPS 1146
Query: 281 STLGSKSSAAKEGAGAV----DEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKH 336
T K K G + +E +K + V++ + +E I +++ +S
Sbjct: 1147 KT-SLKEDEDKSGPIFIVVPNGKEQRMKDEKGLKVLKWNFTTPRDEYIEQLKTQMSSCVA 1205
Query: 337 DWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAK-------DLRSQVVREAC 389
W Q + A A D+ + G L K D + V+ +A
Sbjct: 1206 KWLQDEMFHSDFQHHNKALAVMVDHLESEKEGVIGCLDLILKWLTLRFFDTNTSVLMKAL 1265
Query: 390 ITLGHLSSVLGNKFDH----GAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRL 445
L L ++L + H A + +P + + ++ + + ++
Sbjct: 1266 EYLKLLFTLLSEEEYHLTENEASSFIPYLVVKVGEPKDVIRKDVRAILNRMCLVYPASKM 1325
Query: 446 IPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIE 505
P I SK+ R C E L L++ + + + + I I D D+ R
Sbjct: 1326 FPFIMEGTKSKNSKQRAECLEELGCLVESYGMNVCQPTPGKALKEIAVHIGDRDNAVRNA 1385
Query: 506 ARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNS---DSIVSLPQSDRSSSSSQES 562
A ++ + L L L+ +K S S + Q + +Q
Sbjct: 1386 ALNTIVTVYNVHGDQVFKLIGNLSEKDMSMLEERIKRSAKRPSAAPIKQVEEKPQRAQNI 1445
Query: 563 LNRPLSAKRSPTGSTTSRASTVSTKS 588
+ ++ P +S+ + + S
Sbjct: 1446 SSNANMLRKGPAEDMSSKLNQARSMS 1471
Score = 33.5 bits (75), Expect = 1.6
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 21/246 (8%)
Query: 1271 DAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLK 1330
D + D L EAV E L +P D D + ++ +ERK AL +
Sbjct: 260 DEVPQIDAYELLEAV-----EILSKLPKDFYDKI---------EAKKWQERKEALESVEV 305
Query: 1331 ITREDSLGVWEEHFKTILLLLLETLG-DKDHSIRALALRVLREILRNQPARFKNYAELTI 1389
+ + L + + ++ L + +G D + + ALA + L + +F YA +
Sbjct: 306 LIKNPKLEAGD--YADLVKALKKVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHVV 363
Query: 1390 MKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKV 1449
LE K+ +VV+A +EA + + + + + ++ + I +
Sbjct: 364 PTILEKFKEKKPQVVQALQEAIDAIFLTTTLQNISEDVLAVMDNKNPTIKQQTSLFIARS 423
Query: 1450 VERIAKESL-LQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGED-LKPHLAQLT 1507
+L LL LL+ +++ VR A+ L V+GE + P LA +
Sbjct: 424 FRHCTASTLPKSLLKPFCAALLKHINDSAPEVRDAAFEALGTALKVVGEKAVNPFLADV- 482
Query: 1508 GSKMKL 1513
K+KL
Sbjct: 483 -DKLKL 487
>gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens]
Length = 456
Score = 53.5 bits (127), Expect = 2e-06
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 20/227 (8%)
Query: 550 PQSDRSSSSSQESL---NRPLSAKRS--PTGSTTSRASTVSTKSVSTTGSLQRSRSDIDV 604
P S SS S+ES +RP S + P +TT S ST S S+ GS + +
Sbjct: 35 PASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTL--LPA 92
Query: 605 NAAASAKSKVSSSSGTTPFSSAAALPPGSYASL--GRIRTRRQSSGSATNVASTPDNRGR 662
+ S S+ S++S ++P S+ AL PGS +L G+ T SS +T+ PD+
Sbjct: 93 STTTSGPSQESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDS--T 150
Query: 663 SRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPP---VTPSSEKRSK 719
+ + +V S R S+ G+ + SP G G + P TPS +
Sbjct: 151 TSSGIVEASTRVHSS--TGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPPSTAT 208
Query: 720 IPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCS-RDTSRESSRDTS 765
P + + SP G ++ P S + G S + T SS D S
Sbjct: 209 APVEESTTYHRSP---GSTPTTHFPASSTTSGHSEKSTIFHSSPDAS 252
Score = 36.2 bits (82), Expect = 0.25
Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 35/278 (12%)
Query: 515 SHFSREAEHLYHTLESSYQKALQSHLKNSDS------IVSLPQSDRSSSSSQESLNRPLS 568
SH + H +S+ L H S S LP S +S SQES S
Sbjct: 50 SHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSS 109
Query: 569 AKRSPT----GSTTSRA-STVSTKSVSTTGSLQRS--RSDIDVNAAASAKSKVSSSSGT- 620
+ T GSTT+ + ST S+ GS + + A ++V SS+G+
Sbjct: 110 PGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSP 169
Query: 621 -TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANP 679
T S A++ PG L T Q+ ++T+ +P + + + + RS + P
Sbjct: 170 RTTLSPASSTSPG----LQGESTAFQTHPASTHTTPSPPSTATAPVEESTTYHRSPGSTP 225
Query: 680 AGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRE--TSPNRIGL 737
SS+ S + S TPSS + + G S E TS ++ G
Sbjct: 226 TTHFPASSTTSG--HSEKSTIFHSSPDASGTTPSSAHST----TSGVSEESSTSHSQPGS 279
Query: 738 ARSSRIPRPSMSQGCSRDT--------SRESSRDTSPA 767
++ P + + G S++ S E++ DT+P+
Sbjct: 280 THTTAFPDSTTTSGLSQEPTTSHSSQGSTEATLDTTPS 317
Score = 34.3 bits (77), Expect = 0.96
Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 9/158 (5%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
+S + L Q +S SSQ S L SP G TT+ VST S S +
Sbjct: 287 DSTTTSGLSQEPTTSHSSQGSTEATLDTTPSPPG-TTAAPVEVSTTYHSRPSSTPTTH-- 343
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGS--YASLGRIRTRRQSSGSATNVASTPDN 659
++ +S+ S++ ++P S+ PGS A L T SS + + +P +
Sbjct: 344 FSASSTTLGRSEESTTVHSSPGSTETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPAS 403
Query: 660 RGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGY 697
S S + SR G+ ++ PG GY
Sbjct: 404 TTSSGVSEESTTSHSR----PGSTHTTAFPGSTTMPGY 437
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 52.8 bits (125), Expect = 3e-06
Identities = 66/240 (27%), Positives = 96/240 (40%), Gaps = 39/240 (16%)
Query: 558 SSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVS-S 616
SS+ S++ S PT AS STKS + +RS + A S S +S S
Sbjct: 7 SSKPSMSLAPSGSSMPTADPKPPASLKSTKSATP------NRSLVPTKPATSRNSVMSPS 60
Query: 617 SSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQR--- 673
SS +T +S P +S R+R++ + + + V++ S+A V QR
Sbjct: 61 SSKSTKSTSTKRAPSNRPSSRSRVRSKAR---TPSRVSTDTRTSKASKASDVRCHQRRGT 117
Query: 674 -SRSANPAGAGSRSS--SPGKLLGSG----YGGLTG----------------GSSRGPPV 710
SR P GSRSS SP + G +G G G S G P
Sbjct: 118 HSRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRGKSYGRPR 177
Query: 711 TPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDT---SRESSRDTSPA 767
T + E+ PR+ P G+ RSS + + C T S+E S + SP+
Sbjct: 178 TSNRERSDSQPRNLSKKSYRPPGGSGIGRSSELAVTPSTAKCQTPTGIPSKEKSDNPSPS 237
Score = 52.8 bits (125), Expect = 3e-06
Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 14/232 (6%)
Query: 555 SSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKV 614
S+ S +S ++ S +RS +GS S V + S S RSR+ + + S+
Sbjct: 273 STRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQS 332
Query: 615 SSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRS 674
S S + + G + R ++ +S + + + D+RG S + S +S
Sbjct: 333 RSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQS 392
Query: 675 RSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIP-RSQGCSRETSPN 733
S N SRS SP K S P RS+ P +++ CSR SP
Sbjct: 393 GSPNKQRDHSRSRSPNK--------ARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPY 444
Query: 734 RIGLARSSRIPRPSMSQGCSR--DTSRESSRDTSPARGFPPLDRFGLGQPGR 783
+ SR P + SR + +R+ SR SP++ D LG P +
Sbjct: 445 KARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSK---ERDHSQLGSPSK 493
Score = 50.8 bits (120), Expect = 1e-05
Identities = 71/280 (25%), Positives = 112/280 (40%), Gaps = 37/280 (13%)
Query: 500 SEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSS 559
S AR RK G S R ++ H+ S ++ S + P +RS S S
Sbjct: 312 SRARSRTRK---GILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHS 368
Query: 560 QESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSG 619
+ S S +R GS++ R + ++S S SRS A ++S+
Sbjct: 369 RSS-----SKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSR------ 417
Query: 620 TTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDN-RGRSRAKVVSQSQ---RSR 675
Y + R R+R + + + +P R RSR++ ++++ RSR
Sbjct: 418 ------------SPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSR 465
Query: 676 SANPAGAGSRSSSPGKLLG-SGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRE----T 730
S N A SRS SP K S G + +PS E++ + RS R+
Sbjct: 466 SPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSR 525
Query: 731 SPNRIGLARSSRIPRPSMSQGCSRDTS--RESSRDTSPAR 768
SP++ R SR P + SR S RE + SP++
Sbjct: 526 SPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSK 565
Score = 45.4 bits (106), Expect = 4e-04
Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
+NS S +S +S+S+ + NRP S R S+A T S S T S S
Sbjct: 53 RNSVMSPSSSKSTKSTSTKRAPSNRPSSRSR-----VRSKARTPSRVSTDTRTSKASKAS 107
Query: 601 DIDVNAAASAKSKVSSSSGTTP---FSSAAALPPGSYASLGRIRTRRQSSGSATNVASTP 657
D+ + + + + S G TP S ++ P ++ GRIRT G A+ V +
Sbjct: 108 DVRCH-----QRRGTHSRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASRVRTPT 162
Query: 658 DNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEK 716
+ SR K R R++N + S+ + K GG G S VTPS+ K
Sbjct: 163 SQQKGSRGKSYG---RPRTSNRERSDSQPRNLSKKSYRPPGGSGIGRSSELAVTPSTAK 218
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sapiens]
Length = 2603
Score = 52.4 bits (124), Expect = 3e-06
Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 46/322 (14%)
Query: 552 SDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDV------N 605
S+++SS SQ +N S SPT +T+S ASTV S + + S R + V N
Sbjct: 1950 SNQNSSGSQ--VNSAGSLTSSPTTTTSSSASTVPGTSTNGSPSSPSVRRQLFVTVVKTSN 2007
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGS----YASLGRIRTRRQSSGSATNVASTPDNRG 661
A + + +S++ T P ++ +P +S Q G + N S D
Sbjct: 2008 ATTTTVTTTASNNNTAPTNATYPMPTAKEHYPVSSPSSPSPPAQPGGVSRN--SPLDCGS 2065
Query: 662 RSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIP 721
S KV S S++ + P + + P SG + + PP + S E R +
Sbjct: 2066 ASPNKVASSSEQEAGSPPVVETTNTRPPNSSSSSG-SSSAHSNQQQPPGSVSQEPRPPLQ 2124
Query: 722 RSQGCSRETSPNRIGLARSS-----------RIPRPSMSQGCSRDTSRESS--------R 762
+SQ E LA SS P P GC + T + +
Sbjct: 2125 QSQVPPPEVRMTVPPLATSSAPVAVPSTAPVTYPMPQTPMGCPQPTPKMETPAIRPPPHG 2184
Query: 763 DTSPARGFPPLDRFGLG--------QPGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRR 814
T+P + + + +P +P SV LST + + +V A KP+
Sbjct: 2185 TTAPHKNSASVQNSSVAVLSVNHIKRPHSVPSSVQLPSTLSTQSACQNSVHPA-NKPIAP 2243
Query: 815 RYE---PYGMYSDDDANSDASS 833
+ P+G +S NS S+
Sbjct: 2244 NFSAPLPFGPFSTLFENSPTSA 2265
>gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sapiens]
Length = 2352
Score = 52.4 bits (124), Expect = 3e-06
Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 46/322 (14%)
Query: 552 SDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDV------N 605
S+++SS SQ +N S SPT +T+S ASTV S + + S R + V N
Sbjct: 1699 SNQNSSGSQ--VNSAGSLTSSPTTTTSSSASTVPGTSTNGSPSSPSVRRQLFVTVVKTSN 1756
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGS----YASLGRIRTRRQSSGSATNVASTPDNRG 661
A + + +S++ T P ++ +P +S Q G + N S D
Sbjct: 1757 ATTTTVTTTASNNNTAPTNATYPMPTAKEHYPVSSPSSPSPPAQPGGVSRN--SPLDCGS 1814
Query: 662 RSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIP 721
S KV S S++ + P + + P SG + + PP + S E R +
Sbjct: 1815 ASPNKVASSSEQEAGSPPVVETTNTRPPNSSSSSG-SSSAHSNQQQPPGSVSQEPRPPLQ 1873
Query: 722 RSQGCSRETSPNRIGLARSS-----------RIPRPSMSQGCSRDTSRESS--------R 762
+SQ E LA SS P P GC + T + +
Sbjct: 1874 QSQVPPPEVRMTVPPLATSSAPVAVPSTAPVTYPMPQTPMGCPQPTPKMETPAIRPPPHG 1933
Query: 763 DTSPARGFPPLDRFGLG--------QPGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRR 814
T+P + + + +P +P SV LST + + +V A KP+
Sbjct: 1934 TTAPHKNSASVQNSSVAVLSVNHIKRPHSVPSSVQLPSTLSTQSACQNSVHPA-NKPIAP 1992
Query: 815 RYE---PYGMYSDDDANSDASS 833
+ P+G +S NS S+
Sbjct: 1993 NFSAPLPFGPFSTLFENSPTSA 2014
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 51.6 bits (122), Expect = 6e-06
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 33/218 (15%)
Query: 563 LNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTP 622
L R + +R S + + + G R +S + + AK SSSSGT P
Sbjct: 482 LRRKILTQRRERYRQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQP 541
Query: 623 FSSAAALP------------PGSYASLG---RIRTRRQSSGSATNVASTPDNRG---RSR 664
A A P PGS+AS R R+R +S + ST RG RSR
Sbjct: 542 APPAPASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSR 601
Query: 665 AKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQ 724
++ + +R RSA+P A S SSS + G GGS + RS+ +
Sbjct: 602 SR-EKRRRRRRSASPPPATSSSSSSRRERHRGKHRDGGGSKK-----KKKRSRSRGEKRS 655
Query: 725 GCSRETSPNRIGLARSSRIPRPSMSQGC-SRDTSRESS 761
G E +P + P PS S C RD+ R +
Sbjct: 656 GDGSEKAP--------APAPPPSGSTSCGDRDSRRRGA 685
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 51.2 bits (121), Expect = 8e-06
Identities = 69/260 (26%), Positives = 101/260 (38%), Gaps = 57/260 (21%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P D S ES + S RSPT + + +++ S D AAA+
Sbjct: 295 PTYDPYKRSPSESSSESRSRSRSPTPGREEKITFITSFGGS------------DEEAAAA 342
Query: 610 AKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVS 669
A + +++SG T A PG A RR+SS S+++ +++ + RS ++ S
Sbjct: 343 AAA--AAASGVTTGKPPAPPQPGGPAPGRNASARRRSSSSSSSSSASRTSSSRSSSRSSS 400
Query: 670 QSQ--------------RSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSE 715
+S+ RSRS + + + SR S + G + G GGS G + S
Sbjct: 401 RSRRGGGYYRSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSG--GGSRDGHRYSRSPA 458
Query: 716 KRSKI-PRSQGCSR--------------------------ETSPNRIGLARSSRIPRPSM 748
+R PR + SR SP+R SR PS
Sbjct: 459 RRGGYGPRRRSRSRSHSGDRYRRGGRGLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSP 518
Query: 749 SQGCSRDTSRESSRDTSPAR 768
SQ SR SR S SPAR
Sbjct: 519 SQSRSRSRSRSQSPSPSPAR 538
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 50.4 bits (119), Expect = 1e-05
Identities = 71/264 (26%), Positives = 110/264 (41%), Gaps = 24/264 (9%)
Query: 550 PQSDRSSSSSQESL---NRPLSAKRS--PTGSTTSRASTVSTKSVSTTGSLQRSRSDIDV 604
P S SS S+ES +RP S + P +TT S ST S S+ GS + +
Sbjct: 982 PASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTL--LPA 1039
Query: 605 NAAASAKSKVSSSSGTTPFSSAAALPPGSYASL--GRIRTRRQSSGSATNVASTPDNRGR 662
+ S S+ S++S ++ S+ AL PGS +L G+ T S+ +T+ PD+
Sbjct: 1040 STTTSGPSQESTTSHSSSGSTDTALSPGSTTALSFGQESTTFHSNPGSTHTTLFPDS--T 1097
Query: 663 SRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPP---VTPSSEKRSK 719
+ + +V S R S+ G+ + SP G G + P TPS +
Sbjct: 1098 TSSGIVEASTRVHSS--TGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPPSTAT 1155
Query: 720 IPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCS-RDTSRESSRD---TSPARGFPPLDR 775
P + + SP G ++ P S + G S + T SS D T+P+
Sbjct: 1156 APVEESTTYHRSP---GSTPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSG 1212
Query: 776 FGLGQPGRI-PGSVNAMRVLSTST 798
G RI PGS + ++T
Sbjct: 1213 RGESTTSRISPGSTEITTLPGSTT 1236
Score = 44.3 bits (103), Expect = 0.001
Identities = 61/219 (27%), Positives = 86/219 (39%), Gaps = 36/219 (16%)
Query: 572 SPTGSTTSRASTVSTKSVSTTGSLQRSR-SDIDVNAAASAKSKVSSSSGTTPFSSAAALP 630
SP STTS ST S+ GS Q + + S +S+ S SS T SS P
Sbjct: 1899 SPARSTTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISS----P 1954
Query: 631 PGSYASLGRIRTRRQSSGSATNVASTPDN---RGRSRAKVVSQSQR---------SRSAN 678
P + ++L T SS +T PD+ GRS S S + +RS
Sbjct: 1955 PSTTSALVEEPTSYHSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTT 2014
Query: 679 PAGAGSRSSSPGKLLGSGYGGLTG--GSSRGPPVTPSSEKRSKIPR------------SQ 724
G ++SP + SG T GS+ P ++ S PR S
Sbjct: 2015 SVLLGESTTSP---ISSGSMETTALPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSS 2071
Query: 725 GCSRE--TSPNRIGLARSSRIPRPSMSQGCSRDTSRESS 761
G S E TS +R G ++ P + + G SR ++ S
Sbjct: 2072 GVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHS 2110
Score = 43.5 bits (101), Expect = 0.002
Identities = 61/219 (27%), Positives = 85/219 (38%), Gaps = 36/219 (16%)
Query: 572 SPTGSTTSRASTVSTKSVSTTGSLQRSR-SDIDVNAAASAKSKVSSSSGTTPFSSAAALP 630
SP STTS ST S+ GS Q + D + +S S SS T SSA
Sbjct: 3456 SPARSTTSGLVEESTTYHSSPGSTQTMHFPESDTTSGRGEESTTSHSSTTHTISSA---- 3511
Query: 631 PGSYASLGRIRTRRQSSGSATNVASTPDN---RGRSRAKVVSQSQR---------SRSAN 678
P + ++L T SS +T PD+ GRS S S + +RS
Sbjct: 3512 PSTTSALVEEPTSYHSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTT 3571
Query: 679 PAGAGSRSSSPGKLLGSGYGGLTG--GSSRGPPVTPSSEKRSKIPR------------SQ 724
G ++SP + SG T GS+ P ++ S PR S
Sbjct: 3572 SVLLGESTTSP---ISSGSMETTALPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSS 3628
Query: 725 GCSRE--TSPNRIGLARSSRIPRPSMSQGCSRDTSRESS 761
G S E TS +R G ++ P + + G SR ++ S
Sbjct: 3629 GVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHS 3667
Score = 42.4 bits (98), Expect = 0.004
Identities = 63/250 (25%), Positives = 92/250 (36%), Gaps = 18/250 (7%)
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLSAKRS-----PTGSTTSRASTVSTKSVSTTGSLQR 597
S + P S +S S+ES S + P STTS ST S ++GS++
Sbjct: 3531 STATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMET 3590
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVAS 655
+ + + S+ S++ ++P S A L P S S G T S +T+ +
Sbjct: 3591 TA--LPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTA 3648
Query: 656 TPDNR---GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTP 712
PD+ G SR S S + S ++S GS T SS G T
Sbjct: 3649 FPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTS-----GSSQESTTSHSSSGSTDTA 3703
Query: 713 SSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPP 772
S S S G T + G ++ P + S G ++R S SP P
Sbjct: 3704 LS-PGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSP 3762
Query: 773 LDRFGLGQPG 782
G G
Sbjct: 3763 ASSTSPGLQG 3772
Score = 42.4 bits (98), Expect = 0.004
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Query: 543 SDSIVSLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQR 597
S +LP S ++ S++S R SP +T+S S ST S S GS+
Sbjct: 4312 STETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSMHT 4371
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS--YASLGRIRTRRQSSGSATNVAS 655
+ + S+ S++S ++P S+ L PGS +SLG T SS +T
Sbjct: 4372 TA--FPSSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTL 4429
Query: 656 TPDNRGRSRAKVVSQSQRSRSANP 679
PDN S S S + +P
Sbjct: 4430 LPDNTTASGLLEASTPVHSSTGSP 4453
Score = 41.2 bits (95), Expect = 0.008
Identities = 67/280 (23%), Positives = 105/280 (37%), Gaps = 24/280 (8%)
Query: 515 SHFSREAEHLYHTLESSYQKALQSHLKNSDS------IVSLPQSDRSSSSSQESLNRPLS 568
SH + H +S+ L H S S LP S +S SSQES S
Sbjct: 3637 SHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGSSQESTTSHSS 3696
Query: 569 AKRSPT----GSTTSRA-STVSTKSVSTTGSLQRS--RSDIDVNAAASAKSKVSSSSGT- 620
+ + T GSTT+ + ST S+ GS + + A ++V SS+G+
Sbjct: 3697 SGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSP 3756
Query: 621 -TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANP 679
T S A++ PG L T Q+ ++T+ +P + + + + RS + P
Sbjct: 3757 RTTLSPASSTSPG----LQGESTAFQTHPASTHTTPSPPSTATAPVEESTTYHRSPGSTP 3812
Query: 680 AGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLAR 739
SS+ S + S TPSS + R + + SP G
Sbjct: 3813 TTHFPASSTTSG--HSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISP---GSTE 3867
Query: 740 SSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGLG 779
+ +P + + G S ++ S SP P LG
Sbjct: 3868 ITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLG 3907
Score = 40.8 bits (94), Expect = 0.010
Identities = 62/250 (24%), Positives = 92/250 (36%), Gaps = 18/250 (7%)
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLSAKRS-----PTGSTTSRASTVSTKSVSTTGSLQR 597
S + P S +S S+ES S + P STTS ST S ++GS++
Sbjct: 891 STATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMET 950
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVAS 655
+ + + S+ S++ ++P S A L P S S G T +S +T+ +
Sbjct: 951 TA--LPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTA 1008
Query: 656 TPDNR---GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTP 712
PD+ G SR S S + S ++S G T SS G T
Sbjct: 1009 FPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTS-----GPSQESTTSHSSSGSTDTA 1063
Query: 713 SSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPP 772
S S S G T + G ++ P + S G ++R S SP P
Sbjct: 1064 LS-PGSTTALSFGQESTTFHSNPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSP 1122
Query: 773 LDRFGLGQPG 782
G G
Sbjct: 1123 ASSTSPGLQG 1132
Score = 40.8 bits (94), Expect = 0.010
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 543 SDSIVSLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQR 597
S +LP S ++ S++S R SP +T+S S ST S S GS
Sbjct: 1672 STETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSTHT 1731
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVAS 655
+ + S+ S++S ++P S+ L PGS +SLG T SS +T
Sbjct: 1732 TA--FPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTL 1789
Query: 656 TPDNRGRSRAKVVSQSQRSRSANP 679
PDN S S S + +P
Sbjct: 1790 LPDNTTASGLLEASTPVHSSTGSP 1813
Score = 40.0 bits (92), Expect = 0.017
Identities = 62/250 (24%), Positives = 91/250 (36%), Gaps = 18/250 (7%)
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLSAKRS-----PTGSTTSRASTVSTKSVSTTGSLQR 597
S + P S +S S+ES S + P STTS ST S ++GS++
Sbjct: 1974 STATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMET 2033
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVAS 655
+ + + S+ S++ ++P S A L P S S G T S +T+ +
Sbjct: 2034 TA--LPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTA 2091
Query: 656 TPDNR---GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTP 712
PD+ G SR S S + S ++S G T SS G T
Sbjct: 2092 FPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTS-----GPSQESTTSHSSPGSTDTA 2146
Query: 713 SSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPP 772
S S S G T + G ++ P + S G ++R S SP P
Sbjct: 2147 LS-PGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSP 2205
Query: 773 LDRFGLGQPG 782
G G
Sbjct: 2206 ASSTSPGLQG 2215
Score = 38.1 bits (87), Expect = 0.066
Identities = 44/151 (29%), Positives = 60/151 (39%), Gaps = 8/151 (5%)
Query: 540 LKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSR 599
L S + L + + SS S +R LS R+ T S S ST S T ++
Sbjct: 267 LPGSTTTAGLSEKSTTFYSSPRSPDRTLSPART-TSSGVSEKSTTSHSRPGPTHTIAFPD 325
Query: 600 SDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVASTP 657
S S+ S++S + P S+ L PG+ +SLG T SS T P
Sbjct: 326 S-----TTMPGVSQESTASHSIPGSTDTTLSPGTTTPSSLGPESTTFHSSPGYTKTTRLP 380
Query: 658 DNRGRSRAKVVSQSQRSRSANPAGAGSRSSS 688
DN S S S + +P S SSS
Sbjct: 381 DNTTTSGLLEASTPVHSSTGSPHTTLSPSSS 411
Score = 37.0 bits (84), Expect = 0.15
Identities = 75/342 (21%), Positives = 124/342 (36%), Gaps = 77/342 (22%)
Query: 527 TLESSYQKALQSHL-KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT----GSTT--- 578
T +++ SH +++ + LP +S ES P+S+ T GSTT
Sbjct: 1985 TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPG 2044
Query: 579 -------------SRASTVSTKSVSTTGSLQRSRSD------------------------ 601
S A+T+S S +++G + S +
Sbjct: 2045 LSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRH 2104
Query: 602 ---------------IDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASL--GRIRTRR 644
+ + S S+ S++S ++P S+ AL PGS +L G+ T
Sbjct: 2105 STTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTALSPGSTTALSFGQESTTF 2164
Query: 645 QSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGS 704
SS +T+ PD+ + + +V S R S+ G+ + SP G G +
Sbjct: 2165 HSSPGSTHTTLFPDS--TTSSGIVEASTRVHSS--TGSPRTTLSPASSTSPGLQGESTAF 2220
Query: 705 SRGPP---VTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCS-RDTSRES 760
P TPS + P + + SP G ++ P S + G S + T S
Sbjct: 2221 QTHPASTHTTPSPPSTATAPVEESTTYHRSP---GSTPTTHFPASSTTSGHSEKSTIFHS 2277
Query: 761 SRD---TSPARGFPPLDRFGLGQPGRI-PGSVNAMRVLSTST 798
S D T+P+ G RI PGS + ++T
Sbjct: 2278 SPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTLPGSTT 2319
Score = 36.6 bits (83), Expect = 0.19
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQ 596
+S +LP S + S S++S R A SP +T+S S S+ S S GS
Sbjct: 2977 SSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTH 3036
Query: 597 RSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS--YASLGRIRTRRQSSGSATNVA 654
+ + S S+ ++S ++ S+ A L PGS +SLG+ T SS T
Sbjct: 3037 TTA--FPDSTTTSGLSQEPTASHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETT 3094
Query: 655 STPDN 659
PD+
Sbjct: 3095 LLPDD 3099
Score = 36.6 bits (83), Expect = 0.19
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQ 596
+S +LP S + S S++S R A SP +T+S S S+ S S GS
Sbjct: 4060 SSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTH 4119
Query: 597 RSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS--YASLGRIRTRRQSSGSATNVA 654
+ + S S+ ++S ++ S+ A L PGS +SLG+ T SS T
Sbjct: 4120 TTA--FPDSTTTSGLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETT 4177
Query: 655 STPDN 659
PD+
Sbjct: 4178 LLPDD 4182
Score = 36.2 bits (82), Expect = 0.25
Identities = 56/242 (23%), Positives = 90/242 (37%), Gaps = 14/242 (5%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD---IDVN 605
LP + ++ +ES P S+ + T + +R++T ST L S ++ + +
Sbjct: 2454 LPATLTTADLGEESTTFPSSSGSTGTTLSPARSTTSGLVGESTPSRLSPSSTETTTLPGS 2513
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNR--- 660
+ S+ S++ T+P S A L P + S G + S +T+ + PD+
Sbjct: 2514 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTP 2573
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
G SR S S + S ++S G T SS G T S S
Sbjct: 2574 GLSRHSTTSHSSPGSTDTTLLPASTTTS-----GPSQESTTSHSSPGSTDTALS-PGSTT 2627
Query: 721 PRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGLGQ 780
S G T + G ++ P + S G ++R S SP P G
Sbjct: 2628 ALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGL 2687
Query: 781 PG 782
G
Sbjct: 2688 QG 2689
Score = 35.8 bits (81), Expect = 0.33
Identities = 67/283 (23%), Positives = 109/283 (38%), Gaps = 45/283 (15%)
Query: 527 TLESSYQKALQSHL-KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT----GSTT--- 578
T +++ SH +++ + LP +S ES P+S+ T GSTT
Sbjct: 902 TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPG 961
Query: 579 -------------SRASTVSTKSVSTTG-----SLQRSR------SDIDVNAAASAKSKV 614
S A+T+S S +++G + RSR + + S+
Sbjct: 962 LSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRH 1021
Query: 615 SSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQ 672
S++S ++P S+ L P S + G + T SS +T+ A +P G + A Q
Sbjct: 1022 STTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSSGSTDTALSP---GSTTALSFGQES 1078
Query: 673 RSRSANPAGAGSRSSSPGKLLGSGY--GGLTGGSSRGPPVTPSSEKRSKIPRSQGCSR-- 728
+ +NP G+ + P SG SS G P T S S P QG S
Sbjct: 1079 TTFHSNP-GSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAF 1137
Query: 729 ETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFP 771
+T P ++ P + + T+ S ++P FP
Sbjct: 1138 QTHP---ASTHTTPSPPSTATAPVEESTTYHRSPGSTPTTHFP 1177
Score = 35.8 bits (81), Expect = 0.33
Identities = 54/237 (22%), Positives = 90/237 (37%), Gaps = 15/237 (6%)
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLSAKRS-----PTGSTTSRASTVSTKSVSTTGSLQR 597
S + P S +S S+ES S + P STTS ST S ++GS++
Sbjct: 4614 STATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMET 4673
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTP 657
+ + + S+ S++ ++P S+ S +LGR S A+TP
Sbjct: 4674 TA--LPGSTTTPGLSEKSTTFHSSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTP 4731
Query: 658 DNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKR 717
+ + +V +S S+ + G T SS ++
Sbjct: 4732 SPARSTTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTT 4791
Query: 718 SKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRD-TSRESSRDTSPARGFPPL 773
S + + S +SP I ++ P S + G S + T+ SS DT+ G PL
Sbjct: 4792 SALV-EEPTSYHSSPGSIA---TTHFPESSTTSGRSEESTASHSSPDTN---GITPL 4841
Score = 35.0 bits (79), Expect = 0.56
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 22/233 (9%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD---IDVN 605
LP + ++ +ES P S+ + T + +R++T ST L S ++ + +
Sbjct: 1371 LPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGS 1430
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNRGRS 663
+ S+ S++ T+P S A L P + S G + S +T+ + PD+ S
Sbjct: 1431 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTS 1490
Query: 664 RAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPR- 722
+ + S + G+ + SPG S G S +P + + +P
Sbjct: 1491 DL----SQEPTTSHSSQGSTEATLSPGSTTASS----LGQQSTTFHSSPGDTETTLLPDD 1542
Query: 723 --SQGCSRETSP--NRIGLARSSRIPRPSMSQGCSRDT----SRESSRDTSPA 767
+ G ++P + G ++ P S S G ++ S SS DT+P+
Sbjct: 1543 TITSGLVEASTPTHSSTGSLHTTLTPASSTSAGLQEESTTFQSWPSSSDTTPS 1595
Score = 35.0 bits (79), Expect = 0.56
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 22/233 (9%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD---IDVN 605
LP + ++ +ES P S+ + T + +R++T ST L S ++ + +
Sbjct: 2928 LPATLTTADLGEESTTFPSSSGSTGTTLSPARSTTSGLVGESTPSRLSPSSTETTTLPGS 2987
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNRGRS 663
+ S+ S++ T+P S A L P + S G + S +T+ + PD+ S
Sbjct: 2988 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTS 3047
Query: 664 RAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPR- 722
+ + S + G+ + SPG S G S +P + + +P
Sbjct: 3048 GL----SQEPTASHSSQGSTEATLSPGSTTASS----LGQQSTTFHSSPGDTETTLLPDD 3099
Query: 723 --SQGCSRETSP--NRIGLARSSRIPRPSMSQGCSRDT----SRESSRDTSPA 767
+ G ++P + G ++ P S S G ++ S SS DT+P+
Sbjct: 3100 TITSGLVEASTPTHSSTGSLHTTLTPASSTSAGLQEESTTFQSWPSSSDTTPS 3152
Score = 35.0 bits (79), Expect = 0.56
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 22/233 (9%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD---IDVN 605
LP + ++ +ES P S+ + T + +R++T ST L S ++ + +
Sbjct: 4011 LPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGS 4070
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNRGRS 663
+ S+ S++ T+P S A L P + S G + S +T+ + PD+ S
Sbjct: 4071 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTS 4130
Query: 664 RAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPR- 722
+ + S + G+ + SPG S G S +P + + +P
Sbjct: 4131 GL----SQEPTTSHSSQGSTEATLSPGSTTASS----LGQQSTTFHSSPGDTETTLLPDD 4182
Query: 723 --SQGCSRETSP--NRIGLARSSRIPRPSMSQGCSRDT----SRESSRDTSPA 767
+ G ++P + G ++ P S S G ++ S SS DT+P+
Sbjct: 4183 TITSGLVEASTPTHSSTGSLHTTLTPASSTSTGLQEESTTFQSWPSSSDTTPS 4235
Score = 34.7 bits (78), Expect = 0.73
Identities = 74/311 (23%), Positives = 111/311 (35%), Gaps = 31/311 (9%)
Query: 548 SLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDI 602
+LP S S++S R P T+S S ST S S GS +
Sbjct: 622 ALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSHSRPGSTHTTA--F 679
Query: 603 DVNAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVASTPDNR 660
+ S+ S++S ++P + L PGS +SLG T S +T PDN
Sbjct: 680 PGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSRPGSTETTLLPDNT 739
Query: 661 GRS----RAKVVSQSQRS--RSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSS 714
S + V S RS + +PAG+ +R + + +R P T +S
Sbjct: 740 TASGLLEASMPVHSSTRSPHTTLSPAGSTTRQGESTTF----HSWPSSKDTRPAPPTTTS 795
Query: 715 EKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLD 774
S G SP+ I S R + S T+ SS ++ FP D
Sbjct: 796 AFVEPSTTSHG-----SPSSIPTTHIS--ARSTTSGLVEESTTYHSSPGSTQTMHFPESD 848
Query: 775 -RFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASS 833
G G+ S + S + A V ++P P + +S +S
Sbjct: 849 TTSGRGEESTTSHSSTTHTISSAPSTTSALV----EEPTSYHSSPGSTATTHFPDSSTTS 904
Query: 834 VCSERSYGSRN 844
SE S S +
Sbjct: 905 GRSEESTASHS 915
Score = 34.7 bits (78), Expect = 0.73
Identities = 69/313 (22%), Positives = 117/313 (37%), Gaps = 64/313 (20%)
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLS------AKRSPTGSTTSRA--STVSTKSVSTTGS 594
+ +V R S SS E+ P S +++S T T+ R+ +T+S + +++G
Sbjct: 2488 TSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGV 2547
Query: 595 LQRSRSD---------------------------------------IDVNAAASAKSKVS 615
+ S + + + S S+ S
Sbjct: 2548 SEESSTSHSQPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQES 2607
Query: 616 SSSGTTPFSSAAALPPGSYASL--GRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQR 673
++S ++P S+ AL PGS +L G+ T SS +T+ PD+ + + +V S R
Sbjct: 2608 TTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDS--TTSSGIVEASTR 2665
Query: 674 SRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPP---VTPSSEKRSKIPRSQGCSRET 730
S+ G+ + SP G G + P TPS + P + +
Sbjct: 2666 VHSS--TGSPRTTLSPASSTSPGLQGESTTFQTHPASTHTTPSPPSTATAPVEESTTYHR 2723
Query: 731 SPNRIGLARSSRIPRPSMSQGCS-RDTSRESSRD---TSPARGFPPLDRFGLGQPGRI-P 785
SP G ++ P S + G S + T SS D T+P+ G RI P
Sbjct: 2724 SP---GSTPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISP 2780
Query: 786 GSVNAMRVLSTST 798
GS + ++T
Sbjct: 2781 GSTEITTLPGSTT 2793
Score = 34.7 bits (78), Expect = 0.73
Identities = 53/222 (23%), Positives = 85/222 (38%), Gaps = 22/222 (9%)
Query: 527 TLESSYQKALQSHL-KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVS 585
T +++ SH +++ + LP +S ES P+S+ T + +T
Sbjct: 3542 TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPG 3601
Query: 586 TKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTT---PFSSAAALPPGSYAS--LGRI 640
STT ++ A++ S VS S T+ P S+ P S + L R
Sbjct: 3602 LSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRH 3661
Query: 641 RTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYG-- 698
T SS +T+ P + S S + + S + +G+ + SPG +G
Sbjct: 3662 STTSHSSPGSTDTTLLPASTTTSG----SSQESTTSHSSSGSTDTALSPGSTTALSFGQE 3717
Query: 699 GLTGGSSRG-------PPVTPSS---EKRSKIPRSQGCSRET 730
T SS G P T SS E +++ S G R T
Sbjct: 3718 STTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTT 3759
Score = 34.7 bits (78), Expect = 0.73
Identities = 46/173 (26%), Positives = 65/173 (37%), Gaps = 22/173 (12%)
Query: 572 SPTGSTTSRASTVSTKSVSTTGSLQRSR-SDIDVNAAASAKSKVSSSSGTTPFSSAAALP 630
SP STTS ST S+ GS Q + + + +S S SS T SSA
Sbjct: 4539 SPARSTTSGLVEESTTYHSSPGSTQTMHFPESNTTSGRGEESTTSHSSTTHTISSA---- 4594
Query: 631 PGSYASLGRIRTRRQSSGSATNVASTPDN---RGRSRAKVVSQSQR---------SRSAN 678
P + ++L T SS +T PD+ GRS S S + +RS
Sbjct: 4595 PSTTSALVEEPTSYHSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTT 4654
Query: 679 PAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETS 731
G ++SP G + + G TP ++S S S T+
Sbjct: 4655 SVLLGESTTSP-----ISSGSMETTALPGSTTTPGLSEKSTTFHSSPSSTPTT 4702
Score = 33.9 bits (76), Expect = 1.2
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 19/191 (9%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRS-----PTGSTTSRASTVSTKSVSTTGSLQRSRSDIDV 604
P+S +S S+ES S + P TTS ST + GS++ + +
Sbjct: 4814 PESSTTSGRSEESTASHSSPDTNGITPLPAHFTTSGRIAESTTFYISPGSMETTLASTAT 4873
Query: 605 NAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVASTPDNRGR 662
SAKS + SS +P + L P S +S+ T S +T+ + P +
Sbjct: 4874 TPGLSAKSTILYSSSRSPDQT---LSPASMTSSSISGEPTSLYSQAESTHTTAFPASTTT 4930
Query: 663 SRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGG--LTGGSSRGPPVTPSSEKRSKI 720
S +SQ + + P G+ + SPG + S + T S G ++ S + +
Sbjct: 4931 SG---LSQESTTFHSKP-GSTETTLSPGSITTSSFAQEFTTPHSQPGSALSTVSPASTTV 4986
Query: 721 PRSQGCSRETS 731
P G S E++
Sbjct: 4987 P---GLSEEST 4994
Score = 33.5 bits (75), Expect = 1.6
Identities = 43/165 (26%), Positives = 65/165 (39%), Gaps = 14/165 (8%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P S +S S++S S S T + +S ST S + STT + ++I ++
Sbjct: 2734 PASSTTSGHSEKSTIFHSSPDASGT-TPSSAHSTTSGRGESTTSRISPGSTEITTLPGST 2792
Query: 610 AKSKVSSSSGT---TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAK 666
+S +S T +P S L P S SLG +S+ S + ST +
Sbjct: 2793 TTPGLSEASTTFYSSPRSPTTTLSPASMTSLG---VGEESTTSRSQPGSTHSTVSPASTT 2849
Query: 667 VVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVT 711
S+ S + SSSPG + + T S RG T
Sbjct: 2850 TPGLSEESTTV-------YSSSPGSTETTVFPRSTTTSVRGEEPT 2887
Score = 33.1 bits (74), Expect = 2.1
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P S +S S++S S S T + +S ST S + STT + ++I ++
Sbjct: 1177 PASSTTSGHSEKSTIFHSSPDASGT-TPSSAHSTTSGRGESTTSRISPGSTEITTLPGST 1235
Query: 610 AKSKVSSSSGT---TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAK 666
+S +S T +P S L P S SLG +S+ S + ST +
Sbjct: 1236 TTPGLSEASTTFYSSPRSPTTTLSPASMTSLG---VGEESTTSRSQPGSTHSTVSPASTT 1292
Query: 667 VVSQSQRSRSANPAGAGSRSSS 688
S+ S + + GS ++
Sbjct: 1293 TPGLSEESTTVYSSSRGSTETT 1314
Score = 33.1 bits (74), Expect = 2.1
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P S +S S++S S S T + +S ST S + STT + ++I ++
Sbjct: 2260 PASSTTSGHSEKSTIFHSSPDASGT-TPSSAHSTTSGRGESTTSRISPGSTEITTLPGST 2318
Query: 610 AKSKVSSSSGT---TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAK 666
+S +S T +P S L P S SLG +S+ S + ST +
Sbjct: 2319 TTPGLSEASTTFYSSPRSPTTTLSPASMTSLG---VGEESTTSRSQPGSTHSTVSPASTT 2375
Query: 667 VVSQSQRSRSANPAGAGSRSSS 688
S+ S + + GS ++
Sbjct: 2376 TPGLSEESTTVYSSSPGSTETT 2397
Score = 33.1 bits (74), Expect = 2.1
Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 7/216 (3%)
Query: 553 DRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVN--AAASA 610
D +++S + P+ + +T S A + + + STT + D SA
Sbjct: 4432 DNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPNSKDTTPAPPTTTSA 4491
Query: 611 KSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQ 670
++S++S +P S+ S +LGR S A+TP + + +V +
Sbjct: 4492 FVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEE 4551
Query: 671 SQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRET 730
S S+ + G G T SS ++ + S + + S +
Sbjct: 4552 STTYHSSPGSTQTMHFPESNTTSGRGEESTTSHSSTTHTISSAPSTTSALV-EEPTSYHS 4610
Query: 731 SPNRIGLARSSRIPRPSMSQGCSRD-TSRESSRDTS 765
SP G ++ P S + G S + T+ SS+D +
Sbjct: 4611 SP---GSTATTHFPDSSTTSGRSEESTASHSSQDAT 4643
Score = 32.7 bits (73), Expect = 2.8
Identities = 56/263 (21%), Positives = 93/263 (35%), Gaps = 18/263 (6%)
Query: 515 SHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT 574
+HFS + TL S + + P +S E P+S+ + T
Sbjct: 3177 THFSASST----TLGRSEESTTVHSSPGATGTALFPTRSATSVLVGEPTTSPISSGSTET 3232
Query: 575 GSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTT---PFSSAAALPP 631
+ +T STT D ++ A++ S VS S T+ P S+ P
Sbjct: 3233 TALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSTHTTAFP 3292
Query: 632 GSYASLG--RIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSP 689
GS G + T SS +T+ +P G + A + + + P G+ + P
Sbjct: 3293 GSTTMPGVSQESTASHSSPGSTDTTLSP---GSTTASSLGPESTTFHSGP-GSTETTLLP 3348
Query: 690 GKLLGSGY--GGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPS 747
SG SS G P T S S + + + ++ PN ++ P +
Sbjct: 3349 DNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPNS---KDTTPAPPTT 3405
Query: 748 MSQGCSRDTSRESSRDTSPARGF 770
S T+ S ++P F
Sbjct: 3406 TSAFVELSTTSHGSPSSTPTTHF 3428
Score = 32.7 bits (73), Expect = 2.8
Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 7/216 (3%)
Query: 553 DRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVN--AAASA 610
D +++S + P+ + +T S A + + + STT + D SA
Sbjct: 3349 DNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPNSKDTTPAPPTTTSA 3408
Query: 611 KSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQ 670
++S++S +P S+ S +LGR S A+TP + + +V +
Sbjct: 3409 FVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEE 3468
Query: 671 SQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRET 730
S S+ + G G T SS ++ + S + + S +
Sbjct: 3469 STTYHSSPGSTQTMHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALV-EEPTSYHS 3527
Query: 731 SPNRIGLARSSRIPRPSMSQGCSRD-TSRESSRDTS 765
SP G ++ P S + G S + T+ SS+D +
Sbjct: 3528 SP---GSTATTHFPDSSTTSGRSEESTASHSSQDAT 3560
Score = 32.0 bits (71), Expect = 4.7
Identities = 56/268 (20%), Positives = 93/268 (34%), Gaps = 28/268 (10%)
Query: 515 SHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT 574
+HFS + TL S + + P +S E P+S+ + T
Sbjct: 4260 THFSASST----TLGRSEESTTVHSSPGATGTALFPTRSATSVLVGEPTTSPISSGSTET 4315
Query: 575 GSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSS----------GTTPFS 624
+ +T STT D ++ A++ S VS S TT F
Sbjct: 4316 TALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSMHTTAFP 4375
Query: 625 SAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGS 684
S+ +P S S T SS +T+ +P G + A + + ++P G+
Sbjct: 4376 SSTTMPGVSQES-----TASHSSPGSTDTTLSP---GSTTASSLGPESTTFHSSP-GSTE 4426
Query: 685 RSSSPGKLLGSGY--GGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSR 742
+ P SG SS G P T S S + + + ++ PN ++
Sbjct: 4427 TTLLPDNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPNS---KDTTP 4483
Query: 743 IPRPSMSQGCSRDTSRESSRDTSPARGF 770
P + S T+ S ++P F
Sbjct: 4484 APPTTTSAFVELSTTSHGSPSSTPTTHF 4511
Score = 31.2 bits (69), Expect = 8.1
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 21/174 (12%)
Query: 527 TLESSYQKALQSHL-KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT----GSTT--- 578
T +++ SH +++ + LP +S ES P+S+ T GSTT
Sbjct: 4625 TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPG 4684
Query: 579 -SRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASL 637
S ST S S+T + S S + +S+ S++ ++P ++A P +
Sbjct: 4685 LSEKSTTFHSSPSSTPTTHFSASSTTLG-----RSEESTTVHSSPVATATTPSPARSTTS 4739
Query: 638 GRIR--TRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSP 689
G + T SS +T P++ S +S+ SR+++ + + SS P
Sbjct: 4740 GLVEESTAYHSSPGSTQTMHFPESSTAS-----GRSEESRTSHSSTTHTISSPP 4788
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 50.4 bits (119), Expect = 1e-05
Identities = 71/264 (26%), Positives = 110/264 (41%), Gaps = 24/264 (9%)
Query: 550 PQSDRSSSSSQESL---NRPLSAKRS--PTGSTTSRASTVSTKSVSTTGSLQRSRSDIDV 604
P S SS S+ES +RP S + P +TT S ST S S+ GS + +
Sbjct: 469 PASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTL--LPA 526
Query: 605 NAAASAKSKVSSSSGTTPFSSAAALPPGSYASL--GRIRTRRQSSGSATNVASTPDNRGR 662
+ S S+ S++S ++ S+ AL PGS +L G+ T S+ +T+ PD+
Sbjct: 527 STTTSGPSQESTTSHSSSGSTDTALSPGSTTALSFGQESTTFHSNPGSTHTTLFPDS--T 584
Query: 663 SRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPP---VTPSSEKRSK 719
+ + +V S R S+ G+ + SP G G + P TPS +
Sbjct: 585 TSSGIVEASTRVHSS--TGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPPSTAT 642
Query: 720 IPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCS-RDTSRESSRD---TSPARGFPPLDR 775
P + + SP G ++ P S + G S + T SS D T+P+
Sbjct: 643 APVEESTTYHRSP---GSTPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSG 699
Query: 776 FGLGQPGRI-PGSVNAMRVLSTST 798
G RI PGS + ++T
Sbjct: 700 RGESTTSRISPGSTEITTLPGSTT 723
Score = 40.8 bits (94), Expect = 0.010
Identities = 62/250 (24%), Positives = 92/250 (36%), Gaps = 18/250 (7%)
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLSAKRS-----PTGSTTSRASTVSTKSVSTTGSLQR 597
S + P S +S S+ES S + P STTS ST S ++GS++
Sbjct: 378 STATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMET 437
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVAS 655
+ + + S+ S++ ++P S A L P S S G T +S +T+ +
Sbjct: 438 TA--LPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTA 495
Query: 656 TPDNR---GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTP 712
PD+ G SR S S + S ++S G T SS G T
Sbjct: 496 FPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTS-----GPSQESTTSHSSSGSTDTA 550
Query: 713 SSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPP 772
S S S G T + G ++ P + S G ++R S SP P
Sbjct: 551 LS-PGSTTALSFGQESTTFHSNPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSP 609
Query: 773 LDRFGLGQPG 782
G G
Sbjct: 610 ASSTSPGLQG 619
Score = 40.8 bits (94), Expect = 0.010
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 543 SDSIVSLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQR 597
S +LP S ++ S++S R SP +T+S S ST S S GS
Sbjct: 1159 STETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSTHT 1218
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVAS 655
+ + S+ S++S ++P S+ L PGS +SLG T SS +T
Sbjct: 1219 TA--FPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTL 1276
Query: 656 TPDNRGRSRAKVVSQSQRSRSANP 679
PDN S S S + +P
Sbjct: 1277 LPDNTTASGLLEASTPVHSSTGSP 1300
Score = 35.8 bits (81), Expect = 0.33
Identities = 67/283 (23%), Positives = 109/283 (38%), Gaps = 45/283 (15%)
Query: 527 TLESSYQKALQSHL-KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT----GSTT--- 578
T +++ SH +++ + LP +S ES P+S+ T GSTT
Sbjct: 389 TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPG 448
Query: 579 -------------SRASTVSTKSVSTTG-----SLQRSR------SDIDVNAAASAKSKV 614
S A+T+S S +++G + RSR + + S+
Sbjct: 449 LSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRH 508
Query: 615 SSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQ 672
S++S ++P S+ L P S + G + T SS +T+ A +P G + A Q
Sbjct: 509 STTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSSGSTDTALSP---GSTTALSFGQES 565
Query: 673 RSRSANPAGAGSRSSSPGKLLGSGY--GGLTGGSSRGPPVTPSSEKRSKIPRSQGCSR-- 728
+ +NP G+ + P SG SS G P T S S P QG S
Sbjct: 566 TTFHSNP-GSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAF 624
Query: 729 ETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFP 771
+T P ++ P + + T+ S ++P FP
Sbjct: 625 QTHP---ASTHTTPSPPSTATAPVEESTTYHRSPGSTPTTHFP 664
Score = 35.0 bits (79), Expect = 0.56
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 22/233 (9%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD---IDVN 605
LP + ++ +ES P S+ + T + +R++T ST L S ++ + +
Sbjct: 858 LPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGS 917
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNRGRS 663
+ S+ S++ T+P S A L P + S G + S +T+ + PD+ S
Sbjct: 918 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTS 977
Query: 664 RAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPR- 722
+ + S + G+ + SPG S G S +P + + +P
Sbjct: 978 DL----SQEPTTSHSSQGSTEATLSPGSTTASS----LGQQSTTFHSSPGDTETTLLPDD 1029
Query: 723 --SQGCSRETSP--NRIGLARSSRIPRPSMSQGCSRDT----SRESSRDTSPA 767
+ G ++P + G ++ P S S G ++ S SS DT+P+
Sbjct: 1030 TITSGLVEASTPTHSSTGSLHTTLTPASSTSAGLQEESTTFQSWPSSSDTTPS 1082
Score = 34.7 bits (78), Expect = 0.73
Identities = 74/311 (23%), Positives = 111/311 (35%), Gaps = 31/311 (9%)
Query: 548 SLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDI 602
+LP S S++S R P T+S S ST S S GS +
Sbjct: 109 ALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSHSRPGSTHTTA--F 166
Query: 603 DVNAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVASTPDNR 660
+ S+ S++S ++P + L PGS +SLG T S +T PDN
Sbjct: 167 PGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSRPGSTETTLLPDNT 226
Query: 661 GRS----RAKVVSQSQRS--RSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSS 714
S + V S RS + +PAG+ +R + + +R P T +S
Sbjct: 227 TASGLLEASMPVHSSTRSPHTTLSPAGSTTRQGESTTF----HSWPSSKDTRPAPPTTTS 282
Query: 715 EKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLD 774
S G SP+ I S R + S T+ SS ++ FP D
Sbjct: 283 AFVEPSTTSHG-----SPSSIPTTHIS--ARSTTSGLVEESTTYHSSPGSTQTMHFPESD 335
Query: 775 -RFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASS 833
G G+ S + S + A V ++P P + +S +S
Sbjct: 336 TTSGRGEESTTSHSSTTHTISSAPSTTSALV----EEPTSYHSSPGSTATTHFPDSSTTS 391
Query: 834 VCSERSYGSRN 844
SE S S +
Sbjct: 392 GRSEESTASHS 402
Score = 33.1 bits (74), Expect = 2.1
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P S +S S++S S S T + +S ST S + STT + ++I ++
Sbjct: 664 PASSTTSGHSEKSTIFHSSPDASGT-TPSSAHSTTSGRGESTTSRISPGSTEITTLPGST 722
Query: 610 AKSKVSSSSGT---TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAK 666
+S +S T +P S L P S SLG +S+ S + ST +
Sbjct: 723 TTPGLSEASTTFYSSPRSPTTTLSPASMTSLG---VGEESTTSRSQPGSTHSTVSPASTT 779
Query: 667 VVSQSQRSRSANPAGAGSRSSS 688
S+ S + + GS ++
Sbjct: 780 TPGLSEESTTVYSSSRGSTETT 801
Score = 32.7 bits (73), Expect = 2.8
Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 10/224 (4%)
Query: 553 DRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDI--DVNAAASA 610
D +++S + P+ + +T S A + + + STT S D SA
Sbjct: 1279 DNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSA 1338
Query: 611 KSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQ 670
++S++S +P S+ S +LGR S A+TP + + +V +
Sbjct: 1339 FVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEE 1398
Query: 671 SQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRET 730
S S+ + G T SS ++ S + + S +
Sbjct: 1399 STAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSALV-EEPTSYHS 1457
Query: 731 SPNRIGLARSSRIPRPSMSQGCSRD-TSRESSRDTSPARGFPPL 773
SP I ++ P S + G S + T+ SS DT+ G PL
Sbjct: 1458 SPGSIA---TTHFPESSTTSGRSEESTASHSSPDTN---GITPL 1495
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 49.3 bits (116), Expect = 3e-05
Identities = 60/233 (25%), Positives = 90/233 (38%), Gaps = 26/233 (11%)
Query: 527 TLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVST 586
++ SS K+ SH +S S S +SS S S ++ S+ S GS+ S S S+
Sbjct: 1088 SVSSSGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLSSSMYSSQGSSGSSQSKNSS 1147
Query: 587 KSVSTTGS-------LQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGR 639
+S GS L S + S ++ S S + + PPG
Sbjct: 1148 QSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSKPNISPSHSRPPGG------ 1201
Query: 640 IRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGG 699
S A+ + P S+AK S S + + SSS G SG G
Sbjct: 1202 ------SDKLASPMKPVPGTPPSSKAK----SPISSGSGGSHMSGTSSSSGMKSSSGLGS 1251
Query: 700 LTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARS---SRIPRPSMS 749
S + PP + S S S G S +S N+ G ++ SR +PS++
Sbjct: 1252 SGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLT 1304
Score = 46.2 bits (108), Expect = 2e-04
Identities = 62/238 (26%), Positives = 91/238 (38%), Gaps = 20/238 (8%)
Query: 538 SHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQR 597
S +S S+ S S SS S + S K + S S +S +S+ S+ GS
Sbjct: 1081 SQYTSSGSVSSSGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLSSSMYSSQGS--- 1137
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTP 657
+ S++SK SS SG P SS S S + S N + +
Sbjct: 1138 ---------SGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSK 1188
Query: 658 DNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKL-LGSGYGG--LTGGSSRGPPVTPSS 714
N S ++ S + S G+ SS K + SG GG ++G SS +
Sbjct: 1189 PNISPSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSS-----SSGM 1243
Query: 715 EKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPP 772
+ S + S S++T P+ SS S S S SS+ SP+R P
Sbjct: 1244 KSSSGLGSSGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKP 1301
Score = 44.3 bits (103), Expect = 0.001
Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 18/207 (8%)
Query: 575 GSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSY 634
G +S + S+ SVS++GS +++AS K+ SS + SS++ L Y
Sbjct: 1075 GKPSSHSQYTSSGSVSSSGSKSHHSHSSSSSSSASTSGKMKSSK--SEGSSSSKLSSSMY 1132
Query: 635 ASLGRIRT--RRQSSGSATNVASTPDNR-----GRSRAKVVSQSQRSRSANPAGAGSRSS 687
+S G + + SS S S+P + G S K+ Q + S NP+ + S
Sbjct: 1133 SSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSKPNIS 1192
Query: 688 SPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRET---------SPNRIGLA 738
G L P PSS+ +S I G S + S + +G +
Sbjct: 1193 PSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLGSS 1252
Query: 739 RSSRIPRPSMSQGCSRDTSRESSRDTS 765
S P S C+ +S SS +S
Sbjct: 1253 GSLSQKTPPSSNSCTASSSSFSSSGSS 1279
Score = 32.7 bits (73), Expect = 2.8
Identities = 36/177 (20%), Positives = 59/177 (33%), Gaps = 27/177 (15%)
Query: 699 GLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIP---------RPSMS 749
G + + GP + KRS+ P + G S++ P R + P P S
Sbjct: 977 GTSNSTLSGPGLDSKPGKRSRTPSNDGKSKDKPPKRKKADTEGKSPSHSSSNRPFTPPTS 1036
Query: 750 QGCSRDTSRESSRDTSPARGFPPLDRFGL---------GQP---------GRIPGSVNAM 791
G S+ T P PP+ + + G+P G + S +
Sbjct: 1037 TGGSKSPGSAGRSQTPPGVATPPIPKITIQIPKGTVMVGKPSSHSQYTSSGSVSSSGSKS 1096
Query: 792 RVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIP 848
+S+ +A K + S +S SS S+ S++GG P
Sbjct: 1097 HHSHSSSSSSSASTSGKMKSSKSEGSSSSKLSSSMYSSQGSSGSSQSKNSSQSGGKP 1153
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 48.9 bits (115), Expect = 4e-05
Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 9/224 (4%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
+SDS S SD S SS +S + S+ S + S+ S +S S S S+ S SD
Sbjct: 692 SSDSSNSSESSDSSDSSDSDSSD---SSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSD 748
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRG 661
++ +S S S+SS ++ S ++ S +S + S ++N + + ++
Sbjct: 749 SSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSD 808
Query: 662 RSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIP 721
S + S S S S++ + + S S S + GS S RS
Sbjct: 809 SSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDS------DSSNRSDSS 862
Query: 722 RSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTS 765
S S + + + S S + S D+S S D+S
Sbjct: 863 NSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSS 906
Score = 46.2 bits (108), Expect = 2e-04
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 6/237 (2%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
+SS K+ S SDS S +SD S S+S +S + S+ S S +S +S S S
Sbjct: 618 DSSDSKS-DSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSD-SSNSSNSSDSSDSSDSS 675
Query: 589 VSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSG 648
S++ S + SD ++ +S S+ S SS ++ S+ + + S + S
Sbjct: 676 DSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSS 735
Query: 649 SATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGP 708
++N + + D+ S + S S S +++ + S SS S + SS
Sbjct: 736 DSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSS 795
Query: 709 PVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTS 765
+ SS+ + S S + + SS S S S + S D+S
Sbjct: 796 DSSNSSDSSNSSDSSDSSDSSDSDS----SNSSDSSNSSDSSDSSNSSDSSDSSDSS 848
Score = 42.0 bits (97), Expect = 0.005
Identities = 53/238 (22%), Positives = 91/238 (38%), Gaps = 1/238 (0%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSP-TGSTTSRASTVSTK 587
ESS +SDS S + SS S S + S+ S + S+ S S+ S+
Sbjct: 887 ESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSD 946
Query: 588 SVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSS 647
S ++ S S S N++ S+ S S SS ++ S ++ S +S + S
Sbjct: 947 SSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDS 1006
Query: 648 GSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRG 707
+++ + + ++ S + S S S ++ + S SS S + SS
Sbjct: 1007 SDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDS 1066
Query: 708 PPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTS 765
+ SS+ S+ S N + SS S S S + S ++S
Sbjct: 1067 SDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSS 1124
Score = 40.8 bits (94), Expect = 0.010
Identities = 40/159 (25%), Positives = 67/159 (42%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
ESS + +SDS S SD S SS + ++ S S +S +S S S
Sbjct: 1083 ESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSS 1142
Query: 589 VSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSG 648
S+ S SD ++ +S S S SS ++ S+++ S +S + S
Sbjct: 1143 DSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSS 1202
Query: 649 SATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSS 687
+++ + + D+ S + S S S +N + S SS
Sbjct: 1203 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSS 1241
Score = 37.7 bits (86), Expect = 0.086
Identities = 53/227 (23%), Positives = 85/227 (37%), Gaps = 3/227 (1%)
Query: 542 NSDSIVSLPQSDRSSS--SSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGS-LQRS 598
+SDS S SSS S +S + S S S +S +S S S S+ S S
Sbjct: 563 SSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDS 622
Query: 599 RSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPD 658
+SD + + S+ S S S + S ++ S +S + S +++ +S+ D
Sbjct: 623 KSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSD 682
Query: 659 NRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRS 718
+ S + S S S ++ + S S S S SS + SS
Sbjct: 683 SSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSD 742
Query: 719 KIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTS 765
S + S + + SS S S S ++ S D+S
Sbjct: 743 SSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSS 789
Score = 35.0 bits (79), Expect = 0.56
Identities = 41/162 (25%), Positives = 63/162 (38%), Gaps = 19/162 (11%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
ESS +SDS S SD S SS+ + + S S +S +S S S
Sbjct: 1149 ESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 1208
Query: 589 VSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSG 648
S+ S SD ++ +S ++ S SS ++ S ++ SS
Sbjct: 1209 DSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSS--------------NSSDSSD 1254
Query: 649 SATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPG 690
S+ + ST D+ S +S + N G+ S S S G
Sbjct: 1255 SSDSSDSTSDSNDES-----DSQSKSGNGNNNGSDSDSDSEG 1291
>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
Length = 437
Score = 48.9 bits (115), Expect = 4e-05
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 14/229 (6%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
++ ++ + P + S +S P + K SP+ S+ + T + S G+ +++ D
Sbjct: 36 SAGNVSTHPSLSQRPGGSTKSHPEPQTPKDSPSKSSAEAQTPEDTPNKS--GAEAKTQKD 93
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTP-DNR 660
+ A AK++ S+S + S A + S ++T + S+G + A TP D+
Sbjct: 94 SSNKSGAEAKTQKGSTSKSG--SEAQTTKDSTSKSHPELQTPKDSTGKSGAEAQTPEDSP 151
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
RS A+ +Q S S + + A + P K G G S G + +
Sbjct: 152 NRSGAEAKTQKD-SPSKSGSEAQTTKDVPNKSGADGQTPKDGSSKSG----AEDQTPKDV 206
Query: 721 PRSQGCSRET---SPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSP 766
P G ++T N+ G I PS S G TS++S P
Sbjct: 207 PNKSGAEKQTPKDGSNKSGAEEQGPIDGPSKS-GAEEQTSKDSPNKVVP 254
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 47.0 bits (110), Expect = 1e-04
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 13/224 (5%)
Query: 556 SSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS-DIDVNAAASAKSKV 614
S S S +R +++S + S +S++S ++S S +GS RS+S + + S K K
Sbjct: 188 SRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKS 247
Query: 615 SSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRS 674
S S S + + S + + Q++ + S +R +S++K S+SQ
Sbjct: 248 RSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQER 307
Query: 675 R-SANPAGAGSRSSSPGKLL---GSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRET 730
R G+ SR S K L S G SR + S +KR RS+ SR
Sbjct: 308 RVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSR 367
Query: 731 SPNRIGLARS-SRIPRPSMSQGCSR-----DTSRESSRDTSPAR 768
S +R RS R + G S+ DT R SR SP+R
Sbjct: 368 SRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSR--SPSR 409
Score = 44.7 bits (104), Expect = 7e-04
Identities = 55/222 (24%), Positives = 83/222 (37%), Gaps = 31/222 (13%)
Query: 553 DRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKS 612
D+ S + S +R S RS + S SR S + S ++ S RSRS + + ++S
Sbjct: 175 DKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRS 234
Query: 613 KVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQ 672
+ S S R + + S S S + G+SR+K Q++
Sbjct: 235 RSQSRS--------------------RSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAE 274
Query: 673 RSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQG------C 726
N +S SP S + + SR EKR + R +
Sbjct: 275 EKIQNNDNVGKPKSRSP-----SRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQ 329
Query: 727 SRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 768
SR S ++ G SR S + R SRE SR S +R
Sbjct: 330 SRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSR 371
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 47.0 bits (110), Expect = 1e-04
Identities = 72/289 (24%), Positives = 109/289 (37%), Gaps = 41/289 (14%)
Query: 515 SHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT 574
SH RE Y T++S +++ H K SDS + D S S + + LS RS T
Sbjct: 200 SHRKRETPKSYKTVDSPKRRSRSPHRKWSDS----SKQDDSPSGASYGQDYDLSPSRSHT 255
Query: 575 GS----------TTSRASTVST--KSVSTTGSLQRSRSDI---DVNAAASAKSKVSSSSG 619
S +TSR +VS K S S RS S + + ++ + SS
Sbjct: 256 SSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRRRSSSYER 315
Query: 620 TTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANP 679
+ +S + P G S ++R S S + +R RS A S S+
Sbjct: 316 SGSYSGRSPSPYGRRRSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRS 375
Query: 680 AGAGSRSS-SPGKL-LGSGYGG-----------------LTGGSSRGPPV-TPSSEKRSK 719
+ SS SP +L L S G + G S+G PV P E S
Sbjct: 376 SSRSRHSSISPVRLPLNSSLGAELSRKKKERAAAAAAAKMDGKESKGSPVFLPRKENSSV 435
Query: 720 IPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 768
+ G + P + L +S+ P + +T ++S DT +
Sbjct: 436 EAKDSGLESKKLPRSVKLEKSA--PDTELVNVTHLNTEVKNSSDTGKVK 482
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 47.0 bits (110), Expect = 1e-04
Identities = 72/289 (24%), Positives = 109/289 (37%), Gaps = 41/289 (14%)
Query: 515 SHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT 574
SH RE Y T++S +++ H K SDS + D S S + + LS RS T
Sbjct: 200 SHRKRETPKSYKTVDSPKRRSRSPHRKWSDS----SKQDDSPSGASYGQDYDLSPSRSHT 255
Query: 575 GS----------TTSRASTVST--KSVSTTGSLQRSRSDI---DVNAAASAKSKVSSSSG 619
S +TSR +VS K S S RS S + + ++ + SS
Sbjct: 256 SSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRRRSSSYER 315
Query: 620 TTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANP 679
+ +S + P G S ++R S S + +R RS A S S+
Sbjct: 316 SGSYSGRSPSPYGRRRSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRS 375
Query: 680 AGAGSRSS-SPGKL-LGSGYGG-----------------LTGGSSRGPPV-TPSSEKRSK 719
+ SS SP +L L S G + G S+G PV P E S
Sbjct: 376 SSRSRHSSISPVRLPLNSSLGAELSRKKKERAAAAAAAKMDGKESKGSPVFLPRKENSSV 435
Query: 720 IPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 768
+ G + P + L +S+ P + +T ++S DT +
Sbjct: 436 EAKDSGLESKKLPRSVKLEKSA--PDTELVNVTHLNTEVKNSSDTGKVK 482
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 47.0 bits (110), Expect = 1e-04
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 20/144 (13%)
Query: 554 RSSSSSQESLNRPLSAKRSPTGSTT-----SRASTVSTKSVSTTGSLQRSRSDIDVNAAA 608
RS S S+ S +R S SP+ S + SR+S+ S++S S + S +RSRS + ++
Sbjct: 201 RSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSS-SSQSRSRSSSRERSRSRGSKSRSS 259
Query: 609 SAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVV 668
S + SSS +SS+++ P + R R+R +SS S +R + R +
Sbjct: 260 SRSHRGSSSPRKRSYSSSSSSPERN-----RKRSRSRSSSSG--------DRKKRRTRSR 306
Query: 669 SQSQRSRSANPAG-AGSRSSSPGK 691
S +R RS++ + +GSRSSS K
Sbjct: 307 SPERRHRSSSGSSHSGSRSSSKKK 330
Score = 37.0 bits (84), Expect = 0.15
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Query: 639 RIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYG 698
R R++ +SS S ++ S+ + RSR+ RSRS + + + SRS S + G
Sbjct: 201 RSRSKSRSSHSRSSSRSSSPSSSRSRS-------RSRSRSSSSSQSRSRSSSRERSRSRG 253
Query: 699 GLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARS---------SRIP--RPS 747
+ SSR + S KRS S R +R + S SR P R
Sbjct: 254 SKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHR 313
Query: 748 MSQGCSRDTSRESSR 762
S G S SR SS+
Sbjct: 314 SSSGSSHSGSRSSSK 328
Score = 33.1 bits (74), Expect = 2.1
Identities = 37/108 (34%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 662 RSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIP 721
RSR+K S+S SRS+ SRSSSP SS SS +RS
Sbjct: 201 RSRSK--SRSSHSRSS------SRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERS--- 249
Query: 722 RSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARG 769
RS+G S+ S +R SS R S S + +R+ SR S + G
Sbjct: 250 RSRG-SKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSG 296
Score = 31.6 bits (70), Expect = 6.2
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 11/139 (7%)
Query: 635 ASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLG 694
A L + + S +R +SR+ S SRS++P+ + SRS S +
Sbjct: 178 ADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSS--SRSSSPSSSRSRSRSRSRSSS 235
Query: 695 SGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSR 754
S + SSR + S+ RS +G S SP + + SS P + + SR
Sbjct: 236 SSQ-SRSRSSSRERSRSRGSKSRSSSRSHRGSS---SPRKRSYSSSSSSPERNRKRSRSR 291
Query: 755 -----DTSRESSRDTSPAR 768
D + +R SP R
Sbjct: 292 SSSSGDRKKRRTRSRSPER 310
>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
Length = 951
Score = 46.2 bits (108), Expect = 2e-04
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 18/184 (9%)
Query: 553 DRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKS 612
DR SS S++ K+ SR + S K S++ S RS S AK
Sbjct: 739 DRPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHS--------KAKH 790
Query: 613 KVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQS- 671
+ S+ T S + + P A R +S +A V+ +P G SR + S+S
Sbjct: 791 SLPSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSP---GASRKRTRSRSP 847
Query: 672 ------QRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQG 725
+RSRS + A S+S SP K S+ V+P + S RS+G
Sbjct: 848 HEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAAHSAHSASVSPVESRGSSQERSRG 907
Query: 726 CSRE 729
S+E
Sbjct: 908 VSQE 911
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 46.2 bits (108), Expect = 2e-04
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 28/234 (11%)
Query: 566 PLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSS 625
P +A+ SP + +S ST+S S + R+ + S S+ S S + +SS
Sbjct: 378 PSTARSSPMKGCSRSSSYASTRSSSHSSRSPNPRASPRYTQSRSTSSEKRSYSRSPSYSS 437
Query: 626 -AAALPPGSYASLGRIRTRRQSSGSATNVASTPD-------------NRGRSRAKVVSQS 671
+ P S +S R+RR S S + + D R R R + S
Sbjct: 438 KSGKRSPPSRSS----RSRRSPSYSRYSPSRERDPKYSEKDSQQRERERARRRRRSYSPM 493
Query: 672 QRSRSANPAGAGSRSSSPGKLLGSGY--------GGLTGGSSRGPPVTPSSEKRS-KIPR 722
++ R +P+ +R + + Y G L+ SS + S RS R
Sbjct: 494 RKRRRDSPSHLEARRITSARKRPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSRSR 553
Query: 723 SQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRF 776
S+ SR S R + SSR P P S+ SR SR SR S +R + D +
Sbjct: 554 SRSRSRRRSRTRTSSSSSSRSPSPG-SRSRSRSRSRSRSRSRSQSRSYSSADSY 606
Score = 35.8 bits (81), Expect = 0.33
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 26/172 (15%)
Query: 518 SREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGST 577
SRE + Y +S ++ ++ + S + R S S R SA++ P
Sbjct: 463 SRERDPKYSEKDSQQRERERARRRRRS--YSPMRKRRRDSPSHLEARRITSARKRPI--P 518
Query: 578 TSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASL 637
R S S+ S+S+T S S S S S + +S + + S
Sbjct: 519 YYRPSPSSSGSLSSTSSWYSSSS---------------SRSASRSYSRSRS------RSR 557
Query: 638 GRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQ-RSRSANPAGAGSRSSS 688
R R+R ++S S+++ + +P +R RSR++ S+S+ RS+S + + A S SS+
Sbjct: 558 SRRRSRTRTSSSSSSRSPSPGSRSRSRSRSRSRSRSRSQSRSYSSADSYSST 609
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 45.8 bits (107), Expect = 3e-04
Identities = 75/305 (24%), Positives = 109/305 (35%), Gaps = 35/305 (11%)
Query: 496 HDADSEARIE-ARKCYWGF------------HSHFSREAEHLYHTLESSYQKALQSHLKN 542
H DSE R E A + ++G SH A H H+ ESS Q + +
Sbjct: 1603 HSEDSERRSESASRNHYGSAREQSRHGSRNPRSHQEDRASH-GHSAESSRQSGTRHAETS 1661
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVS-TTGSLQRSRSD 601
S + Q SS + +R + S T S T R S S GS SD
Sbjct: 1662 SGGQAASSQEQARSSPGERHGSRHQQSADSSTDSGTGRRQDSSVVGDSGNRGSSGSQASD 1721
Query: 602 IDVNAAASAKSKVSSSSGTTPF-----------SSAAALPPGSYASLGRIRTRRQSSGSA 650
+ ++ S VS+ P S + GS+ L ++ T QS +
Sbjct: 1722 SEGHSEESDTQSVSAHGQAGPHQQSHQESTRGQSGERSGRSGSF--LYQVSTHEQSESAH 1779
Query: 651 TNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGL------TGGS 704
+ R RSR + S R SA+ G + PG G G + G
Sbjct: 1780 GRTGPSTGGRQRSRHEQARDSSR-HSASQEGQDTIRGHPGSSRGGRQGSHYEQSVDSSGH 1838
Query: 705 SRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDT 764
S +S++RS + R Q SR S +S R S S+ + +SSR +
Sbjct: 1839 SGSHHSHTTSQERSDVSRGQSGSRSVSRQTRNEKQSGDGSRHSGSRHHEASSRADSSRHS 1898
Query: 765 SPARG 769
+G
Sbjct: 1899 QVGQG 1903
Score = 35.4 bits (80), Expect = 0.43
Identities = 82/346 (23%), Positives = 123/346 (35%), Gaps = 44/346 (12%)
Query: 537 QSHLKNSD--SIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGS 594
+ H + SD S+ Q S QES + +GS + ST +S S G
Sbjct: 1075 EGHSEESDTQSVSGHGQDGPHQQSHQESARDWSGGRSGRSGSFIYQVST-HEQSESAHGR 1133
Query: 595 LQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVA 654
+ S + A+ S+ + A P G R RQ S +V
Sbjct: 1134 TRTSTGRRQGSHHEQARDSSRHSASQEGQDTIRAHP-------GSRRGGRQGSHHEQSVD 1186
Query: 655 STPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVT-PS 713
+ + G + SQ + S +G+ S S K SG G GS +
Sbjct: 1187 RS-GHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRKDKQSGDGSRHSGSRHHEAASWAD 1245
Query: 714 SEKRSKIPRSQGCSRETSPNR-IGLARSSRIPRPS-----MSQGCSRD---TSRESSRDT 764
S + S++ + Q TS ++ +++ S R S +S SR+ +SRE SRD
Sbjct: 1246 SSRHSQVGQEQSSGSRTSRHQGSSVSQDSDSERHSDDSERLSGSASRNHHGSSREQSRDG 1305
Query: 765 SPARGFPPLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEP---YGM 821
S GF DR G S ++ R T ++ A+ + R P +G
Sbjct: 1306 SRHPGFHQEDRASHGH------SADSSRQSGTHHTESSSHGQAVSSHEQARSSPGERHGS 1359
Query: 822 YSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASS 867
A+S SR+ GI H RQ H SS
Sbjct: 1360 RHQQSADS------------SRHSGIGH--RQASSAVRDSGHRGSS 1391
Score = 33.9 bits (76), Expect = 1.2
Identities = 73/326 (22%), Positives = 117/326 (35%), Gaps = 44/326 (13%)
Query: 489 ETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLES------SYQKALQSHLKN 542
E ++G++D ++ R+ + G + + + Y T +S Y+++ S K+
Sbjct: 208 EDNEEGVYDYENTGRMTQKWIQSGHIATYYTIQDEAYDTTDSLLEENKIYERSRSSDGKS 267
Query: 543 SDSI----------VSLPQS------------DRSSSS-SQESLNRPLSAKRSPTGSTTS 579
S + V L +S DR S S++S SA R+ GS
Sbjct: 268 SSQVNRSRHENTSQVPLQESRTRKRRGSRVSQDRDSEGHSEDSERHSGSASRNHHGSAWE 327
Query: 580 RASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFS-SAAALPPGSYASLG 638
++ S S D + + + +SS G T S A PG G
Sbjct: 328 QSRDGSRHPRSHDEDRASHGHSADSSRQSGTRHAETSSRGQTASSHEQARSSPGERHGSG 387
Query: 639 RIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAG---AGSRSSSPGKLLGS 695
++ S SAT RG++ + V + R S + A S +S + G
Sbjct: 388 HQQSADSSRHSAT-------GRGQASSAVSDRGHRGSSGSQASDSEGHSENSDTQSVSGH 440
Query: 696 GYGGLTGGSSRGPPVTPSSEK--RSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCS 753
G GL S + S E+ RS Q + E + G +S R +
Sbjct: 441 GKAGLRQQSHQESTRGRSGERSGRSGSSLYQVSTHEQPDSAHGRTGTSTGGRQGSHHEQA 500
Query: 754 RDTSRESS--RDTSPARGFPPLDRFG 777
RD+SR S+ RG P R G
Sbjct: 501 RDSSRHSASQEGQDTIRGHPGSSRGG 526
Score = 32.0 bits (71), Expect = 4.7
Identities = 86/359 (23%), Positives = 132/359 (36%), Gaps = 75/359 (20%)
Query: 514 HSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSP 573
HS S +HT SS+ +A+ SH + S +R S Q+S
Sbjct: 1321 HSADSSRQSGTHHTESSSHGQAVSSHEQARSS-----PGERHGSRHQQS----------- 1364
Query: 574 TGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS 633
+ +SR S + G Q S + D S+ S+V++S G + S S
Sbjct: 1365 --ADSSRHSGI--------GHRQASSAVRDSGHRGSSGSQVTNSEGHSEDSDTQ-----S 1409
Query: 634 YASLGRIRTRRQS-SGSATNVASTPDNRGRSRAKVVSQSQRSRSAN----PAGAG----- 683
++ G+ +QS SA + R RS VS ++S S + P+ G
Sbjct: 1410 VSAHGQAGPHQQSHKESARGQSGESSGRSRSFLYQVSSHEQSESTHGQTAPSTGGRQGSR 1469
Query: 684 ---SRSSSPGKLLGSGYGGLTG--GSSRGPPVTPSSEKRSKIPRSQGC----SRETSPNR 734
+R+SS G + G GSSRG S + RS S T R
Sbjct: 1470 HEQARNSSRHSASQDGQDTIRGHPGSSRGG--RQGSYHEQSVDRSGHSGYHHSHTTPQGR 1527
Query: 735 IGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFG------LGQPGRIPGSV 788
+ PR + Q + + S + SR S +R P R G +GQ G GS
Sbjct: 1528 SDASHGQSGPRSASRQTRNEEQSGDGSRH-SGSRHHEPSTRAGSSRHSQVGQ-GESAGSK 1585
Query: 789 NAMR---VLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRN 844
+ R +S D E D+ ++ S+ + + S + +GSRN
Sbjct: 1586 TSRRQGSSVSQDRDSEGHSEDSERR------------SESASRNHYGSAREQSRHGSRN 1632
Score = 31.2 bits (69), Expect = 8.1
Identities = 62/287 (21%), Positives = 101/287 (35%), Gaps = 21/287 (7%)
Query: 496 HDADSEARIEARKCYWGFHSHFSREA------EHLYHTLESSYQKALQSHLKNSDSIVSL 549
H DS+ + + G H +E+ E H+ YQ + ++S
Sbjct: 2698 HSEDSDTQSVSAHGQAGSHQQSHQESARGRSGETSGHSGSFLYQVSTHEQSESSHGWTG- 2756
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P + S E S G T R S++ G Q + V+++
Sbjct: 2757 PSTRGRQGSRHEQAQDSSRHSASQDGQDTIRGHPGSSR-----GGRQGYHHEHSVDSSGH 2811
Query: 610 AKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQS------SGSATNVASTPDNRGRS 663
+ S S ++ S A+ GS ++ R QS SGS + AST + R
Sbjct: 2812 SGSHHSHTTSQGR-SDASRGQSGSRSASRTTRNEEQSGDGSRHSGSRHHEASTHADISRH 2870
Query: 664 RAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKR--SKIP 721
V QS+ SR + G+ S + +G +SR + + R S+ P
Sbjct: 2871 SQAVQGQSEGSRRSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHHGSAQEQLRDGSRHP 2930
Query: 722 RSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 768
RS R + +R S S G +S E +R ++ R
Sbjct: 2931 RSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQARSSAGER 2977
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 45.8 bits (107), Expect = 3e-04
Identities = 68/281 (24%), Positives = 109/281 (38%), Gaps = 34/281 (12%)
Query: 545 SIVSLPQSDRSSSSSQESLNRPLS---AKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
S SL + D ++S S+ ++ ++ SPTG ++ + T + S TGS
Sbjct: 318 SRTSLTKMDSTASISRTPPRASITRTPSRASPTGKPSTASPTGTPSRASPTGS------- 370
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRG 661
A+ + S +S +GT P +S P S ASL R R +G + + T +
Sbjct: 371 -PSTASLTGLSSTASPTGTPPRASPTGTP--STASLTRKPPRASPTGMLSRTSITKMDST 427
Query: 662 RSRAKV---VSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRS 718
S + S + A+P G SR+S G S+ P +PS+ +
Sbjct: 428 ASPTRTPPRASPTGTPPRASPTGTPSRASPTGT-----------QSTASPTGSPSTASPT 476
Query: 719 KIPRSQGCSRETSPNRIGLARS-SRIPRPSMSQGCS-RDTSRESSRDTSPARGFP---PL 773
P + S SP+R L R+ SR M S T +S +P+ P P
Sbjct: 477 GSPST--ASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPSTASPTGSPS 534
Query: 774 DRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRR 814
+G P R + R T T A++ + + R
Sbjct: 535 TALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRASLTR 575
Score = 39.7 bits (91), Expect = 0.023
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 30/204 (14%)
Query: 572 SPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPP 631
SPTGS ++ + T S + S TGS R+ + A+ K + ++S TP ++ P
Sbjct: 465 SPTGSPSTASPTGSPSTASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTP 524
Query: 632 GSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGK 691
+ + G T + GS + A T R SRA + R+ P+ A S + +P
Sbjct: 525 STASPTGSPST-ALAMGSPSRAALT---RTPSRASLTRTPSRASLTTPSRA-SLTRTPST 579
Query: 692 LLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQG 751
+L +R PP + G TSP G+ S+ + + +
Sbjct: 580 VL----------LTRMPPSASPT----------GMPSRTSPT--GMPSSALLTKMDSTAS 617
Query: 752 CSRDTSRESSRDTSP---ARGFPP 772
+R R S +T P G PP
Sbjct: 618 ITRTPPRASPTETPPRASPTGTPP 641
Score = 36.6 bits (83), Expect = 0.19
Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 23/147 (15%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTG-----STTSRASTVSTKSVSTTGSLQRSRSDIDV 604
P++ + + S SL R + SPTG S T ST S + +T S+ R+ S
Sbjct: 162 PRASLTMTPSTASLTRT-PPRASPTGMPSRTSPTGMPSTASLTKMDSTASITRTLSR--- 217
Query: 605 NAAASAKSKVSSSSGTTPFSSAAALPPGSYASL---GRIRTRRQSSGSATNVAS-TPDNR 660
+S +GT P +S PP + S+ + R S T + S T +
Sbjct: 218 ----------ASPTGTPPRASPTGSPPRASLSMMPSTALLIRTPPRASPTGMLSRTSLTK 267
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSS 687
S A + R +A+P G SR+S
Sbjct: 268 MDSTASITRTPSRPSTASPTGTPSRAS 294
Score = 32.3 bits (72), Expect = 3.6
Identities = 53/215 (24%), Positives = 75/215 (34%), Gaps = 26/215 (12%)
Query: 1055 TPEFTMLLGALPKTFQDGA-TKLLHNHLKNSSNTSVGSPSNTIGRTPSRH---------- 1103
TP L+ LP+ G ++ + ++++ S P +I RTPSR
Sbjct: 298 TPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASITRTPSRASPTGKPSTAS 357
Query: 1104 ---TSSRTSPLTSPTNCSHGGLSPSRLWGWSADGLAKHPPPFSQPNSIPTAPSHKALRRS 1160
T SR SP SP+ S GLS + S G PP + P P+ S
Sbjct: 358 PTGTPSRASPTGSPSTASLTGLSSTA----SPTG----TPPRASPTGTPSTASLTRKPPR 409
Query: 1161 YSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGG 1220
SP+ + T + S R A + P + S G
Sbjct: 410 ASPTGMLSRTSITKMDSTASPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTG- 468
Query: 1221 AASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRA 1255
SP+T GS T ++ SL T P RA
Sbjct: 469 --SPSTASPTGSPSTASPTGSPSRASLTRT-PSRA 500
>gi|51173722 bromodomain and PHD finger-containing protein 1 isoform
2 [Homo sapiens]
Length = 1214
Score = 45.8 bits (107), Expect = 3e-04
Identities = 63/264 (23%), Positives = 93/264 (35%), Gaps = 47/264 (17%)
Query: 514 HSHFSREAEHLYHTLESSYQKAL-----QSHLKNSDSIVSLPQSDRSSSSSQESLNRPLS 568
HS EA H HT +++ ++ L Q HL + + L + ++S++S+ R
Sbjct: 751 HSLAGDEATH--HTEDAAEEERLVLLENQKHLPVEEQLKLLLERLDEVNASKQSVGRSRR 808
Query: 569 AKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAA 628
AK T R + G + S S TP +A
Sbjct: 809 AKMIKKEMTALRRKLAHQRETGRDGPERHGPS---------------SRGSLTPHPAACD 853
Query: 629 LPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSS 688
+ ++ ++ S G N++STP + R V+ + ++A P R
Sbjct: 854 KDGQTDSAAEESSSQETSKGLGPNMSSTPAHEVGRRTSVLFSKKNPKTAGPP---KRPGR 910
Query: 689 PGKLLGSGYGGLTGGSSRGPPVTP--SSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRP 746
P K S GGS GPP P SS ++ K RS PRP
Sbjct: 911 PPKNRESQMTPSHGGSPVGPPQLPIMSSLRQRKRGRS--------------------PRP 950
Query: 747 SMSQGCSRDTSRESSRDTSPARGF 770
S S D S E PA GF
Sbjct: 951 SSSSDSDSDKSTEDPPMDLPANGF 974
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,400,379
Number of Sequences: 37866
Number of extensions: 2560563
Number of successful extensions: 12548
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 440
Number of HSP's that attempted gapping in prelim test: 10123
Number of HSP's gapped (non-prelim): 2224
length of query: 1538
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1423
effective length of database: 13,892,928
effective search space: 19769636544
effective search space used: 19769636544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.