CLASP1 13176

Name: CLASP1	Sequence: fasta or formatted (1471aa)		NCBI GI: 214010175
Description: CLIP-associating protein 1 isoform 3		Referenced in: Dynein and Dynactin
Other entries for this name: alt prot [1479aa] CLIP-associating protein 1 isoform 2 alt prot [1538aa] CLIP-associating protein 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 107 3 C cysteine 1.2 17 1 D aspartate 6.3 93 3 E glutamate 5.4 80 2 F phenylalanine 2.8 41 2 G glycine 5.7 84 2 H histidine 2.4 35 1 I isoleucine 5.2 76 3 K lysine 6.0 88 3 L leucine 10.8 159 5 M methionine 1.6 23 1 N asparagine 4.0 59 1 P proline 4.1 60 2 Q glutamine 3.9 58 2 R arginine 7.1 104 3 S serine 12.2 179 5 T threonine 5.8 85 2 V valine 5.8 86 2 W tryptophan 0.6 9 1 Y tyrosine 1.9 28 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CLIP-associating protein 1 isoform 3 CLASP1 0.998 CLIP-associating protein 1 isoform 2 CLASP1 0.979 CLIP-associating protein 1 isoform 1 CLASP2 0.668 CLIP-associating protein 2 FAM179B 0.013 hypothetical protein LOC23116 MUC21 0.011 mucin 21 CKAP5 0.010 colonic and hepatic tumor over-expressed protein iso... CKAP5 0.010 colonic and hepatic tumor over-expressed protein iso... SRRM2 0.010 splicing coactivator subunit SRm300 TRIP12 0.009 thyroid hormone receptor interactor 12 LOC100130716 0.008 PREDICTED: similar to Mucin-12 FLJ37078 0.008 hypothetical protein LOC222183 CRKRS 0.008 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.008 Cdc2-related kinase, arginine/serine-rich isoform 1... SCAF1 0.008 SR-related CTD-associated factor 1 ZRANB2 0.008 zinc finger protein 265 isoform 1 LOC100170229 0.007 hypothetical protein LOC100170229 DSPP 0.007 dentin sialophosphoprotein preproprotein MED1 0.007 mediator complex subunit 1 SFRS8 0.007 splicing factor, arginine/serine-rich 8 MUC5AC 0.007 mucin 5AC MUC5B 0.007 mucin 5, subtype B, tracheobronchial MUC12 0.007 PREDICTED: mucin 12 MUC12 0.007 PREDICTED: mucin 12, cell surface associated MUC17 0.007 mucin 17 TGOLN2 0.007 trans-golgi network protein 2 ZRANB2 0.006 zinc finger protein 265 isoform 2 SFRS16 0.006 splicing factor, arginine/serine-rich 16 SFRS4 0.006 splicing factor, arginine/serine-rich 4 UBN2 0.006 ubinuclein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.