CLASP1 25636

Name: CLASP1	Sequence: fasta or formatted (1538aa)		NCBI GI: 31563537
Description: CLIP-associating protein 1 isoform 1		Referenced in: Dynein and Dynactin
Other entries for this name: alt prot [1479aa] CLIP-associating protein 1 isoform 2 alt prot [1471aa] CLIP-associating protein 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 113 3 C cysteine 1.2 18 1 D aspartate 6.2 95 3 E glutamate 5.3 81 2 F phenylalanine 2.8 43 2 G glycine 5.7 87 2 H histidine 2.4 37 1 I isoleucine 5.1 78 3 K lysine 5.8 89 2 L leucine 10.5 161 5 M methionine 1.6 24 1 N asparagine 3.9 60 1 P proline 4.7 72 3 Q glutamine 3.9 60 2 R arginine 7.3 113 3 S serine 12.5 193 5 T threonine 5.7 88 2 V valine 5.6 86 2 W tryptophan 0.7 11 1 Y tyrosine 1.9 29 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CLIP-associating protein 1 isoform 1 CLASP1 0.925 CLIP-associating protein 1 isoform 3 CLASP1 0.922 CLIP-associating protein 1 isoform 2 CLASP2 0.656 CLIP-associating protein 2 MUC21 0.013 mucin 21 FAM179B 0.012 hypothetical protein LOC23116 SRRM2 0.011 splicing coactivator subunit SRm300 FLJ37078 0.010 hypothetical protein LOC222183 CKAP5 0.010 colonic and hepatic tumor over-expressed protein iso... CKAP5 0.010 colonic and hepatic tumor over-expressed protein iso... LOC100130716 0.010 PREDICTED: similar to Mucin-12 LOC100170229 0.009 hypothetical protein LOC100170229 ANKRD17 0.009 ankyrin repeat domain protein 17 isoform a ANKRD17 0.009 ankyrin repeat domain protein 17 isoform b SCAF1 0.009 SR-related CTD-associated factor 1 SFRS16 0.009 splicing factor, arginine/serine-rich 16 MUC12 0.008 PREDICTED: mucin 12 MUC12 0.008 PREDICTED: mucin 12, cell surface associated MED1 0.008 mediator complex subunit 1 DSPP 0.008 dentin sialophosphoprotein preproprotein TGOLN2 0.008 trans-golgi network protein 2 SFRS4 0.007 splicing factor, arginine/serine-rich 4 CRKRS 0.007 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.007 Cdc2-related kinase, arginine/serine-rich isoform 1... ZRANB2 0.007 zinc finger protein 265 isoform 1 SFRS8 0.007 splicing factor, arginine/serine-rich 8 KIAA1853 0.007 KIAA1853 protein FLG 0.007 filaggrin LOC100133756 0.007 PREDICTED: hypothetical protein, partial BRPF1 0.007 bromodomain and PHD finger-containing protein 1 isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.