FAM179B 37381

Name: FAM179B	Sequence: fasta or formatted (1720aa)		NCBI GI: 93102424
Description: hypothetical protein LOC23116		Referenced in: Dynein and Dynactin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 111 3 C cysteine 1.4 24 1 D aspartate 4.9 84 2 E glutamate 6.2 107 3 F phenylalanine 3.2 55 2 G glycine 6.1 105 3 H histidine 2.2 38 1 I isoleucine 4.0 69 2 K lysine 6.6 114 3 L leucine 12.0 207 4 M methionine 1.9 33 2 N asparagine 4.5 77 2 P proline 5.5 94 2 Q glutamine 4.8 82 2 R arginine 5.5 94 2 S serine 11.4 196 3 T threonine 5.3 91 3 V valine 5.6 97 4 W tryptophan 0.5 8 1 Y tyrosine 2.0 34 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC23116 FAM179A 0.092 hypothetical protein LOC165186 CLASP1 0.011 CLIP-associating protein 1 isoform 3 CLASP1 0.011 CLIP-associating protein 1 isoform 2 CLASP1 0.011 CLIP-associating protein 1 isoform 1 CLASP2 0.011 CLIP-associating protein 2 MUC16 0.007 mucin 16 MUC12 0.006 PREDICTED: mucin 12 MLLT1 0.006 myeloid/lymphoid or mixed-lineage leukemia (trithora... ZRANB2 0.006 zinc finger protein 265 isoform 1 ZRANB2 0.006 zinc finger protein 265 isoform 2 DSPP 0.005 dentin sialophosphoprotein preproprotein PPP1R12A 0.005 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.005 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.005 protein phosphatase 1, regulatory (inhibitor) subunit... RSPH3 0.005 radial spoke 3 homolog MLLT3 0.005 myeloid/lymphoid or mixed-lineage leukemia (trithor... C10orf118 0.005 CTCL tumor antigen L14-2 MADD 0.005 MAP-kinase activating death domain-containing prote... MADD 0.005 MAP-kinase activating death domain-containing prote... MADD 0.005 MAP-kinase activating death domain-containing prote... MADD 0.005 MAP-kinase activating death domain-containing prote... LOC100130716 0.005 PREDICTED: similar to mucin 11 MUC12 0.004 PREDICTED: mucin 12 MADD 0.004 MAP-kinase activating death domain-containing prote... MADD 0.004 MAP-kinase activating death domain-containing prote... ABI3BP 0.004 ABI gene family, member 3 (NESH) binding protein [Ho... DUSP27 0.004 dual specificity phosphatase 27 MUC21 0.004 mucin 21 LAD1 0.004 ladinin 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.