Guide to the Human Genome
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Name: ZRANB2 Sequence: fasta or formatted (330aa) NCBI GI: 42741684
Description:

zinc finger protein 265 isoform 1

Referenced in:

Capping and Splicing

Other entries for this name:
alt prot [320aa] zinc finger protein 265 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         11           1
 C cysteine            2.4          8           1
 D aspartate           5.8         19           2
 E glutamate          10.0         33           3
 F phenylalanine       1.5          5           1
 G glycine             6.4         21           3
 H histidine           1.2          4           1
 I isoleucine          1.2          4           1
 K lysine             10.0         33           4
 L leucine             2.4          8           1
 M methionine          1.2          4           2
 N asparagine          4.5         15           1
 P proline             2.1          7           1
 Q glutamine           0.6          2           1
 R arginine           14.8         49           2
 S serine             24.2         80           6
 T threonine           3.0         10           2
 V valine              1.8          6           1
 W tryptophan          0.9          3           1
 Y tyrosine            2.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 265 isoform 1 
ZRANB2                0.938   zinc finger protein 265 isoform 2 
SON                   0.132   SON DNA-binding protein isoform F 
SON                   0.132   SON DNA-binding protein isoform B 
CROP                  0.114   cisplatin resistance-associated overexpressed protei...
CROP                  0.114   cisplatin resistance-associated overexpressed protei...
LOC100170229          0.106   hypothetical protein LOC100170229 
RSRC2                 0.106   arginine/serine-rich coiled-coil 2 isoform b 
SFRS12                0.105   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.105   splicing factor, arginine/serine-rich 12 isoform b [...
RSRC2                 0.105   arginine/serine-rich coiled-coil 2 isoform a 
SFRS6                 0.103   arginine/serine-rich splicing factor 6 
RSRC1                 0.101   arginine/serine-rich coiled-coil 1 
PRPF38B               0.101   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
SFRS4                 0.100   splicing factor, arginine/serine-rich 4 
PNN                   0.097   pinin, desmosome associated protein 
CHERP                 0.097   calcium homeostasis endoplasmic reticulum protein [...
SRRM2                 0.095   splicing coactivator subunit SRm300 
SFRS16                0.094   splicing factor, arginine/serine-rich 16 
NKTR                  0.094   natural killer-tumor recognition sequence 
SFRS11                0.090   splicing factor, arginine/serine-rich 11 
GPATCH8               0.090   G patch domain containing 8 
DSPP                  0.087   dentin sialophosphoprotein preproprotein 
DDX46                 0.087   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
SCAF1                 0.087   SR-related CTD-associated factor 1 
SFRS18                0.087   splicing factor, arginine/serine-rich 130 
SFRS18                0.087   splicing factor, arginine/serine-rich 130 
SFRS5                 0.086   splicing factor, arginine/serine-rich 5 
SFRS5                 0.086   splicing factor, arginine/serine-rich 5 
PPIG                  0.086   peptidylprolyl isomerase G 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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