| Name: IK | Sequence: fasta or formatted (557aa) | NCBI GI: 125988409 | |
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Description: RED protein
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.3 35 2 C cysteine 0.4 2 1 D aspartate 9.2 51 2 E glutamate 13.3 74 4 F phenylalanine 2.9 16 2 G glycine 4.3 24 2 H histidine 1.4 8 2 I isoleucine 3.2 18 2 K lysine 11.8 66 3 L leucine 5.7 32 2 M methionine 3.1 17 1 N asparagine 3.1 17 2 P proline 5.2 29 2 Q glutamine 2.7 15 2 R arginine 9.9 55 3 S serine 5.2 29 1 T threonine 5.2 29 2 V valine 2.9 16 2 W tryptophan 0.5 3 1 Y tyrosine 3.8 21 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 RED protein LOC100286959 0.054 PREDICTED: hypothetical protein XP_002343921 RBM25 0.051 RNA binding motif protein 25 ZC3H13 0.047 zinc finger CCCH-type containing 13 SFRS12 0.046 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.046 splicing factor, arginine/serine-rich 12 isoform b [... RDBP 0.045 RD RNA-binding protein LOC100131202 0.045 PREDICTED: hypothetical protein LOC100131202 0.043 PREDICTED: hypothetical protein BAT2D1 0.042 HBxAg transactivated protein 2 KIAA0182 0.042 genetic suppressor element 1 isoform 2 KIAA0182 0.042 genetic suppressor element 1 isoform 1 LOC100134067 0.041 PREDICTED: hypothetical protein LOC100288837 0.040 PREDICTED: hypothetical protein XP_002343931, parti... CBX8 0.040 chromobox homolog 8 DIDO1 0.038 death inducer-obliterator 1 isoform c ZC3H18 0.036 zinc finger CCCH-type containing 18 FIP1L1 0.035 FIP1 like 1 isoform 3 FIP1L1 0.035 FIP1 like 1 isoform 2 FIP1L1 0.035 FIP1 like 1 isoform 1 YTHDC1 0.035 splicing factor YT521-B isoform 2 YTHDC1 0.035 splicing factor YT521-B isoform 1 ACIN1 0.034 apoptotic chromatin condensation inducer 1 TCHH 0.034 trichohyalin PRPF38B 0.034 PRP38 pre-mRNA processing factor 38 (yeast) domain ... CALD1 0.032 caldesmon 1 isoform 1 DHX8 0.032 DEAH (Asp-Glu-Ala-His) box polypeptide 8 TCERG1 0.032 transcription elongation regulator 1 isoform 2 [Homo... TCERG1 0.032 transcription elongation regulator 1 isoform 1 [Homo... UPF3B 0.031 UPF3 regulator of nonsense transcripts homolog B iso...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
