LEMD3 36198

Name: LEMD3	Sequence: fasta or formatted (911aa)		NCBI GI: 7706607
Description: LEM domain containing 3		Referenced in: Additional Interaction Domain Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 78 6 C cysteine 1.6 15 1 D aspartate 5.3 48 4 E glutamate 6.9 63 4 F phenylalanine 2.5 23 2 G glycine 8.1 74 4 H histidine 2.5 23 2 I isoleucine 2.7 25 2 K lysine 4.9 45 2 L leucine 9.9 90 4 M methionine 2.1 19 2 N asparagine 4.2 38 4 P proline 6.1 56 3 Q glutamine 3.6 33 3 R arginine 7.2 66 2 S serine 9.4 86 3 T threonine 4.9 45 1 V valine 5.4 49 2 W tryptophan 1.3 12 2 Y tyrosine 2.5 23 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LEM domain containing 3 LEMD2 0.092 LEM domain containing 2 isoform 1 LEMD2 0.080 LEM domain containing 2 isoform 2 RBM39 0.042 RNA binding motif protein 39 isoform b RBM39 0.042 RNA binding motif protein 39 isoform a TMPO 0.013 thymopoietin isoform gamma TMPO 0.013 thymopoietin isoform beta TMPO 0.013 thymopoietin isoform alpha ZNF358 0.010 zinc finger protein 358 TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform c ... FLJ22184 0.009 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.009 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.009 PREDICTED: hypothetical protein LOC80164 BRSK1 0.009 BR serine/threonine kinase 1 KIAA1217 0.009 sickle tail isoform 3 KIAA1217 0.009 sickle tail isoform 2 COL11A1 0.008 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.008 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.008 alpha 1 type XI collagen isoform A preproprotein [Ho... NCOR2 0.008 nuclear receptor co-repressor 2 isoform 1 ZRANB2 0.008 zinc finger protein 265 isoform 1 ZRANB2 0.008 zinc finger protein 265 isoform 2 UHMK1 0.008 kinase interacting stathmin LEMD1 0.008 LEM domain containing 1 COL2A1 0.008 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.008 collagen, type II, alpha 1 isoform 2 precursor [Hom... HECA 0.008 headcase Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.