Guide to the Human Genome
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Name: BCLAF1 Sequence: fasta or formatted (747aa) NCBI GI: 117938254
Description:

BCL2-associated transcription factor 1 isoform 3

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [869aa] BCL2-associated transcription factor 1 isoform 2
alt prot [920aa] BCL2-associated transcription factor 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         26           2
 C cysteine            0.3          2           1
 D aspartate           5.2         39           2
 E glutamate           7.8         58           3
 F phenylalanine       2.8         21           2
 G glycine             6.3         47           4
 H histidine           3.9         29           2
 I isoleucine          2.5         19           1
 K lysine              9.0         67           2
 L leucine             2.8         21           2
 M methionine          1.2          9           1
 N asparagine          2.8         21           2
 P proline             6.3         47           2
 Q glutamine           3.3         25           1
 R arginine           13.7        102           3
 S serine             18.1        135           5
 T threonine           4.1         31           2
 V valine              2.3         17           1
 W tryptophan          0.7          5           1
 Y tyrosine            3.5         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-associated transcription factor 1 isoform 3 [H... 
BCLAF1                0.546   BCL2-associated transcription factor 1 isoform 1 [Hom...
BCLAF1                0.438   BCL2-associated transcription factor 1 isoform 2 [H...
LOC731605             0.437   PREDICTED: similar to BCL2-associated transcription...
LOC731605             0.429   PREDICTED: similar to BCL2-associated transcription...
THRAP3                0.230   thyroid hormone receptor associated protein 3 [Homo...
SRRM2                 0.056   splicing coactivator subunit SRm300 
CXorf23               0.052   hypothetical protein LOC256643 
LOC100170229          0.048   hypothetical protein LOC100170229 
SFRS4                 0.046   splicing factor, arginine/serine-rich 4 
SFRS18                0.043   splicing factor, arginine/serine-rich 130 
SFRS18                0.043   splicing factor, arginine/serine-rich 130 
SFRS16                0.043   splicing factor, arginine/serine-rich 16 
SFRS12                0.041   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.041   splicing factor, arginine/serine-rich 12 isoform b [...
SFRS11                0.038   splicing factor, arginine/serine-rich 11 
SRRM1                 0.037   serine/arginine repetitive matrix 1 
SON                   0.037   SON DNA-binding protein isoform F 
SON                   0.037   SON DNA-binding protein isoform B 
SFRS2B                0.036   splicing factor, arginine/serine-rich 2B 
DDX46                 0.036   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
PRPF38B               0.034   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
PPIG                  0.034   peptidylprolyl isomerase G 
DSPP                  0.034   dentin sialophosphoprotein preproprotein 
RSRC2                 0.032   arginine/serine-rich coiled-coil 2 isoform b 
RSRC2                 0.032   arginine/serine-rich coiled-coil 2 isoform a 
SFRS6                 0.032   arginine/serine-rich splicing factor 6 
ZRANB2                0.032   zinc finger protein 265 isoform 1 
NKTR                  0.031   natural killer-tumor recognition sequence 
C19orf29              0.031   chromosome 19 open reading frame 29 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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