SNRNP70 25024

Name: SNRNP70	Sequence: fasta or formatted (437aa)		NCBI GI: 29568103
Description: U1 small nuclear ribonucleoprotein 70 kDa		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 20 2 C cysteine 0.2 1 1 D aspartate 9.6 42 2 E glutamate 12.1 53 2 F phenylalanine 1.6 7 1 G glycine 10.1 44 5 H histidine 2.7 12 2 I isoleucine 2.1 9 1 K lysine 5.0 22 2 L leucine 4.6 20 2 M methionine 2.1 9 1 N asparagine 2.1 9 1 P proline 7.6 33 3 Q glutamine 1.4 6 2 R arginine 21.1 92 4 S serine 5.3 23 2 T threonine 2.3 10 2 V valine 2.3 10 1 W tryptophan 0.5 2 1 Y tyrosine 3.0 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 U1 small nuclear ribonucleoprotein 70 kDa SNRNP35 0.143 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... SNRNP35 0.143 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... SNRNP35 0.143 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... LOC100286959 0.104 PREDICTED: hypothetical protein XP_002343921 RBM25 0.100 RNA binding motif protein 25 ZC3H13 0.094 zinc finger CCCH-type containing 13 LOC100131202 0.089 PREDICTED: hypothetical protein SFRS12 0.088 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.088 splicing factor, arginine/serine-rich 12 isoform b [... LOC100131202 0.086 PREDICTED: hypothetical protein PRPF38B 0.086 PRP38 pre-mRNA processing factor 38 (yeast) domain ... LOC100288837 0.085 PREDICTED: hypothetical protein XP_002343931, parti... SFRS2 0.083 splicing factor, arginine/serine-rich 2 CROP 0.080 cisplatin resistance-associated overexpressed protei... CROP 0.080 cisplatin resistance-associated overexpressed protei... LOC100134067 0.080 PREDICTED: hypothetical protein FUSIP1 0.076 FUS interacting protein (serine-arginine rich) 1 iso... ACIN1 0.074 apoptotic chromatin condensation inducer 1 RBMX2 0.074 RNA binding motif protein, X-linked 2 TRA2A 0.072 transformer-2 alpha LOC100133599 0.071 PREDICTED: hypothetical protein DDX46 0.069 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 LOC100133599 0.066 PREDICTED: hypothetical protein SFRS11 0.066 splicing factor, arginine/serine-rich 11 SFRS7 0.064 splicing factor, arginine/serine-rich 7 SFRS4 0.064 splicing factor, arginine/serine-rich 4 SFRS6 0.064 arginine/serine-rich splicing factor 6 ZC3H18 0.062 zinc finger CCCH-type containing 18 SFRS2B 0.062 splicing factor, arginine/serine-rich 2B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.