LEMD2 14109

Name: LEMD2	Sequence: fasta or formatted (201aa)		NCBI GI: 221139815
Description: LEM domain containing 2 isoform 2		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [503aa] LEM domain containing 2 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 13 2 C cysteine 1.5 3 1 D aspartate 5.5 11 1 E glutamate 9.0 18 4 F phenylalanine 3.0 6 2 G glycine 3.5 7 1 H histidine 2.0 4 1 I isoleucine 5.0 10 2 K lysine 5.0 10 2 L leucine 10.0 20 2 M methionine 3.5 7 1 N asparagine 2.0 4 1 P proline 2.5 5 2 Q glutamine 3.5 7 1 R arginine 8.0 16 3 S serine 9.0 18 4 T threonine 4.0 8 2 V valine 9.5 19 2 W tryptophan 4.5 9 1 Y tyrosine 3.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LEM domain containing 2 isoform 2 LEMD2 1.000 LEM domain containing 2 isoform 1 LEMD3 0.379 LEM domain containing 3 YSK4 0.010 Yeast Sps1/Ste20-related kinase 4 isoform 1 YSK4 0.010 Yeast Sps1/Ste20-related kinase 4 isoform 2 PPFIA4 0.008 protein tyrosine phosphatase, receptor type, f polyp... SFPQ 0.008 splicing factor proline/glutamine rich (polypyrimidin... CCDC147 0.008 coiled-coil domain containing 147 C1orf125 0.008 hypothetical protein LOC126859 isoform 1 C1orf125 0.008 hypothetical protein LOC126859 isoform 2 ASPM 0.005 asp (abnormal spindle)-like, microcephaly associate... TNIK 0.005 TRAF2 and NCK interacting kinase isoform 2 TNIK 0.005 TRAF2 and NCK interacting kinase isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.