BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo sapiens] (753 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom... 1536 0.0 gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo... 929 0.0 gi|169168396 PREDICTED: hypothetical protein [Homo sapiens] 114 4e-25 gi|239748690 PREDICTED: hypothetical protein [Homo sapiens] 114 4e-25 gi|239742713 PREDICTED: hypothetical protein [Homo sapiens] 114 4e-25 gi|4557853 transcription factor SOX9 [Homo sapiens] 105 1e-22 gi|4759162 SRY-box 14 [Homo sapiens] 99 1e-20 gi|13899269 SRY-box 7 [Homo sapiens] 92 2e-18 gi|5902108 SRY-box 21 [Homo sapiens] 91 5e-18 gi|4507225 sex determining region Y [Homo sapiens] 89 1e-17 gi|5902106 SRY-box 15 [Homo sapiens] 89 2e-17 gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom... 88 3e-17 gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom... 88 3e-17 gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo... 88 3e-17 gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo... 88 3e-17 gi|28195386 sex-determining region Y-box 2 [Homo sapiens] 87 4e-17 gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens] 87 6e-17 gi|4507161 SRY-box 11 [Homo sapiens] 86 1e-16 gi|41406089 SRY-box 13 [Homo sapiens] 85 2e-16 gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens] 85 3e-16 gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens] 84 4e-16 gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens] 84 6e-16 gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens] 82 1e-15 gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens] 82 1e-15 gi|11967991 SRY-box 17 [Homo sapiens] 82 2e-15 gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo... 82 2e-15 gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo... 82 2e-15 gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo... 82 2e-15 gi|8924248 SRY-box 18 [Homo sapiens] 80 9e-15 gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens] 74 5e-13 >gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo sapiens] Length = 753 Score = 1536 bits (3977), Expect = 0.0 Identities = 753/753 (100%), Positives = 753/753 (100%) Query: 1 MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA 60 MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA Sbjct: 1 MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA 60 Query: 61 SGLQPAVRRLLQVKPEQVLLLPQPQAQNEEAAASSAQARLLQFRPDLRLLQPPTASDGAT 120 SGLQPAVRRLLQVKPEQVLLLPQPQAQNEEAAASSAQARLLQFRPDLRLLQPPTASDGAT Sbjct: 61 SGLQPAVRRLLQVKPEQVLLLPQPQAQNEEAAASSAQARLLQFRPDLRLLQPPTASDGAT 120 Query: 121 SRPELHPVQPLALHVKAKKQKLGPSLDQSVGPRGAVETGPRASRVVKLEGPGPALGYFRG 180 SRPELHPVQPLALHVKAKKQKLGPSLDQSVGPRGAVETGPRASRVVKLEGPGPALGYFRG Sbjct: 121 SRPELHPVQPLALHVKAKKQKLGPSLDQSVGPRGAVETGPRASRVVKLEGPGPALGYFRG 180 Query: 181 DEKGKLEAEEVMRDSMQGGAGKSPAAIREGVIKTEEPERLLEDCRLGAEPASNGLVHGSA 240 DEKGKLEAEEVMRDSMQGGAGKSPAAIREGVIKTEEPERLLEDCRLGAEPASNGLVHGSA Sbjct: 181 DEKGKLEAEEVMRDSMQGGAGKSPAAIREGVIKTEEPERLLEDCRLGAEPASNGLVHGSA 240 Query: 241 EVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTPVPTKMQS 300 EVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTPVPTKMQS Sbjct: 241 EVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTPVPTKMQS 300 Query: 301 LLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANP 360 LLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANP Sbjct: 301 LLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANP 360 Query: 361 AANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSV 420 AANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSV Sbjct: 361 AANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSV 420 Query: 421 SNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQNPITHPVGETSPAIQLPTPAVQSPS 480 SNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQNPITHPVGETSPAIQLPTPAVQSPS Sbjct: 421 SNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQNPITHPVGETSPAIQLPTPAVQSPS 480 Query: 481 PVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTGPSQTDTHQLHSEATHTVKQPTPVSL 540 PVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTGPSQTDTHQLHSEATHTVKQPTPVSL Sbjct: 481 PVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTGPSQTDTHQLHSEATHTVKQPTPVSL 540 Query: 541 ESANRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHP 600 ESANRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHP Sbjct: 541 ESANRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHP 600 Query: 601 ATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLSYYEDRYPKHE 660 ATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLSYYEDRYPKHE Sbjct: 601 ATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLSYYEDRYPKHE 660 Query: 661 GIFSTLNRDYSFRDYSSECTHSENSRSCENMNGTSYYNSHSHSGEENLNPVPQLDIGTLE 720 GIFSTLNRDYSFRDYSSECTHSENSRSCENMNGTSYYNSHSHSGEENLNPVPQLDIGTLE Sbjct: 661 GIFSTLNRDYSFRDYSSECTHSENSRSCENMNGTSYYNSHSHSGEENLNPVPQLDIGTLE 720 Query: 721 NVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRDL 753 NVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRDL Sbjct: 721 NVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRDL 753 >gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo sapiens] Length = 501 Score = 929 bits (2400), Expect = 0.0 Identities = 462/462 (100%), Positives = 462/462 (100%) Query: 1 MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA 60 MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA Sbjct: 1 MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA 60 Query: 61 SGLQPAVRRLLQVKPEQVLLLPQPQAQNEEAAASSAQARLLQFRPDLRLLQPPTASDGAT 120 SGLQPAVRRLLQVKPEQVLLLPQPQAQNEEAAASSAQARLLQFRPDLRLLQPPTASDGAT Sbjct: 61 SGLQPAVRRLLQVKPEQVLLLPQPQAQNEEAAASSAQARLLQFRPDLRLLQPPTASDGAT 120 Query: 121 SRPELHPVQPLALHVKAKKQKLGPSLDQSVGPRGAVETGPRASRVVKLEGPGPALGYFRG 180 SRPELHPVQPLALHVKAKKQKLGPSLDQSVGPRGAVETGPRASRVVKLEGPGPALGYFRG Sbjct: 121 SRPELHPVQPLALHVKAKKQKLGPSLDQSVGPRGAVETGPRASRVVKLEGPGPALGYFRG 180 Query: 181 DEKGKLEAEEVMRDSMQGGAGKSPAAIREGVIKTEEPERLLEDCRLGAEPASNGLVHGSA 240 DEKGKLEAEEVMRDSMQGGAGKSPAAIREGVIKTEEPERLLEDCRLGAEPASNGLVHGSA Sbjct: 181 DEKGKLEAEEVMRDSMQGGAGKSPAAIREGVIKTEEPERLLEDCRLGAEPASNGLVHGSA 240 Query: 241 EVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTPVPTKMQS 300 EVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTPVPTKMQS Sbjct: 241 EVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTPVPTKMQS 300 Query: 301 LLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANP 360 LLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANP Sbjct: 301 LLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANP 360 Query: 361 AANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSV 420 AANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSV Sbjct: 361 AANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSV 420 Query: 421 SNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQNPITHPV 462 SNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQNPITHPV Sbjct: 421 SNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQNPITHPV 462 >gi|169168396 PREDICTED: hypothetical protein [Homo sapiens] Length = 134 Score = 114 bits (284), Expect = 4e-25 Identities = 63/95 (66%), Positives = 71/95 (74%), Gaps = 5/95 (5%) Query: 1 MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA 60 MERAR EPPPQP PL PAP LPVEGTSFWAAA++ PPS P L AAA AT+ASSC E Sbjct: 1 MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCRE--- 57 Query: 61 SGLQP-AVRRLLQVKPEQVLLLPQPQAQNEEAAAS 94 GL P A ++LL+VK EQVLLLPQP + AA+S Sbjct: 58 -GLVPCAAQQLLEVKLEQVLLLPQPHVPGKGAASS 91 >gi|239748690 PREDICTED: hypothetical protein [Homo sapiens] Length = 134 Score = 114 bits (284), Expect = 4e-25 Identities = 63/95 (66%), Positives = 71/95 (74%), Gaps = 5/95 (5%) Query: 1 MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA 60 MERAR EPPPQP PL PAP LPVEGTSFWAAA++ PPS P L AAA AT+ASSC E Sbjct: 1 MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCRE--- 57 Query: 61 SGLQP-AVRRLLQVKPEQVLLLPQPQAQNEEAAAS 94 GL P A ++LL+VK EQVLLLPQP + AA+S Sbjct: 58 -GLVPCAAQQLLEVKLEQVLLLPQPHVPGKGAASS 91 >gi|239742713 PREDICTED: hypothetical protein [Homo sapiens] Length = 134 Score = 114 bits (284), Expect = 4e-25 Identities = 63/95 (66%), Positives = 71/95 (74%), Gaps = 5/95 (5%) Query: 1 MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVA 60 MERAR EPPPQP PL PAP LPVEGTSFWAAA++ PPS P L AAA AT+ASSC E Sbjct: 1 MERARLEPPPQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCRE--- 57 Query: 61 SGLQP-AVRRLLQVKPEQVLLLPQPQAQNEEAAAS 94 GL P A ++LL+VK EQVLLLPQP + AA+S Sbjct: 58 -GLVPCAAQQLLEVKLEQVLLLPQPHVPGKGAASS 91 >gi|4557853 transcription factor SOX9 [Homo sapiens] Length = 509 Score = 105 bits (263), Expect = 1e-22 Identities = 109/390 (27%), Positives = 158/390 (40%), Gaps = 76/390 (19%) Query: 330 SKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDE 389 S HVKRPMNAFMVWA+ R LA P +NAE+S LG W L+E +K+P+ +E Sbjct: 98 SSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEE 157 Query: 390 AQKIKEKHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPT-TVYPYRSPTYS 448 A++++ +H+++ P + YQPR +RK + T Q IS N SP S Sbjct: 158 AERLRVQHKKDHPDYKYQPR--RRKSVKNGQAEAEEATEQTHISPNAIFKALQADSPHSS 215 Query: 449 VVIPSLQNPITHPVGETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDPSLPVYPAL 508 + + +P H P PTP +P T QP A + + LP Sbjct: 216 SGMSEVHSPGEHSGQSQGP----PTPPT---TPKTDVQP---GKADLKREGRPLPEGGRQ 265 Query: 509 PPQRFTGPSQTDTHQLHSEATHTVK--------QPTP-------------VSLESANRIS 547 PP F D +L S+ ++ Q P V+ + IS Sbjct: 266 PPIDF---RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGIS 322 Query: 548 SSAST-AHARFATSTIQ-----PPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPA 601 S+A+T A A + Q PP++ P P++ P PQA+P P P H Sbjct: 323 STAATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQQPQAHTL 382 Query: 602 TLFGTPPRFS--------------------------FHHPYFLPGPHYFPSSTCPYSRPP 635 T + P S + P+ L PHY PS P +R Sbjct: 383 TTLSSEPGQSQRTHIKTEQLSPSHYSEQQQHSPQQIAYSPFNL--PHYSPSYP-PITRSQ 439 Query: 636 FGYGNFPSSMPECLSYYEDRYPKHEGIFST 665 + Y + +S SYY + G++ST Sbjct: 440 YDYTDHQNSS----SYYSHAAGQGTGLYST 465 Score = 31.2 bits (69), Expect = 3.7 Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 3/84 (3%) Query: 2 ERARPEPPPQPRPLRPAP--PPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAV 59 ++A P PP QP PAP PP P AA P + TL+ +S S Sbjct: 339 QQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIK 398 Query: 60 ASGLQPA-VRRLLQVKPEQVLLLP 82 L P+ Q P+Q+ P Sbjct: 399 TEQLSPSHYSEQQQHSPQQIAYSP 422 >gi|4759162 SRY-box 14 [Homo sapiens] Length = 240 Score = 99.0 bits (245), Expect = 1e-20 Identities = 76/239 (31%), Positives = 109/239 (45%), Gaps = 33/239 (13%) Query: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395 H+KRPMNAFMVW+R R +A+ NP +N+EIS +LG EW LSE +K+PY DEA++++ Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA 66 Query: 396 KHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQ 455 +H +E P + Y+PR K K VF PY T + L Sbjct: 67 QHMKEHPDYKYRPR-RKPKNLLKKDRYVFP--------------LPYLGDTDPLKAAGL- 110 Query: 456 NPITHPVGETSPAIQLPTPA----VQSPSPVTLFQPS--VSSAAQVAVQDPSLPVYPALP 509 PVG + + P A + +P +L P+ SSA Q + P ALP Sbjct: 111 -----PVGASDGLLSAPEKARAFLPPASAPYSLLDPAQFSSSAIQKMGEVPHTLATGALP 165 Query: 510 PQRFTGPSQTDTHQLHSEATHTVKQPTPVSLESANRISSSASTAHARFATSTIQPPREY 568 G L + HT P+P + + +A ++ ST+QPP Y Sbjct: 166 YASTLGYQNGAFGSLSCPSQHTHTHPSPTNPGYVVPCNCTA------WSASTLQPPVAY 218 >gi|13899269 SRY-box 7 [Homo sapiens] Length = 388 Score = 92.0 bits (227), Expect = 2e-18 Identities = 42/104 (40%), Positives = 63/104 (60%) Query: 312 DVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQL 371 D L+ S +P P K ++RPMNAFMVWA+ R LA NP +NAE+S L Sbjct: 20 DAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKML 79 Query: 372 GLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKR 415 G W L+ QK+PY DEA++++ +H +++P + Y+PR K+ + Sbjct: 80 GKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAK 123 >gi|5902108 SRY-box 21 [Homo sapiens] Length = 276 Score = 90.5 bits (223), Expect = 5e-18 Identities = 38/74 (51%), Positives = 55/74 (74%) Query: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395 HVKRPMNAFMVW+R R +A+ NP +N+EIS +LG EW L+E +K+P+ DEA++++ Sbjct: 7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRA 66 Query: 396 KHREEFPGWVYQPR 409 H +E P + Y+PR Sbjct: 67 MHMKEHPDYKYRPR 80 >gi|4507225 sex determining region Y [Homo sapiens] Length = 204 Score = 89.0 bits (219), Expect = 1e-17 Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 1/85 (1%) Query: 337 VKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEK 396 VKRPMNAF+VW+R R +A NP N+EIS QLG +W L+E +K P++ EAQK++ Sbjct: 60 VKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAM 119 Query: 397 HREEFPGWVYQPRPGKRKRFPLSVS 421 HRE++P + Y+PR K K P + S Sbjct: 120 HREKYPNYKYRPR-RKAKMLPKNCS 143 >gi|5902106 SRY-box 15 [Homo sapiens] Length = 233 Score = 88.6 bits (218), Expect = 2e-17 Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 22/178 (12%) Query: 337 VKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEK 396 VKRPMNAFMVW+ R +A+ NP +N+EIS +LG +W L E++K+P+ +EA++++ + Sbjct: 49 VKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRAR 108 Query: 397 HREEFPGWVYQPRPGKR------KRFPLSVSNVFSGTT---QNIISTNPTTVYPYRSPTY 447 H ++P + Y+PR + R N+ SG +T P+ + YR P+Y Sbjct: 109 HLRDYPDYKYRPRRKAKSSGAGPSRCGQGRGNLASGGPLWGPGYATTQPSRGFGYRPPSY 168 Query: 448 SVV-IP--------SLQNPITHPVGETSPAIQ---LPT-PAVQSPSPVTLFQPSVSSA 492 S +P L+ P + ++ P +Q LPT P T + P ++ A Sbjct: 169 STAYLPGSYGSSHCKLEAPSPCSLPQSDPRLQGELLPTYTHYLPPGSPTPYNPPLAGA 226 >gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo sapiens] Length = 841 Score = 87.8 bits (216), Expect = 3e-17 Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 13/192 (6%) Query: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395 H+KRPMNAFMVWA+ R + +A P +N+ IS LG W +S ++K+PYY+E ++ + Sbjct: 633 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 692 Query: 396 KHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQ 455 H E++P + Y+PRP ++ + + G + ++ + + + V Q Sbjct: 693 IHLEKYPNYKYKPRP--KRTCIVDGKKLRIGEYKQLMRSRRQEM-----RQFFTVGQQPQ 745 Query: 456 NPITHPVGETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTG 515 PIT G P T A +PSP S +SA+ +PSLPV + + G Sbjct: 746 IPITTGTGVVYPG--AITMATTTPSPQMTSDCSSTSAS----PEPSLPVIQSTYGMKTDG 799 Query: 516 PSQTDTHQLHSE 527 S ++ E Sbjct: 800 GSLAGNEMINGE 811 >gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo sapiens] Length = 801 Score = 87.8 bits (216), Expect = 3e-17 Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 13/192 (6%) Query: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395 H+KRPMNAFMVWA+ R + +A P +N+ IS LG W +S ++K+PYY+E ++ + Sbjct: 593 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 652 Query: 396 KHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQ 455 H E++P + Y+PRP ++ + + G + ++ + + + V Q Sbjct: 653 IHLEKYPNYKYKPRP--KRTCIVDGKKLRIGEYKQLMRSRRQEM-----RQFFTVGQQPQ 705 Query: 456 NPITHPVGETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTG 515 PIT G P T A +PSP S +SA+ +PSLPV + + G Sbjct: 706 IPITTGTGVVYPG--AITMATTTPSPQMTSDCSSTSAS----PEPSLPVIQSTYGMKTDG 759 Query: 516 PSQTDTHQLHSE 527 S ++ E Sbjct: 760 GSLAGNEMINGE 771 >gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo sapiens] Length = 804 Score = 87.8 bits (216), Expect = 3e-17 Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 13/192 (6%) Query: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395 H+KRPMNAFMVWA+ R + +A P +N+ IS LG W +S ++K+PYY+E ++ + Sbjct: 596 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 655 Query: 396 KHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQ 455 H E++P + Y+PRP ++ + + G + ++ + + + V Q Sbjct: 656 IHLEKYPNYKYKPRP--KRTCIVDGKKLRIGEYKQLMRSRRQEM-----RQFFTVGQQPQ 708 Query: 456 NPITHPVGETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTG 515 PIT G P T A +PSP S +SA+ +PSLPV + + G Sbjct: 709 IPITTGTGVVYPG--AITMATTTPSPQMTSDCSSTSAS----PEPSLPVIQSTYGMKTDG 762 Query: 516 PSQTDTHQLHSE 527 S ++ E Sbjct: 763 GSLAGNEMINGE 774 >gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo sapiens] Length = 808 Score = 87.8 bits (216), Expect = 3e-17 Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 13/192 (6%) Query: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395 H+KRPMNAFMVWA+ R + +A P +N+ IS LG W +S ++K+PYY+E ++ + Sbjct: 600 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 659 Query: 396 KHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQ 455 H E++P + Y+PRP ++ + + G + ++ + + + V Q Sbjct: 660 IHLEKYPNYKYKPRP--KRTCIVDGKKLRIGEYKQLMRSRRQEM-----RQFFTVGQQPQ 712 Query: 456 NPITHPVGETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTG 515 PIT G P T A +PSP S +SA+ +PSLPV + + G Sbjct: 713 IPITTGTGVVYPG--AITMATTTPSPQMTSDCSSTSAS----PEPSLPVIQSTYGMKTDG 766 Query: 516 PSQTDTHQLHSE 527 S ++ E Sbjct: 767 GSLAGNEMINGE 778 >gi|28195386 sex-determining region Y-box 2 [Homo sapiens] Length = 317 Score = 87.4 bits (215), Expect = 4e-17 Identities = 39/79 (49%), Positives = 56/79 (70%) Query: 331 KDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEA 390 K+ VKRPMNAFMVW+R R +A+ NP +N+EIS +LG EW LSE +K+P+ DEA Sbjct: 35 KNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEA 94 Query: 391 QKIKEKHREEFPGWVYQPR 409 ++++ H +E P + Y+PR Sbjct: 95 KRLRALHMKEHPDYKYRPR 113 >gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens] Length = 391 Score = 87.0 bits (214), Expect = 6e-17 Identities = 38/80 (47%), Positives = 56/80 (70%) Query: 330 SKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDE 389 +K VKRPMNAFMVW+R R +A+ NP +N+EIS +LG EW +SE +K+P+ DE Sbjct: 44 AKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDE 103 Query: 390 AQKIKEKHREEFPGWVYQPR 409 A++++ H +E P + Y+PR Sbjct: 104 AKRLRALHMKEHPDYKYRPR 123 >gi|4507161 SRY-box 11 [Homo sapiens] Length = 441 Score = 86.3 bits (212), Expect = 1e-16 Identities = 36/84 (42%), Positives = 57/84 (67%) Query: 326 DTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKP 385 D + K +GH+KRPMNAFMVW++I R + + +P +NAEIS +LG W L + +K P Sbjct: 38 DPDWCKTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIP 97 Query: 386 YYDEAQKIKEKHREEFPGWVYQPR 409 + EA++++ KH ++P + Y+PR Sbjct: 98 FIREAERLRLKHMADYPDYKYRPR 121 >gi|41406089 SRY-box 13 [Homo sapiens] Length = 622 Score = 85.1 bits (209), Expect = 2e-16 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 8/95 (8%) Query: 329 FSKDRNG-HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYY 387 F + RN H+KRPMNAFMVWA+ R + +A P +N+ IS LG W ++ ++K+PYY Sbjct: 415 FPESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYY 474 Query: 388 DEAQKIKEKHREEFPGWVYQPRP-------GKRKR 415 +E ++ +H E++P + Y+PRP GKR R Sbjct: 475 EEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLR 509 >gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens] Length = 474 Score = 84.7 bits (208), Expect = 3e-16 Identities = 39/91 (42%), Positives = 59/91 (64%), Gaps = 1/91 (1%) Query: 320 SDAGIPDTP-FSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKL 378 S G D P + K +GH+KRPMNAFMVW++I R + + +P +NAEIS +LG W L Sbjct: 41 STGGKADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLL 100 Query: 379 SEEQKKPYYDEAQKIKEKHREEFPGWVYQPR 409 + K P+ EA++++ KH ++P + Y+PR Sbjct: 101 KDSDKIPFIREAERLRLKHMADYPDYKYRPR 131 >gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens] Length = 446 Score = 84.3 bits (207), Expect = 4e-16 Identities = 38/77 (49%), Positives = 54/77 (70%) Query: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395 HVKRPMNAFMVWA+ R LA P +NAE+S LG W LSE +K+P+ +EA++++ Sbjct: 101 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRV 160 Query: 396 KHREEFPGWVYQPRPGK 412 +H+++ P + YQPR K Sbjct: 161 QHKKDHPDYKYQPRRRK 177 >gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens] Length = 446 Score = 83.6 bits (205), Expect = 6e-16 Identities = 35/73 (47%), Positives = 54/73 (73%) Query: 337 VKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEK 396 VKRPMNAFMVW+R R +A NP +N+EIS +LG +W L++ +K+P+ DEA++++ Sbjct: 139 VKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAV 198 Query: 397 HREEFPGWVYQPR 409 H +E+P + Y+PR Sbjct: 199 HMKEYPDYKYRPR 211 Score = 33.9 bits (76), Expect = 0.57 Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 26/146 (17%) Query: 7 EPPPQPRPLRPAPPPLP----VEGTSFWAAAMEPPPSSPTLSAAASATLASSCG------ 56 +PP P P PP LP + + M PP + ++ AA+A AS G Sbjct: 283 QPPSMSSP--PPPPALPPMHRYDMAGLQYSPMMPPGAQSYMNVAAAAAAASGYGGMAPSA 340 Query: 57 ---EAVASGLQP-------AVRRLLQVKPEQVLLLPQPQAQNEEAAASSAQARLLQFRPD 106 A A G QP A + + P ++ +P + A+ S +A L R Sbjct: 341 TAAAAAAYGQQPATAAAAAAAAAAMSLGPMGSVVKSEPSSPPPAIASHSQRACLGDLRDM 400 Query: 107 LRLLQPP--TASDGATSRP--ELHPV 128 + + PP A+D A+ P LH V Sbjct: 401 ISMYLPPGGDAADAASPLPGGRLHGV 426 >gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens] Length = 466 Score = 82.4 bits (202), Expect = 1e-15 Identities = 37/77 (48%), Positives = 53/77 (68%) Query: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395 HVKRPMNAFMVWA+ R LA P +NAE+S LG W L+E K+P+ +EA++++ Sbjct: 103 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 162 Query: 396 KHREEFPGWVYQPRPGK 412 +H+++ P + YQPR K Sbjct: 163 QHKKDHPDYKYQPRRRK 179 >gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens] Length = 315 Score = 82.4 bits (202), Expect = 1e-15 Identities = 36/91 (39%), Positives = 58/91 (63%) Query: 319 PSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKL 378 P++ G + + K +GH+KRPMNAFMVW++ R + P +NAEIS +LG W L Sbjct: 22 PAEEGAREPGWCKTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLL 81 Query: 379 SEEQKKPYYDEAQKIKEKHREEFPGWVYQPR 409 + +K P+ EA++++ KH ++P + Y+PR Sbjct: 82 QDSEKIPFVREAERLRLKHMADYPDYKYRPR 112 >gi|11967991 SRY-box 17 [Homo sapiens] Length = 414 Score = 82.0 bits (201), Expect = 2e-15 Identities = 36/96 (37%), Positives = 62/96 (64%), Gaps = 1/96 (1%) Query: 319 PSDAGIPDTPFSKDRN-GHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNK 377 P+++G P + + ++RPMNAFMVWA+ R LA+ NP +NAE+S LG W Sbjct: 49 PANSGAPAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKA 108 Query: 378 LSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKR 413 L+ +K+P+ +EA++++ +H ++ P + Y+PR K+ Sbjct: 109 LTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQ 144 >gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo sapiens] Length = 377 Score = 82.0 bits (201), Expect = 2e-15 Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 6/95 (6%) Query: 322 AGIPDTPFSKDRNG------HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEW 375 AG+ ++ ++ G H+KRPMNAFMVWA+ R + +A P +N+ IS LG W Sbjct: 149 AGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRW 208 Query: 376 NKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRP 410 ++ +K+PYY+E ++ ++H E++P + Y+PRP Sbjct: 209 KAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRP 243 >gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo sapiens] Length = 750 Score = 82.0 bits (201), Expect = 2e-15 Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 6/95 (6%) Query: 322 AGIPDTPFSKDRNG------HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEW 375 AG+ ++ ++ G H+KRPMNAFMVWA+ R + +A P +N+ IS LG W Sbjct: 522 AGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRW 581 Query: 376 NKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRP 410 ++ +K+PYY+E ++ ++H E++P + Y+PRP Sbjct: 582 KAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRP 616 >gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo sapiens] Length = 763 Score = 82.0 bits (201), Expect = 2e-15 Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 6/95 (6%) Query: 322 AGIPDTPFSKDRNG------HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEW 375 AG+ ++ ++ G H+KRPMNAFMVWA+ R + +A P +N+ IS LG W Sbjct: 535 AGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRW 594 Query: 376 NKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRP 410 ++ +K+PYY+E ++ ++H E++P + Y+PRP Sbjct: 595 KAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRP 629 >gi|8924248 SRY-box 18 [Homo sapiens] Length = 384 Score = 79.7 bits (195), Expect = 9e-15 Identities = 69/252 (27%), Positives = 109/252 (43%), Gaps = 26/252 (10%) Query: 337 VKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEK 396 ++RPMNAFMVWA+ R LA+ NP +NA +S LG W +L+ +K+P+ +EA++++ + Sbjct: 85 IRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQ 144 Query: 397 HREEFPGWVYQPRPGK--RKRFPLSVSNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSL 454 H + P + Y+PR K RK L + G P P P S + Sbjct: 145 HLRDHPNYKYRPRRKKQARKARRLEPGLLLPGLA-------PPQPPPEPFPAASGSARAF 197 Query: 455 QNPITHPVGETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFT 514 + P+G + LPTP SP+ +P ++ P+ P AL P F Sbjct: 198 RE--LPPLGAEFDGLGLPTP---ERSPLDGLEPGEAA----FFPPPAAPEDCALRP--FR 246 Query: 515 GPSQTDTHQLHSEATHTVKQPTPVSLESANRISSSASTAHARFATSTIQPPREYSSVSPC 574 P +L + P +L +A + A + T P +SP Sbjct: 247 APYAPT--ELSRDPGGCYGAPLAEALRTAPPAAPLAGLYYGTLGTPGPYP----GPLSPP 300 Query: 575 PRSAPIPQASPI 586 P + P+ A P+ Sbjct: 301 PEAPPLESAEPL 312 >gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens] Length = 579 Score = 73.9 bits (180), Expect = 5e-13 Identities = 79/356 (22%), Positives = 133/356 (37%), Gaps = 69/356 (19%) Query: 235 LVHGSAEVILAPTSGAFG-PHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTP 293 LV + + T+G F P+ L + ++ PP PP + T +P Sbjct: 237 LVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHM------VPPHHTLHTTGIPHPA 290 Query: 294 VPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRP 353 + T P+VK E+ + L S + + H+K+P+NAFM++ + R Sbjct: 291 IVT-------PTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRA 343 Query: 354 ALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKR 413 + +A I+ LG W+ LS E++ YY+ A+K ++ H + +PGW + GK+ Sbjct: 344 KVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKK 403 Query: 414 K----------------------RFPLSVSNVFSGTTQ---------------------- 429 K RF L N + G + Sbjct: 404 KKRKRDKQPGETNDLSAPKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSD 463 Query: 430 -NIISTNPTTVYPYRSPTYSVVIPSLQNPITHPVGETSPAIQLPTPAVQSPSPVTLFQPS 488 +++ + P + SP Q T P+ + L ++ P P L + Sbjct: 464 GSLLDSPPPSPNLLGSPPRDA---KSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLLAEA 520 Query: 489 VSSAAQV----AVQDPSLPVYPALPPQRFTGPSQTDTHQLHSEATHTVKQPTPVSL 540 A+ + A+ P + PA P PS T LHS ++ QP P+SL Sbjct: 521 THKASALCPNGALDLPPAALQPAAPSSSIAQPS---TSSLHSHSSLAGTQPQPLSL 573 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.130 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,748,259 Number of Sequences: 37866 Number of extensions: 2444190 Number of successful extensions: 18620 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 251 Number of HSP's successfully gapped in prelim test: 736 Number of HSP's that attempted gapping in prelim test: 11903 Number of HSP's gapped (non-prelim): 5851 length of query: 753 length of database: 18,247,518 effective HSP length: 110 effective length of query: 643 effective length of database: 14,082,258 effective search space: 9054891894 effective search space used: 9054891894 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.