Guide to the Human Genome
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Name: CSRP2BP Sequence: fasta or formatted (654aa) NCBI GI: 29570788
Description:

CSRP2 binding protein isoform b

Referenced in:

LIM Domain Proteins

Other entries for this name:
alt prot [782aa] CSRP2 binding protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         40           2
 C cysteine            1.4          9           1
 D aspartate           6.0         39           3
 E glutamate           6.9         45           3
 F phenylalanine       4.1         27           2
 G glycine             5.7         37           2
 H histidine           2.0         13           1
 I isoleucine          4.7         31           2
 K lysine              7.0         46           2
 L leucine             8.9         58           3
 M methionine          2.4         16           1
 N asparagine          1.5         10           1
 P proline             8.0         52           3
 Q glutamine           3.4         22           1
 R arginine            7.3         48           2
 S serine              8.4         55           3
 T threonine           5.5         36           2
 V valine              5.5         36           3
 W tryptophan          1.4          9           2
 Y tyrosine            3.8         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CSRP2 binding protein isoform b 
CSRP2BP               1.000   CSRP2 binding protein isoform a 
SPEN                  0.014   spen homolog, transcriptional regulator 
ZC3H4                 0.012   zinc finger CCCH-type containing 4 
NAT13                 0.011   N-acetyltransferase 13 
CREBBP                0.011   CREB binding protein isoform b 
CREBBP                0.011   CREB binding protein isoform a 
MLL                   0.011   myeloid/lymphoid or mixed-lineage leukemia protein [...
NAP5                  0.011   Nck-associated protein 5 isoform 1 
APC                   0.010   adenomatous polyposis coli 
APC                   0.010   adenomatous polyposis coli 
APC                   0.010   adenomatous polyposis coli 
MAP1A                 0.010   microtubule-associated protein 1A 
MAML3                 0.009   mastermind-like 3 
FLJ22184              0.009   PREDICTED: hypothetical protein FLJ22184 
MIER1                 0.008   mesoderm induction early response 1 isoform g [Homo...
MIER1                 0.008   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.008   mesoderm induction early response 1 isoform f [Homo...
MIER1                 0.008   mesoderm induction early response 1 isoform e [Homo...
MIER1                 0.008   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.008   mesoderm induction early response 1 isoform c [Homo...
MIER1                 0.008   mesoderm induction early response 1 isoform b [Homo...
MIER1                 0.008   mesoderm induction early response 1 isoform a [Homo...
NCL                   0.008   nucleolin 
PRDM2                 0.008   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.008   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.008   retinoblastoma protein-binding zinc finger protein i...
RSL1D1                0.008   ribosomal L1 domain containing 1 
FARP2                 0.008   FERM, RhoGEF and pleckstrin domain protein 2 
RXRB                  0.008   retinoid X receptor, beta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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