Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MIER1 Sequence: fasta or formatted (529aa) NCBI GI: 225735615
Description:

mesoderm induction early response 1 isoform a

Referenced in:

Mammary Tissues

Other entries for this name:
alt prot [512aa] mesoderm induction early response 1 isoform c
alt prot [433aa] mesoderm induction early response 1 isoform f
alt mRNA [529aa] mesoderm induction early response 1 isoform a
alt prot [565aa] mesoderm induction early response 1 isoform b
alt prot [450aa] mesoderm induction early response 1 isoform d
alt prot [486aa] mesoderm induction early response 1 isoform e
alt prot [485aa] mesoderm induction early response 1 isoform h
alt prot [370aa] mesoderm induction early response 1 isoform i
alt prot [470aa] mesoderm induction early response 1 isoform g
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         27           2
 C cysteine            1.3          7           1
 D aspartate           9.1         48           2
 E glutamate          15.1         80           9
 F phenylalanine       4.2         22           2
 G glycine             6.0         32           2
 H histidine           1.9         10           1
 I isoleucine          3.0         16           2
 K lysine              5.9         31           3
 L leucine             5.7         30           2
 M methionine          2.3         12           2
 N asparagine          6.0         32           1
 P proline             4.3         23           3
 Q glutamine           3.0         16           2
 R arginine            4.7         25           3
 S serine              9.3         49           3
 T threonine           4.5         24           2
 V valine              4.3         23           1
 W tryptophan          1.1          6           1
 Y tyrosine            3.0         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mesoderm induction early response 1 isoform a [Homo... 
MIER1                 1.000   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.957   mesoderm induction early response 1 isoform c [Homo...
MIER1                 0.956   mesoderm induction early response 1 isoform b [Homo...
MIER1                 0.910   mesoderm induction early response 1 isoform h [Homo...
MIER1                 0.843   mesoderm induction early response 1 isoform g [Homo...
MIER1                 0.806   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.762   mesoderm induction early response 1 isoform f [Homo...
MIER1                 0.761   mesoderm induction early response 1 isoform e [Homo...
MIER1                 0.648   mesoderm induction early response 1 isoform i [Homo...
MIER3                 0.341   mesoderm induction early response 1, family member 3...
MIER2                 0.257   mesoderm induction early response 1, family member 2...
SRCAP                 0.044   Snf2-related CBP activator protein 
MTA2                  0.039   metastasis-associated protein 2 
MTA3                  0.037   metastasis associated 1 family, member 3 
RERE                  0.031   atrophin-1 like protein isoform a 
RERE                  0.031   atrophin-1 like protein isoform a 
NCOR2                 0.030   nuclear receptor co-repressor 2 isoform 2 
SETD1B                0.030   SET domain containing 1B 
MTA1                  0.028   metastasis associated protein 
NCOR2                 0.026   nuclear receptor co-repressor 2 isoform 1 
CDC2L2                0.025   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.025   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MYT1L                 0.025   myelin transcription factor 1-like 
SETD1A                0.025   SET domain containing 1A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press