Guide to the Human Genome
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Name: MIER1 Sequence: fasta or formatted (486aa) NCBI GI: 225735612
Description:

mesoderm induction early response 1 isoform e

Referenced in:

Mammary Tissues

Other entries for this name:
alt prot [512aa] mesoderm induction early response 1 isoform c
alt prot [433aa] mesoderm induction early response 1 isoform f
alt prot [529aa] mesoderm induction early response 1 isoform a
alt prot [565aa] mesoderm induction early response 1 isoform b
alt prot [450aa] mesoderm induction early response 1 isoform d
alt prot [529aa] mesoderm induction early response 1 isoform a
alt prot [485aa] mesoderm induction early response 1 isoform h
alt prot [370aa] mesoderm induction early response 1 isoform i
alt prot [470aa] mesoderm induction early response 1 isoform g
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         29           2
 C cysteine            1.4          7           1
 D aspartate           8.6         42           2
 E glutamate          14.0         68           9
 F phenylalanine       3.9         19           2
 G glycine             7.4         36           4
 H histidine           1.4          7           1
 I isoleucine          3.3         16           2
 K lysine              4.9         24           3
 L leucine             6.0         29           2
 M methionine          2.3         11           2
 N asparagine          4.7         23           1
 P proline             3.9         19           3
 Q glutamine           3.3         16           2
 R arginine            5.1         25           2
 S serine             10.9         53           3
 T threonine           3.7         18           1
 V valine              4.7         23           2
 W tryptophan          1.2          6           1
 Y tyrosine            3.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mesoderm induction early response 1 isoform e [Homo... 
MIER1                 0.957   mesoderm induction early response 1 isoform b [Homo...
MIER1                 0.880   mesoderm induction early response 1 isoform f [Homo...
MIER1                 0.880   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.867   mesoderm induction early response 1 isoform g [Homo...
MIER1                 0.838   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.838   mesoderm induction early response 1 isoform c [Homo...
MIER1                 0.838   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.787   mesoderm induction early response 1 isoform h [Homo...
MIER1                 0.756   mesoderm induction early response 1 isoform i [Homo...
MIER3                 0.372   mesoderm induction early response 1, family member 3...
MIER2                 0.282   mesoderm induction early response 1, family member 2...
SRCAP                 0.049   Snf2-related CBP activator protein 
MTA2                  0.043   metastasis-associated protein 2 
MTA3                  0.040   metastasis associated 1 family, member 3 
RERE                  0.034   atrophin-1 like protein isoform a 
RERE                  0.034   atrophin-1 like protein isoform a 
SETD1B                0.033   SET domain containing 1B 
MTA1                  0.031   metastasis associated protein 
NCOR2                 0.030   nuclear receptor co-repressor 2 isoform 2 
CDC2L2                0.028   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.028   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MYT1L                 0.028   myelin transcription factor 1-like 
SETD1A                0.028   SET domain containing 1A 
ZNF541                0.028   zinc finger protein 541 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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