Guide to the Human Genome
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Name: MIER1 Sequence: fasta or formatted (470aa) NCBI GI: 225735631
Description:

mesoderm induction early response 1 isoform g

Referenced in:

Mammary Tissues

Other entries for this name:
alt prot [512aa] mesoderm induction early response 1 isoform c
alt prot [433aa] mesoderm induction early response 1 isoform f
alt prot [529aa] mesoderm induction early response 1 isoform a
alt prot [565aa] mesoderm induction early response 1 isoform b
alt prot [450aa] mesoderm induction early response 1 isoform d
alt prot [486aa] mesoderm induction early response 1 isoform e
alt prot [529aa] mesoderm induction early response 1 isoform a
alt prot [485aa] mesoderm induction early response 1 isoform h
alt prot [370aa] mesoderm induction early response 1 isoform i
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         25           2
 C cysteine            1.5          7           1
 D aspartate           8.5         40           2
 E glutamate          14.9         70           9
 F phenylalanine       4.3         20           2
 G glycine             5.7         27           2
 H histidine           1.7          8           1
 I isoleucine          3.8         18           2
 K lysine              5.3         25           3
 L leucine             6.4         30           2
 M methionine          2.3         11           2
 N asparagine          5.3         25           1
 P proline             4.3         20           3
 Q glutamine           3.4         16           2
 R arginine            4.5         21           2
 S serine              9.8         46           3
 T threonine           3.8         18           1
 V valine              4.7         22           1
 W tryptophan          1.3          6           1
 Y tyrosine            3.2         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mesoderm induction early response 1 isoform g [Homo... 
MIER1                 0.957   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.957   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.944   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.908   mesoderm induction early response 1 isoform c [Homo...
MIER1                 0.907   mesoderm induction early response 1 isoform b [Homo...
MIER1                 0.895   mesoderm induction early response 1 isoform f [Homo...
MIER1                 0.894   mesoderm induction early response 1 isoform e [Homo...
MIER1                 0.854   mesoderm induction early response 1 isoform h [Homo...
MIER1                 0.767   mesoderm induction early response 1 isoform i [Homo...
MIER3                 0.383   mesoderm induction early response 1, family member 3...
MIER2                 0.291   mesoderm induction early response 1, family member 2...
SRCAP                 0.050   Snf2-related CBP activator protein 
MTA2                  0.044   metastasis-associated protein 2 
MTA3                  0.042   metastasis associated 1 family, member 3 
RERE                  0.035   atrophin-1 like protein isoform a 
RERE                  0.035   atrophin-1 like protein isoform a 
SETD1B                0.034   SET domain containing 1B 
MTA1                  0.032   metastasis associated protein 
NCOR2                 0.031   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.030   nuclear receptor co-repressor 2 isoform 1 
CDC2L2                0.029   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.029   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.029   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.029   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.029   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.029   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.029   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MYT1L                 0.029   myelin transcription factor 1-like 
SETD1A                0.029   SET domain containing 1A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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