Guide to the Human Genome
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Name: MIER1 Sequence: fasta or formatted (512aa) NCBI GI: 118130815
Description:

mesoderm induction early response 1 isoform c

Referenced in:

Mammary Tissues

Other entries for this name:
alt prot [433aa] mesoderm induction early response 1 isoform f
alt prot [529aa] mesoderm induction early response 1 isoform a
alt prot [565aa] mesoderm induction early response 1 isoform b
alt prot [450aa] mesoderm induction early response 1 isoform d
alt prot [486aa] mesoderm induction early response 1 isoform e
alt prot [529aa] mesoderm induction early response 1 isoform a
alt prot [485aa] mesoderm induction early response 1 isoform h
alt prot [370aa] mesoderm induction early response 1 isoform i
alt prot [470aa] mesoderm induction early response 1 isoform g
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         28           2
 C cysteine            1.2          6           1
 D aspartate           9.2         47           2
 E glutamate          15.8         81           9
 F phenylalanine       3.5         18           2
 G glycine             6.2         32           2
 H histidine           2.0         10           1
 I isoleucine          3.1         16           2
 K lysine              6.1         31           3
 L leucine             5.3         27           2
 M methionine          2.1         11           2
 N asparagine          5.9         30           1
 P proline             4.5         23           3
 Q glutamine           2.9         15           2
 R arginine            4.9         25           3
 S serine              9.4         48           3
 T threonine           4.3         22           2
 V valine              4.5         23           1
 W tryptophan          0.8          4           1
 Y tyrosine            2.9         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mesoderm induction early response 1 isoform c [Homo... 
MIER1                 0.995   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.995   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.994   mesoderm induction early response 1 isoform b [Homo...
MIER1                 0.947   mesoderm induction early response 1 isoform h [Homo...
MIER1                 0.832   mesoderm induction early response 1 isoform g [Homo...
MIER1                 0.797   mesoderm induction early response 1 isoform f [Homo...
MIER1                 0.793   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.792   mesoderm induction early response 1 isoform e [Homo...
MIER1                 0.674   mesoderm induction early response 1 isoform i [Homo...
MIER3                 0.359   mesoderm induction early response 1, family member 3...
MIER2                 0.267   mesoderm induction early response 1, family member 2...
SRCAP                 0.046   Snf2-related CBP activator protein 
MTA2                  0.040   metastasis-associated protein 2 
MTA3                  0.038   metastasis associated 1 family, member 3 
RERE                  0.032   atrophin-1 like protein isoform a 
RERE                  0.032   atrophin-1 like protein isoform a 
NCOR2                 0.031   nuclear receptor co-repressor 2 isoform 2 
SETD1B                0.031   SET domain containing 1B 
MTA1                  0.029   metastasis associated protein 
NCOR2                 0.027   nuclear receptor co-repressor 2 isoform 1 
CDC2L2                0.026   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.026   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MYT1L                 0.026   myelin transcription factor 1-like 
SETD1A                0.026   SET domain containing 1A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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