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Name: KCNS2 Sequence: fasta or formatted (477aa) NCBI GI: 45383011
Description:

potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         26           1
 C cysteine            1.9          9           2
 D aspartate           5.0         24           2
 E glutamate           6.5         31           2
 F phenylalanine       6.5         31           2
 G glycine             5.9         28           2
 H histidine           2.1         10           1
 I isoleucine          5.7         27           2
 K lysine              3.6         17           1
 L leucine            12.2         58           4
 M methionine          2.3         11           1
 N asparagine          3.8         18           1
 P proline             3.8         18           1
 Q glutamine           2.7         13           1
 R arginine            5.9         28           2
 S serine              9.0         43           2
 T threonine           4.8         23           2
 V valine              7.5         36           3
 W tryptophan          1.7          8           3
 Y tyrosine            3.8         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, delayed-rectifier, ... 
KCNS3                 0.522   potassium voltage-gated channel delayed-rectifier pr...
KCNS1                 0.473   potassium voltage-gated channel delayed-rectifier pr...
KCNB2                 0.379   potassium voltage-gated channel, Shab-related subfam...
KCNB1                 0.374   potassium voltage-gated channel, Shab-related subfami...
KCNV1                 0.343   potassium channel, subfamily V, member 1 
KCNF1                 0.302   potassium voltage-gated channel, subfamily F, member...
KCNG4                 0.283   potassium voltage-gated channel, subfamily G, member...
KCNV2                 0.283   potassium channel, subfamily V, member 2 
KCNG1                 0.275   potassium voltage-gated channel, subfamily G, member...
KCNG3                 0.251   potassium voltage-gated channel, subfamily G, member...
KCNG3                 0.246   potassium voltage-gated channel, subfamily G, member...
KCNG2                 0.245   potassium voltage-gated channel, subfamily G, member ...
KCNA10                0.237   potassium voltage-gated channel, shaker-related subfa...
KCNA7                 0.229   potassium voltage-gated channel, shaker-related subf...
KCNA2                 0.222   potassium voltage-gated channel, shaker-related subfa...
KCNA1                 0.222   potassium voltage-gated channel subfamily A member ...
KCNC2                 0.218   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.218   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.218   Shaw-related voltage-gated potassium channel protein...
KCNA3                 0.216   potassium voltage-gated channel, shaker-related subf...
KCNC3                 0.214   Shaw-related voltage-gated potassium channel protein...
KCNC1                 0.213   Shaw-related voltage-gated potassium channel protein ...
KCNC1                 0.213   Shaw-related voltage-gated potassium channel protei...
KCND3                 0.213   potassium voltage-gated channel, Shal-related subfam...
KCND3                 0.213   potassium voltage-gated channel, Shal-related subfam...
KCNA6                 0.212   potassium voltage-gated channel, shaker-related subfa...
KCNA4                 0.211   potassium voltage-gated channel, shaker-related subfa...
KCNA5                 0.207   potassium voltage-gated channel, shaker-related subf...
KCND1                 0.206   potassium voltage-gated channel, Shal-related subfam...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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