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Search of human proteins with 26024195
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|26024195 cornifelin [Homo sapiens]
(112 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|26024195 cornifelin [Homo sapiens] 253 2e-68
gi|71274180 PLAC8-like 1 [Homo sapiens] 102 5e-23
gi|195222740 placenta-specific 8 [Homo sapiens] 83 4e-17
gi|195222737 placenta-specific 8 [Homo sapiens] 83 4e-17
gi|7706158 placenta-specific 8 [Homo sapiens] 83 4e-17
gi|169212026 PREDICTED: keratin associated protein [Homo sapiens] 31 0.19
gi|169211819 PREDICTED: keratin associated protein [Homo sapiens] 31 0.24
gi|239751310 PREDICTED: keratin associated protein 4-9 isoform 2... 31 0.24
gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1... 31 0.24
gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo ... 31 0.24
gi|63053517 keratin associated protein 10-5 [Homo sapiens] 30 0.41
gi|118572608 keratin associated protein 4-5 [Homo sapiens] 30 0.41
gi|239758032 PREDICTED: keratin associated protein 4-8 isoform 2... 30 0.54
gi|239756796 PREDICTED: similar to keratin associated protein 4-... 30 0.54
gi|188528609 secreted frizzled-related protein 5 [Homo sapiens] 29 0.71
gi|225690551 keratin associated protein 4-9 [Homo sapiens] 29 0.71
gi|5453555 ras-related nuclear protein [Homo sapiens] 29 0.92
gi|154759249 keratin associated protein 10-11 [Homo sapiens] 29 0.92
gi|38490571 keratin associated protein 10-7 [Homo sapiens] 29 0.92
gi|219842266 usherin isoform B [Homo sapiens] 28 1.2
gi|14210534 keratin associated protein 4.4 [Homo sapiens] 28 1.2
gi|15082222 keratin associated protein 4-1 [Homo sapiens] 28 1.2
gi|126012573 low density lipoprotein-related protein 2 [Homo sap... 28 1.6
gi|15082228 keratin associated protein 4-2 [Homo sapiens] 28 1.6
gi|63053512 keratin associated protein 10-1 [Homo sapiens] 28 2.1
gi|169212028 PREDICTED: keratin-associated protein 9-2-like 2-li... 27 2.7
gi|239747556 PREDICTED: hypothetical protein XP_002347648 [Homo ... 27 2.7
gi|38490568 keratin associated protein 10-4 [Homo sapiens] 27 2.7
gi|13569940 keratin associated protein 1-3 [Homo sapiens] 27 2.7
gi|154146260 keratin associated protein 4-3 [Homo sapiens] 27 2.7
>gi|26024195 cornifelin [Homo sapiens]
Length = 112
Score = 253 bits (647), Expect = 2e-68
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 1 MSYPVTSQPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECC 60
MSYPVTSQPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECC
Sbjct: 1 MSYPVTSQPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECC 60
Query: 61 CAPYLPGGLHSIRTGMRERYHIQGSVGHDWAALTFCLPCALCQMARELKIRE 112
CAPYLPGGLHSIRTGMRERYHIQGSVGHDWAALTFCLPCALCQMARELKIRE
Sbjct: 61 CAPYLPGGLHSIRTGMRERYHIQGSVGHDWAALTFCLPCALCQMARELKIRE 112
>gi|71274180 PLAC8-like 1 [Homo sapiens]
Length = 177
Score = 102 bits (255), Expect = 5e-23
Identities = 43/88 (48%), Positives = 57/88 (64%)
Query: 24 WHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECCCAPYLPGGLHSIRTGMRERYHIQ 83
W TGL C D +C CG F P+CL C I+ +GEC C P LPG ++R G RER+ IQ
Sbjct: 72 WSTGLFSVCRDRRICFCGLFCPMCLECDIARHYGECLCWPLLPGSTFALRIGTRERHKIQ 131
Query: 84 GSVGHDWAALTFCLPCALCQMARELKIR 111
G++ DW A+ C ++CQ+ARELK+R
Sbjct: 132 GTLCEDWLAVHCCWAFSICQVARELKMR 159
>gi|195222740 placenta-specific 8 [Homo sapiens]
Length = 115
Score = 83.2 bits (204), Expect = 4e-17
Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 20 QLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECCCAPYLPGGLHSIRTGMRER 79
Q S+W TG+ DC +D VCLCGTF CL C+++ D ECC L G ++RT R R
Sbjct: 22 QNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNECC----LCGTSVAMRTLYRTR 77
Query: 80 YHIQGSVGHDWAALTFCLPCALCQMARELKIR 111
Y I GS+ D+ A C C LCQ+ R++ R
Sbjct: 78 YGIPGSICDDYMATLCCPHCTLCQIKRDINRR 109
>gi|195222737 placenta-specific 8 [Homo sapiens]
Length = 115
Score = 83.2 bits (204), Expect = 4e-17
Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 20 QLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECCCAPYLPGGLHSIRTGMRER 79
Q S+W TG+ DC +D VCLCGTF CL C+++ D ECC L G ++RT R R
Sbjct: 22 QNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNECC----LCGTSVAMRTLYRTR 77
Query: 80 YHIQGSVGHDWAALTFCLPCALCQMARELKIR 111
Y I GS+ D+ A C C LCQ+ R++ R
Sbjct: 78 YGIPGSICDDYMATLCCPHCTLCQIKRDINRR 109
>gi|7706158 placenta-specific 8 [Homo sapiens]
Length = 115
Score = 83.2 bits (204), Expect = 4e-17
Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 20 QLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECCCAPYLPGGLHSIRTGMRER 79
Q S+W TG+ DC +D VCLCGTF CL C+++ D ECC L G ++RT R R
Sbjct: 22 QNSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNECC----LCGTSVAMRTLYRTR 77
Query: 80 YHIQGSVGHDWAALTFCLPCALCQMARELKIR 111
Y I GS+ D+ A C C LCQ+ R++ R
Sbjct: 78 YGIPGSICDDYMATLCCPHCTLCQIKRDINRR 109
>gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 31.2 bits (69), Expect = 0.19
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 6 TSQPQCATTSCYQ-----TQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECC 60
T +P C+ ++CYQ + + +++CC PVC T +C +S C
Sbjct: 98 TCEPSCSVSNCYQPVCFEATICEPSCSVSNCC--QPVCFEATICE--PSCSVSSCAQPVC 153
Query: 61 CAP 63
C P
Sbjct: 154 CEP 156
>gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 30.8 bits (68), Expect = 0.24
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 6 TSQPQCATTSCYQ-----TQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECC 60
T +P C+ ++CYQ + + +++CC PVC T +C +S C
Sbjct: 98 TCEPSCSVSNCYQPVCFEATICEPSCSVSNCC--QPVCFEATVCE--PSCSVSSCAQPVC 153
Query: 61 CAP 63
C P
Sbjct: 154 CEP 156
>gi|239751310 PREDICTED: keratin associated protein 4-9 isoform 2
[Homo sapiens]
Length = 195
Score = 30.8 bits (68), Expect = 0.24
Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 9/65 (13%)
Query: 4 PVTSQPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCL--------ACRISDD 55
PV QP C SC +T ++ CC C+ P C CR S
Sbjct: 82 PVCCQPTCCRPSCCETTCCHPRCCISSCCRP-SCCVSSCCKPQCCQSVCCQPNCCRPSCS 140
Query: 56 FGECC 60
CC
Sbjct: 141 ISSCC 145
>gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1
[Homo sapiens]
Length = 210
Score = 30.8 bits (68), Expect = 0.24
Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 9/65 (13%)
Query: 4 PVTSQPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCL--------ACRISDD 55
PV QP C SC +T ++ CC C+ P C CR S
Sbjct: 97 PVCCQPTCCRPSCCETTCCHPRCCISSCCRP-SCCVSSCCKPQCCQSVCCQPNCCRPSCS 155
Query: 56 FGECC 60
CC
Sbjct: 156 ISSCC 160
Score = 28.1 bits (61), Expect = 1.6
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 9/60 (15%)
Query: 4 PVTSQPQCATTSCYQTQLSDWHTGLTDCCND---MPVCLCGTFAPLCLACRISDDFGECC 60
P S+P C T+C +T ++ CC PVC P C CR S CC
Sbjct: 62 PTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQPVCC----QPTC--CRPSCCETTCC 115
>gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo
sapiens]
Length = 517
Score = 30.8 bits (68), Expect = 0.24
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 6 TSQPQCATTSCYQ-----TQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECC 60
T +P C+ ++CYQ + + +++CC PVC T +C +S C
Sbjct: 98 TCEPSCSVSNCYQPVCFEATICEPSCSVSNCC--QPVCFEATVCE--PSCSVSSCAQPVC 153
Query: 61 CAP 63
C P
Sbjct: 154 CEP 156
>gi|63053517 keratin associated protein 10-5 [Homo sapiens]
Length = 271
Score = 30.0 bits (66), Expect = 0.41
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 7/56 (12%)
Query: 8 QPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECCCAP 63
QP C TTSC + S ++ C P+C P+ C + + CC P
Sbjct: 206 QPACCTTSCCRPSSS-----VSLLCR--PICRPACCVPISSCCAPASSYQASCCRP 254
>gi|118572608 keratin associated protein 4-5 [Homo sapiens]
Length = 181
Score = 30.0 bits (66), Expect = 0.41
Identities = 17/61 (27%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 4 PVTSQPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLC---LACRISDDFGECC 60
P +PQC + CYQ ++ CC C P C CR + CC
Sbjct: 38 PSCCKPQCCQSVCYQPTCCHPSCCISSCCRPY-CCESSCCRPCCCQTTCCRTTCCRTTCC 96
Query: 61 C 61
C
Sbjct: 97 C 97
>gi|239758032 PREDICTED: keratin associated protein 4-8 isoform 2
[Homo sapiens]
Length = 193
Score = 29.6 bits (65), Expect = 0.54
Identities = 18/67 (26%), Positives = 23/67 (34%), Gaps = 9/67 (13%)
Query: 2 SYPVTSQPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCL--------ACRIS 53
SY V +PQC + C Q ++ CC C+ P C CR S
Sbjct: 43 SYSVCCKPQCCQSVCCQPTCCHPSCCISSCCRP-SCCVSSCCKPQCCQSVCCQPNCCRPS 101
Query: 54 DDFGECC 60
CC
Sbjct: 102 CSISSCC 108
>gi|239756796 PREDICTED: similar to keratin associated protein 4-12
isoform 2 [Homo sapiens]
Length = 193
Score = 29.6 bits (65), Expect = 0.54
Identities = 18/67 (26%), Positives = 23/67 (34%), Gaps = 9/67 (13%)
Query: 2 SYPVTSQPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCL--------ACRIS 53
SY V +PQC + C Q ++ CC C+ P C CR S
Sbjct: 43 SYSVCCKPQCCQSVCCQPTCCHPSCCISSCCRP-SCCVSSCCKPQCCQSVCCQPNCCRPS 101
Query: 54 DDFGECC 60
CC
Sbjct: 102 CSISSCC 108
>gi|188528609 secreted frizzled-related protein 5 [Homo sapiens]
Length = 317
Score = 29.3 bits (64), Expect = 0.71
Identities = 30/99 (30%), Positives = 37/99 (37%), Gaps = 14/99 (14%)
Query: 20 QLSDWHTGLTDCCN-DMPVCLCGTFAPLCL-----ACRISDDFGECCCAPYL-------P 66
Q S W L C+ D V LC FAP+CL CR + CAP + P
Sbjct: 88 QASSWLPLLAKRCHSDTQVFLCSLFAPVCLDRPIYPCRSLCEAVRAGCAPLMEAYGFPWP 147
Query: 67 GGLHSIRTGMRERYHIQGSVGH-DWAALTFCLPCALCQM 104
LH + + I GH A CA C+M
Sbjct: 148 EMLHCHKFPLDNDLCIAVQFGHLPATAPPVTKICAQCEM 186
>gi|225690551 keratin associated protein 4-9 [Homo sapiens]
Length = 210
Score = 29.3 bits (64), Expect = 0.71
Identities = 17/65 (26%), Positives = 21/65 (32%), Gaps = 9/65 (13%)
Query: 4 PVTSQPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCL--------ACRISDD 55
P QP C SC +T ++ CC C+ P C CR S
Sbjct: 97 PACCQPTCCRPSCCETTCCHPRCCISSCCRP-SCCVSSCCKPQCCQSVCCQPNCCRPSCS 155
Query: 56 FGECC 60
CC
Sbjct: 156 ISSCC 160
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Query: 4 PVTSQPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECC 60
P S+P C T+C +T ++ CC C P C CR S CC
Sbjct: 62 PTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQ-CCQPACCQPTC--CRPSCCETTCC 115
>gi|5453555 ras-related nuclear protein [Homo sapiens]
Length = 216
Score = 28.9 bits (63), Expect = 0.92
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Query: 8 QPQCA------TTSCYQTQLSDWHTGLTDCCNDMPVCLCG 41
Q QCA T+ + +WH L C ++P+ LCG
Sbjct: 82 QAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG 121
>gi|154759249 keratin associated protein 10-11 [Homo sapiens]
Length = 298
Score = 28.9 bits (63), Expect = 0.92
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 7/56 (12%)
Query: 8 QPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECCCAP 63
QP C TTSC + S ++ C+ PVC P+ C + CC P
Sbjct: 222 QPACCTTSCCRPSSS-----VSLLCH--PVCRSTCCVPVSSCCAPTSSCQSSCCRP 270
>gi|38490571 keratin associated protein 10-7 [Homo sapiens]
Length = 370
Score = 28.9 bits (63), Expect = 0.92
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 18/54 (33%)
Query: 8 QPQCATTS-CYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECC 60
+P C T+S C Q CC +PVC P+C SDD G CC
Sbjct: 215 KPACCTSSPCQQA-----------CC--VPVCC----KPVCCVPTCSDDSGSCC 251
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Query: 8 QPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECCCAP 63
QP C TTSC + S ++ C PVC P+ C + CC P
Sbjct: 294 QPACCTTSCCRPSSS-----VSLLCR--PVCRPACCVPVPSCCAPTSSCQASCCRP 342
>gi|219842266 usherin isoform B [Homo sapiens]
Length = 5202
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 16 CYQTQLSDWHTGLTD-CCNDMPVCLCGTFAPLCLACRISDDFGECCC 61
C Q + G+ D CC MP G +C A R+ D G+ CC
Sbjct: 3251 CPDEQHNRVSVGIGDSCCGRMPYSTSGN--QICCAGRLHDGHGQKCC 3295
>gi|14210534 keratin associated protein 4.4 [Homo sapiens]
Length = 166
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Query: 4 PVTSQPQCATTSCYQTQLSDWHTGLTDCCNDM---PVCLCGTFAPLCLACRISDDFGECC 60
P +PQC T+C +T CC + P C C ++ + CR CC
Sbjct: 83 PTCCRPQCCQTTCCRTTCCRPSCCRPQCCQSVCCQPTCCCPSYC-VSSCCRPQCCQTTCC 141
>gi|15082222 keratin associated protein 4-1 [Homo sapiens]
Length = 127
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 15/67 (22%)
Query: 9 PQCATTSCYQTQLSDWHTGLTDCCND---MPVCL-------CGTFA---PLC--LACRIS 53
P C +SC + S T CC PVC CG + PLC CR S
Sbjct: 37 PSCVVSSCCRPSCSQTTCCQTTCCRPSCCRPVCCQTTCRPSCGVSSCCRPLCCQTTCRPS 96
Query: 54 DDFGECC 60
CC
Sbjct: 97 CGVSSCC 103
>gi|126012573 low density lipoprotein-related protein 2 [Homo
sapiens]
Length = 4655
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 7/64 (10%)
Query: 3 YPVTSQPQCATTSCYQT-QLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECCC 61
YP Q C +CY T Q DW D +++ +CL S GEC
Sbjct: 144 YPTCEQLTCDNGACYNTSQKCDWKVDCRDSSDEI------NCTEICLHNEFSCGNGECIP 197
Query: 62 APYL 65
Y+
Sbjct: 198 RAYV 201
>gi|15082228 keratin associated protein 4-2 [Homo sapiens]
Length = 136
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/56 (30%), Positives = 20/56 (35%), Gaps = 9/56 (16%)
Query: 8 QPQCATTSCYQTQLSDWHTGLTDCCND---MPVCLCGTFAPLCLACRISDDFGECC 60
+PQC + C Q G T CC P C T CR + G CC
Sbjct: 87 RPQCCQSVCCQPTCCRPSCGQTTCCRTTCYRPSCCVST------CCRPTCSSGSCC 136
Score = 27.3 bits (59), Expect = 2.7
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 14/64 (21%)
Query: 5 VTSQPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLC--------LACRISDDF 56
V QP C + SC QT T CC C+ F P C CR S
Sbjct: 54 VCCQPTCCSPSCCQTTCC-----RTTCCRP-SCCVSSCFRPQCCQSVCCQPTCCRPSCGQ 107
Query: 57 GECC 60
CC
Sbjct: 108 TTCC 111
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 15 SCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECC 60
SC + SD GL +CC P C C T CR S CC
Sbjct: 4 SCCGSVCSDQGCGLENCCR--PSC-CQTTCCRTTCCRPSCCVSSCC 46
>gi|63053512 keratin associated protein 10-1 [Homo sapiens]
Length = 282
Score = 27.7 bits (60), Expect = 2.1
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Query: 8 QPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECCCAP 63
QP C TTSC + S ++ C PVC P+ C + CC P
Sbjct: 217 QPACCTTSCCRPSSS-----VSLLCR--PVCRPACCMPVSSCCAPASSCQASCCRP 265
>gi|169212028 PREDICTED: keratin-associated protein 9-2-like 2-like
[Homo sapiens]
Length = 160
Score = 27.3 bits (59), Expect = 2.7
Identities = 21/71 (29%), Positives = 25/71 (35%), Gaps = 12/71 (16%)
Query: 8 QPQCATTSCYQ-TQLSDWHTGLTDC---CNDMPVC-------LCGTFAPLCLACRISDDF 56
QP C +T CYQ G T C C C C +CL ++
Sbjct: 77 QPSCCSTPCYQPICCGSSCCGQTSCGSSCGQSSSCAPVYCRRTCYHPTTVCLPGCLNQSC 136
Query: 57 GECCCAP-YLP 66
G CC P Y P
Sbjct: 137 GSSCCQPCYCP 147
>gi|239747556 PREDICTED: hypothetical protein XP_002347648 [Homo
sapiens]
Length = 485
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 12/69 (17%)
Query: 25 HTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGEC---------CCAPYLPGGLH---SI 72
H + C D P LC F ++ + D C C + PG H S+
Sbjct: 280 HRACSSCPRDSPSTLCSAFGAGLVSASRAWDPPSCSHENHLWGRACHQWDPGPRHFHRSL 339
Query: 73 RTGMRERYH 81
R+G E++H
Sbjct: 340 RSGSSEKHH 348
>gi|38490568 keratin associated protein 10-4 [Homo sapiens]
Length = 401
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Query: 8 QPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGECCCAP 63
QP C TTSC + S ++ C PVC P+ C + CC P
Sbjct: 346 QPACCTTSCCRPSSS-----VSLLCR--PVCRPACCVPVPSCCAPTSSCQPSCCRP 394
>gi|13569940 keratin associated protein 1-3 [Homo sapiens]
Length = 167
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/50 (28%), Positives = 15/50 (30%), Gaps = 8/50 (16%)
Query: 6 TSQPQCATTSCYQTQLSDWHTGLTDCCND--------MPVCLCGTFAPLC 47
T P C SC H CC PVC C + P C
Sbjct: 118 TCLPPCCVVSCTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSCEPTC 167
>gi|154146260 keratin associated protein 4-3 [Homo sapiens]
Length = 195
Score = 27.3 bits (59), Expect = 2.7
Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 8 QPQCATTSCYQTQLSDWHTGLTDCCNDMPVCLCGTFAPLC---LACRISDDFGECC 60
+P C T+C +T ++ CC C+ P C CR S CC
Sbjct: 26 RPSCCQTTCCRTTCCRPSCCISSCCRP-SCCISSCCKPSCCRTTCCRPSCCISSCC 80
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.139 0.506
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,895,518
Number of Sequences: 37866
Number of extensions: 216191
Number of successful extensions: 644
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 570
Number of HSP's gapped (non-prelim): 107
length of query: 112
length of database: 18,247,518
effective HSP length: 82
effective length of query: 30
effective length of database: 15,142,506
effective search space: 454275180
effective search space used: 454275180
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.