Guide to the Human Genome
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Name: SFRP5 Sequence: fasta or formatted (317aa) NCBI GI: 188528609
Description:

secreted frizzled-related protein 5

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         32           4
 C cysteine            5.4         17           1
 D aspartate           4.4         14           1
 E glutamate           5.0         16           2
 F phenylalanine       3.8         12           2
 G glycine             6.3         20           3
 H histidine           3.5         11           1
 I isoleucine          2.5          8           1
 K lysine              7.9         25           4
 L leucine            12.3         39           3
 M methionine          4.1         13           1
 N asparagine          1.6          5           1
 P proline             7.9         25           2
 Q glutamine           3.5         11           2
 R arginine            5.0         16           1
 S serine              4.7         15           2
 T threonine           1.9          6           1
 V valine              4.7         15           2
 W tryptophan          1.6          5           1
 Y tyrosine            3.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   secreted frizzled-related protein 5 
SFRP1                 0.512   secreted frizzled-related protein 1 
SFRP2                 0.330   secreted frizzled-related protein 2 precursor 
FZD7                  0.132   frizzled 7 
FZD9                  0.127   frizzled 9 
FZD5                  0.124   frizzled 5 precursor 
FZD10                 0.124   frizzled 10 
FZD1                  0.121   frizzled 1 
FZD8                  0.121   frizzled 8 
FZD2                  0.119   frizzled 2 
FZD4                  0.115   frizzled 4 
FRZB                  0.110   frizzled-related protein 
FZD3                  0.090   frizzled 3 
SFRP4                 0.085   secreted frizzled-related  protein 4 
FZD6                  0.077   frizzled 6 
CPZ                   0.065   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.063   carboxypeptidase Z isoform 1 
COL18A1               0.060   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
CORIN                 0.056   corin 
MFRP                  0.043   membrane frizzled-related protein 
SMO                   0.029   smoothened 
WFIKKN1               0.019   WAP, follistatin/kazal, immunoglobulin, kunitz and n...
WFIKKN2               0.012   WFIKKN2 protein 
ADAMTSL4              0.009   thrombospondin repeat containing 1 isoform 1 
BIRC6                 0.009   baculoviral IAP repeat-containing 6 
ADAMTSL4              0.009   thrombospondin repeat containing 1 isoform 2 
CFB                   0.009   complement factor B preproprotein 
METT11D1              0.008   methyltransferase 11 domain containing 1 isoform 2 [...
METT11D1              0.008   methyltransferase 11 domain containing 1 isoform 1 [...
ANKRD13B              0.008   ankyrin repeat domain 13B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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