Guide to the Human Genome
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Name: KRTAP4-1 Sequence: fasta or formatted (127aa) NCBI GI: 15082222
Description:

keratin associated protein 4-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           33.9         43           3
 D aspartate           1.6          2           1
 E glutamate           0.8          1           1
 F phenylalanine       0.0          0           0
 G glycine             4.7          6           1
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             2.4          3           1
 M methionine          0.8          1           1
 N asparagine          0.8          1           1
 P proline             7.9         10           1
 Q glutamine           7.1          9           1
 R arginine            7.9         10           1
 S serine             15.0         19           2
 T threonine          11.8         15           2
 V valine              5.5          7           2
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 4-1 
KRTAP4-9              0.686   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-12             0.683   keratin associated protein 4-12 
KRTAP4-3              0.679   keratin associated protein 4-3 
KRTAP4-9              0.676   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.676   keratin associated protein 4-9 
KRTAP4-11             0.655   keratin associated protein 4-11 
KRTAP4-4              0.641   keratin associated protein 4.4 
KRTAP4-8              0.638   PREDICTED: keratin associated protein 4-8 isoform 3...
KRTAP4-8              0.638   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.638   PREDICTED: similar to keratin associated protein 4-...
LOC100134267          0.638   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.634   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.631   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.631   keratin associated protein 4.8 
KRTAP4-2              0.628   keratin associated protein 4-2 
KRTAP4-7              0.628   keratin associated protein 4-7 
KRTAP4-7              0.628   PREDICTED: keratin associated protein 4-7 
KRTAP4-8              0.586   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.586   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-5              0.507   keratin associated protein 4-5 
LOC728318             0.486   PREDICTED: hypothetical protein 
LOC728318             0.486   PREDICTED: hypothetical protein 
LOC728318             0.486   PREDICTED: hypothetical protein 
KRTAP9-2              0.445   keratin associated protein 9.2 
KRTAP9-9              0.441   keratin associated protein 9-9 
LOC728341             0.414   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP9-3              0.414   keratin associated protein 9.3 
LOC732428             0.410   PREDICTED: keratin-associated protein 9-2-like 2-li...
KRTAP9-8              0.410   keratin associated protein 9.8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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