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Search of human proteins with 24797108
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24797108 calcium-binding tyrosine phosphorylation-regulated
protein isoform a [Homo sapiens]
(493 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24797108 calcium-binding tyrosine phosphorylation-regulated p... 958 0.0
gi|24797114 calcium-binding tyrosine phosphorylation-regulated p... 910 0.0
gi|24797118 calcium-binding tyrosine phosphorylation-regulated p... 364 e-101
gi|24797116 calcium-binding tyrosine phosphorylation-regulated p... 363 e-100
gi|24797112 calcium-binding tyrosine phosphorylation-regulated p... 363 e-100
gi|24797110 calcium-binding tyrosine phosphorylation-regulated p... 169 4e-42
gi|91982772 mucin 17 [Homo sapiens] 59 1e-08
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 48 2e-05
gi|8394343 sperm autoantigenic protein 17 [Homo sapiens] 46 7e-05
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 43 7e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 42 0.001
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ... 42 0.002
gi|19923559 EMSY protein [Homo sapiens] 40 0.005
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 40 0.006
gi|110349719 titin isoform N2-A [Homo sapiens] 39 0.011
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 39 0.011
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 39 0.011
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 39 0.011
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 39 0.011
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 39 0.011
gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo sap... 39 0.011
gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo sap... 39 0.011
gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo sapi... 39 0.011
gi|148613886 regulatory factor X domain containing 2 [Homo sapiens] 39 0.014
gi|33350928 disabled homolog 1 [Homo sapiens] 38 0.018
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 38 0.018
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 38 0.018
gi|237681125 breast cancer 1, early onset isoform 5 [Homo sapiens] 38 0.024
gi|237681123 breast cancer 1, early onset isoform 4 [Homo sapiens] 38 0.024
gi|11641239 hypothetical protein LOC53838 [Homo sapiens] 38 0.024
>gi|24797108 calcium-binding tyrosine phosphorylation-regulated
protein isoform a [Homo sapiens]
Length = 493
Score = 958 bits (2476), Expect = 0.0
Identities = 493/493 (100%), Positives = 493/493 (100%)
Query: 1 MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK 60
MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK
Sbjct: 1 MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK 60
Query: 61 QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT 120
QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT
Sbjct: 61 QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT 120
Query: 121 QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML 180
QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML
Sbjct: 121 QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML 180
Query: 181 GKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTS 240
GKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTS
Sbjct: 181 GKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTS 240
Query: 241 VHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDV 300
VHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDV
Sbjct: 241 VHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDV 300
Query: 301 PVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSV 360
PVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSV
Sbjct: 301 PVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSV 360
Query: 361 ESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGAIKIGSEKSLHLE 420
ESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGAIKIGSEKSLHLE
Sbjct: 361 ESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGAIKIGSEKSLHLE 420
Query: 421 VEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLT 480
VEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLT
Sbjct: 421 VEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLT 480
Query: 481 APEIEPEGESTAE 493
APEIEPEGESTAE
Sbjct: 481 APEIEPEGESTAE 493
>gi|24797114 calcium-binding tyrosine phosphorylation-regulated
protein isoform b [Homo sapiens]
Length = 475
Score = 910 bits (2353), Expect = 0.0
Identities = 475/493 (96%), Positives = 475/493 (96%), Gaps = 18/493 (3%)
Query: 1 MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK 60
MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYR
Sbjct: 1 MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYR------------ 48
Query: 61 QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT 120
VEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT
Sbjct: 49 ------VEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT 102
Query: 121 QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML 180
QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML
Sbjct: 103 QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML 162
Query: 181 GKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTS 240
GKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTS
Sbjct: 163 GKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTS 222
Query: 241 VHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDV 300
VHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDV
Sbjct: 223 VHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDV 282
Query: 301 PVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSV 360
PVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSV
Sbjct: 283 PVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSV 342
Query: 361 ESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGAIKIGSEKSLHLE 420
ESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGAIKIGSEKSLHLE
Sbjct: 343 ESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGAIKIGSEKSLHLE 402
Query: 421 VEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLT 480
VEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLT
Sbjct: 403 VEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLT 462
Query: 481 APEIEPEGESTAE 493
APEIEPEGESTAE
Sbjct: 463 APEIEPEGESTAE 475
>gi|24797118 calcium-binding tyrosine phosphorylation-regulated
protein isoform e [Homo sapiens]
Length = 221
Score = 364 bits (935), Expect = e-101
Identities = 183/192 (95%), Positives = 184/192 (95%)
Query: 1 MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK 60
MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK
Sbjct: 1 MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK 60
Query: 61 QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT 120
QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT
Sbjct: 61 QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT 120
Query: 121 QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML 180
QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML
Sbjct: 121 QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML 180
Query: 181 GKVSSIHSDQSD 192
V+ S D
Sbjct: 181 EDVAKKSSGSGD 192
>gi|24797116 calcium-binding tyrosine phosphorylation-regulated
protein isoform c [Homo sapiens]
Length = 379
Score = 363 bits (932), Expect = e-100
Identities = 181/185 (97%), Positives = 182/185 (98%)
Query: 1 MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK 60
MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK
Sbjct: 1 MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK 60
Query: 61 QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT 120
QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT
Sbjct: 61 QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT 120
Query: 121 QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML 180
QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML
Sbjct: 121 QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML 180
Query: 181 GKVSS 185
+S
Sbjct: 181 AMATS 185
>gi|24797112 calcium-binding tyrosine phosphorylation-regulated
protein isoform c [Homo sapiens]
Length = 379
Score = 363 bits (932), Expect = e-100
Identities = 181/185 (97%), Positives = 182/185 (98%)
Query: 1 MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK 60
MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK
Sbjct: 1 MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVK 60
Query: 61 QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT 120
QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT
Sbjct: 61 QFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTT 120
Query: 121 QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML 180
QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML
Sbjct: 121 QFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQML 180
Query: 181 GKVSS 185
+S
Sbjct: 181 AMATS 185
>gi|24797110 calcium-binding tyrosine phosphorylation-regulated
protein isoform d [Homo sapiens]
Length = 281
Score = 169 bits (429), Expect = 4e-42
Identities = 83/87 (95%), Positives = 84/87 (96%)
Query: 99 MEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPP 158
MEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPP
Sbjct: 1 MEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPP 60
Query: 159 TAVSPEFAYVPADPAQLAAQMLGKVSS 185
TAVSPEFAYVPADPAQLAAQML +S
Sbjct: 61 TAVSPEFAYVPADPAQLAAQMLAMATS 87
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 58.5 bits (140), Expect = 1e-08
Identities = 115/470 (24%), Positives = 168/470 (35%), Gaps = 91/470 (19%)
Query: 76 PQKKLECLKEPGKTSVESKVPTQMEKSTDT----DEDNVTRTEYSDKTTQFPSVYAVPGT 131
P+ L C P TS+ES V + + T E T SD TT FPS T
Sbjct: 79 PRMYLSCSTNPEMTSIESSVTSDTPGVSSTRMTPTESRTTSESTSDSTTLFPS-----ST 133
Query: 132 EQTEAVGGLSSKPATPK-TTTPPSSPPPTAVSPEFAYVPADPA---QLAAQMLGKV---- 183
E T S P TP+ T P S+P ++S A+V P + + KV
Sbjct: 134 EDT-------SSPTTPEGTDVPMSTPSEESISSTMAFVSTAPLPSFEAYTSLTYKVDMST 186
Query: 184 ---------SSIHSDQSDVLMVDV-------ATSMPVVIKEVPSSEAAEDVMVAAPLVCS 227
SS + +S + TSMP +V SSEA ++ P
Sbjct: 187 PLTTSTQASSSPTTPESTTIPKSTNSEGSTPLTSMPASTMKVASSEAI--TLLTTP---- 240
Query: 228 GKVLEVQVVNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEV 287
V++ ++ S P E PS ++S P P V L E
Sbjct: 241 -----VEISTPVTISAQASSSPTTAEG-PSLSNSAP--SGGSTPLTRMPLSVMLVVSSEA 292
Query: 288 MSTVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSV 347
ST+ + ++PV E P T + + + + E +P S
Sbjct: 293 -STLSTTPAATNIPVITST-------EASSSPTTAEGTSIPTSTYT-EGSTPLTSTPAST 343
Query: 348 VEKTTSGMSKKSVESVKLAQL-EENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAE 406
+ TS MS S+ V + L + + SS+ AEAT++L+ T +G P +
Sbjct: 344 MPVATSEMSTLSITPVDTSTLVTTSTEPSSLPTTAEATSMLTSTLSEG--STPLTNMPVS 401
Query: 407 GAIKIGSEKSLHLEVEITSIV----------SDNTGQEESGENSVPQE---------MEG 447
+ SE S + + S S T ++ S S P E +
Sbjct: 402 TILVASSEASTTSTIPVDSKTFVTTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVST 461
Query: 448 KPVLSGEAAE----AVHSGTSVKSS--SGPFPPAPEGLTAPEIEPEGEST 491
PV S EA+ V S T V +S + PP E + P P ST
Sbjct: 462 TPVASSEASNLSTTPVDSKTQVTTSTEASSSPPTAEVNSMPTSTPSEGST 511
Score = 43.1 bits (100), Expect = 6e-04
Identities = 89/462 (19%), Positives = 160/462 (34%), Gaps = 86/462 (18%)
Query: 71 SEGTTPQKKLEC---LKEPGKTSVESKVPTQME-----------KSTDTDEDNVTRTEYS 116
SEG+TP ++ + +TS S P ST D ++ + YS
Sbjct: 1038 SEGSTPLTRMPVSTTMVASSETSTLSTTPADTSTPVTTYSQASSSSTTADGTSMPTSTYS 1097
Query: 117 DKTTQFPSV---------------------YAVPGTEQTEAVGGLSSKPATPKTTTPPSS 155
+ +T SV ++P T TEA SS P T + T+ P+S
Sbjct: 1098 EGSTPLTSVPVSTRLVVSSEASTLSTTPVDTSIPVTTSTEA----SSSPTTAEGTSIPTS 1153
Query: 156 PPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAA 215
PP +P A +P + + +S+ D + S P EV S +
Sbjct: 1154 PPSEGTTP-LASMPVSTTLVVSSEANTLSTTPVDSKTQVATSTEASSPPPTAEVTSMPTS 1212
Query: 216 EDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQ 275
+ PL + H + S + +S P+ E
Sbjct: 1213 TPGERSTPL-----------TSMPVRHTPVASSEASTLSTSPVDTSTPVTTSAET---SS 1258
Query: 276 APEVTLQADIEVMSTVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKE 335
+P + +T S++ +PV+ +V + + P + + NE S
Sbjct: 1259 SPTTAEGTSLPTSTTSEGSTLLTSIPVSTTLVTSPEASTLLTTPVDTKGPVVTSNEVS-- 1316
Query: 336 NEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQ 395
SP + + + +T + + S+ + ++ + + A ++LS T +
Sbjct: 1317 --SSPTPAEGTSMPTSTYSEGRTPLTSIPV---------NTTLVASSAISILSTTPVDNS 1365
Query: 396 PEVPAQLLDAEGAIKIGSEKSLHLEVEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEA 455
V S E TS+ + N + + S+P + PV+S EA
Sbjct: 1366 TPVTTST----------EACSSPTTSEGTSMPNSNPSEGTTPLTSIP--VSTTPVVSSEA 1413
Query: 456 ----AEAVHSGT--SVKSSSGPFPPAPEGLTAPEIEP-EGES 490
A V + T + + + P EG++ P P EG++
Sbjct: 1414 STLSATPVDTSTPGTTSAEATSSPTTAEGISIPTSTPSEGKT 1455
Score = 41.6 bits (96), Expect = 0.002
Identities = 107/439 (24%), Positives = 157/439 (35%), Gaps = 85/439 (19%)
Query: 72 EGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGT 131
EG+TP L + + V S+ T DT T TE + T ++P +
Sbjct: 921 EGSTP---LTSMPDSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGT-SIPTS 976
Query: 132 EQTEAVGGLSSKPA---------------------TPKTT-TPPSSPPPTAVSPEFAYVP 169
+E L+S P TP TT T SSPPPTA E +P
Sbjct: 977 TPSEGTTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLTTSTEASSPPPTA---EGTSMP 1033
Query: 170 ADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGK 229
+S S+ S L T MPV V SSE + + P S
Sbjct: 1034 --------------TSTPSEGSTPL-----TRMPVSTTMVASSETS--TLSTTPADTSTP 1072
Query: 230 VLEVQVVNQTSVHVDLGSQPKENEAEPST-ASSVPLQDEQEPPAYDQAPEVTLQADIEVM 288
V + +S D S P +E ST +SVP+ + + + ++ +
Sbjct: 1073 VTTYSQASSSSTTADGTSMPTSTYSEGSTPLTSVPV-----------STRLVVSSEASTL 1121
Query: 289 STVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENE--QSPRVSPKS 346
ST + + +PVT E P T + + + S+ S VS
Sbjct: 1122 STTPVDT---SIPVTTST-------EASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTL 1171
Query: 347 VVEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAE 406
VV + +S V+S Q+ + + SS AE T++ TS G+ P +
Sbjct: 1172 VVSSEANTLSTTPVDS--KTQVATSTEASSPPPTAEVTSM--PTSTPGERSTPLTSMPVR 1227
Query: 407 GAIKIGSEKSLHLEVEITSIVSDNTGQEESGE-NSVPQEMEGKPVLSGEAAEAVHSGTSV 465
SE S TS V +T S E +S P EG + + +E TS+
Sbjct: 1228 HTPVASSEAS----TLSTSPVDTSTPVTTSAETSSSPTTAEGTSLPTSTTSEGSTLLTSI 1283
Query: 466 KSSSG--PFPPAPEGLTAP 482
S+ P A LT P
Sbjct: 1284 PVSTTLVTSPEASTLLTTP 1302
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/255 (23%), Positives = 90/255 (35%), Gaps = 57/255 (22%)
Query: 16 TLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVKQFHQIKVEKWSEGTT 75
T++ + L T P++ + Y Q G++ D + +SEG+T
Sbjct: 2348 TMVASFETSTLSTTPADTSTPVTTYSQA-----GSSPTTADDT-----SMPTSTYSEGST 2397
Query: 76 PQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTE 135
P + P V S+ T DT + P T TE
Sbjct: 2398 PLTSVPVSTMP---VVSSEASTHSTTPVDT---------------------STPVTTSTE 2433
Query: 136 AVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLM 195
A SS P T + T+ P+SPP +P A +P + + G +S+
Sbjct: 2434 A----SSSPTTAEGTSIPTSPPSEGTTP-LASMPVSTTPVVSSEAGTLST--------TP 2480
Query: 196 VDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAE 255
VD +T M + S AED++V G L TS+ V S E
Sbjct: 2481 VDTSTPMTTSTEASSSPTTAEDIVVPISTASEGSTL------LTSIPV---STTPVASPE 2531
Query: 256 PSTASSVPLQDEQEP 270
ST S+ P+ D P
Sbjct: 2532 ASTLSTTPV-DSNSP 2545
Score = 40.0 bits (92), Expect = 0.005
Identities = 80/364 (21%), Positives = 131/364 (35%), Gaps = 47/364 (12%)
Query: 127 AVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSI 186
++P T TEA SS P T + T+ P+S P +P +P + +A+ G +S+
Sbjct: 2779 SIPVTTSTEA----SSSPTTAEVTSMPTSTPSETSTP-LTSMPVNHTPVASSEAGTLST- 2832
Query: 187 HSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLG 246
VD +T + K S AE ++V G L + T+ +
Sbjct: 2833 -------TPVDTSTPVTTSTKASSSPTTAEGIVVPISTASEGSTLLTSIPVSTT---PVA 2882
Query: 247 SQPKENEAEPSTASSVPLQDEQE---PPAYDQAPEVTLQADIEVMSTVHISSVYNDVPVT 303
S + +S+P+ E P + + + EV ST S + + VPV
Sbjct: 2883 SSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPISTPSEV-STPLTSILVSTVPVA 2941
Query: 304 -EGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSVES 362
+ P P T S E SP + + + +T G + + S
Sbjct: 2942 GSEASTLSTTPVDTRTPVT----------TSAEASSSPTTAEGTSMPISTPGERRTPLTS 2991
Query: 363 VKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGA---IKIGSEKSLHL 419
+ ++ + + +S A + T + E + AEG I SE S
Sbjct: 2992 MSVSTMPVASSEASTLSRTPAD---TSTPVTTSTEASSSPTTAEGTGIPISTPSEGS--- 3045
Query: 420 EVEITSIVSDNTG---QEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAP 476
+TSI T E S ++ P + V S E + S T + +S P
Sbjct: 3046 -TPLTSIPVSTTPVAIPEASTLSTTPVDSNSPVVTSTEVSS---SPTPAEGTSMPISTYS 3101
Query: 477 EGLT 480
EG T
Sbjct: 3102 EGST 3105
Score = 34.7 bits (78), Expect = 0.20
Identities = 86/405 (21%), Positives = 140/405 (34%), Gaps = 66/405 (16%)
Query: 70 WSEGTTPQKKLECLKEPGKTS--VESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYA 127
+SEG+TP + P T+ V S+ T DT T TE S T
Sbjct: 1980 YSEGSTPLTSM-----PLSTTLVVSSEASTLSTTPVDTSTPATTSTEGSSSPT------- 2027
Query: 128 VPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTA----VSPEFAYVPADPAQLAAQMLGKV 183
GG S + +TP T P + P + VS E + P Q+
Sbjct: 2028 --------TAGGTSIQTSTPSERTTPLAGMPVSTTLVVSSEGNTLSTTPVDSKTQVTNST 2079
Query: 184 SSIHSDQSDVLMVDVA---------TSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQ 234
+ S ++ + ++ TS+P+ V S EA+ + P+ + V+
Sbjct: 2080 EASSSATAEGSSMTISAPSEGSPLLTSIPLSTTPVASPEAS--TLSTTPVDSNSPVI--- 2134
Query: 235 VVNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHIS 294
TS V P E T+ ++ P T+ A +ST+ +
Sbjct: 2135 ----TSTEVSSSPIPTE-----GTSMQTSTYSDRRTPLTSMPVSTTVVAS-SAISTLSTT 2184
Query: 295 SVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENE--QSPRVSPKSVVEKTT 352
V PVT E P T + + + S+ + S VS VV
Sbjct: 2185 PVDTSTPVTNST-------EARSSPTTSEGTSMPTSTPSEGSTPFTSMPVSTMPVVTSEA 2237
Query: 353 SGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGAIKIG 412
S +S V++ + + + +S AE T++ + T +G P + +
Sbjct: 2238 STLSATPVDT--STPVTTSTEATSSPTTAEGTSIPTSTLSEG--TTPLTSIPVSHTLVAN 2293
Query: 413 SEKSLHLEVEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAE 457
SE S + S T E S S P EG + + ++E
Sbjct: 2294 SEVSTLSTTPVDSNTPFTTSTEAS---SPPPTAEGTSMPTSTSSE 2335
Score = 34.7 bits (78), Expect = 0.20
Identities = 91/419 (21%), Positives = 145/419 (34%), Gaps = 56/419 (13%)
Query: 86 PGKTSVESKVP-TQMEKSTD---TDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLS 141
P T E P T M ST + ED+ D +T P T TEA
Sbjct: 3155 PTSTPSEGSTPLTYMPVSTMLVVSSEDSTLSATPVDTST--------PVTTSTEA----- 3201
Query: 142 SKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATS 201
+ T + T+ P+S P ++P VP +A+ +S+ D + L S
Sbjct: 3202 TSSTTAEGTSIPTSTPSEGMTP-LTSVPVSNTPVASSEASILSTTPVDSNTPLTTSTEAS 3260
Query: 202 MPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAEPST--- 258
E S + + PL ++TS L + P + +T
Sbjct: 3261 SSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETST---LSTTPADTSTPVTTYSQ 3317
Query: 259 -ASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDVPVT--EGVVYIEQLPEQ 315
+SS P+ D P + T ++ +T +SS + + T + + E
Sbjct: 3318 ASSSPPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSEASTLSTTPVDTSTPVTTSTEA 3377
Query: 316 IVIPFTDQVACLKENEQSKENE--QSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEENAK 373
+ P T + + + S+ S VS VV + +S V+S L A
Sbjct: 3378 SLSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEAS 3437
Query: 374 YSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGAIKIGSEKS------LHLEVEITSIV 427
S AE T+L + T+ +G P ++ SE S + +T+
Sbjct: 3438 SSPTI--AEGTSLPTSTTSEG--STPLSIMPLSTTPVASSEASTLSTTPVDTSTPVTTSS 3493
Query: 428 SDNTGQEESGENSVPQEMEGK-------------PVLSGEAA----EAVHSGTSVKSSS 469
N+ + S+P G+ PV S EA+ V S T V SSS
Sbjct: 3494 PTNSSPTTAEVTSMPTSTAGEGSTPLTNMPVSTTPVASSEASTLSTTPVDSNTFVTSSS 3552
Score = 34.7 bits (78), Expect = 0.20
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 93 SKVPTQMEKSTDTDEDNVT----RTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPK 148
S PT ST + + VT RT+ S +TT FP+V T +S P P+
Sbjct: 4072 STPPTTSASSTTVNPEAVTTMTTRTKPSTRTTSFPTVTTTAVPTNTTIKSNPTSTPTVPR 4131
Query: 149 TTT 151
TTT
Sbjct: 4132 TTT 4134
Score = 34.3 bits (77), Expect = 0.27
Identities = 96/427 (22%), Positives = 145/427 (33%), Gaps = 60/427 (14%)
Query: 89 TSVESKVP----TQMEKSTDTDEDNV----TRTEYSDKTTQFPSVYAVPGTEQTEAVGGL 140
T V+S P T+ S+ T E T TE S T P + + + +
Sbjct: 652 TPVDSNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLTSMPVNTTLVASSEASTLSTT 711
Query: 141 SSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVAT 200
+TP TT+ +S PT AD A + +S S+ S L T
Sbjct: 712 PVDTSTPVTTSTEASSSPTT---------ADGASMP-------TSTPSEGSTPL-----T 750
Query: 201 SMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAEPS--- 257
SMPV + SSEA+ + PL S + + + + S P +E S
Sbjct: 751 SMPVSKTLLTSSEAS--TLSTTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLL 808
Query: 258 TASSVPLQDEQEPPA-------YDQAPEVTLQADIEVMSTVHISSVYNDVPVTEGVVYIE 310
T+ V + P A D VT ++ T + +EG +
Sbjct: 809 TSIPVSITPVTSPEASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTSTYSEGRTPLT 868
Query: 311 QLPEQIVIPFTDQVACLK----ENEQSKENEQSPRVSPKSVVEKTTSGMSKKSVESVKLA 366
+P + T ++ L + N R SP + E T+ S S L
Sbjct: 869 SMPVSTTLVATSAISTLSTTPVDTSTPVTNSTEARSSP-TTSEGTSMPTSTPGEGSTPLT 927
Query: 367 QLEENAK--YSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGAIKIGSEKSLHLEVEIT 424
+ ++ SS AT + + T + E + AEG S S E T
Sbjct: 928 SMPDSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTPS-----EGT 982
Query: 425 SIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLTAPEI 484
+ ++ NS + PV S TS ++SS PP EG + P
Sbjct: 983 TPLTSTPVSHTLVANSEASTLSTTPVDSNTPLT-----TSTEASSP--PPTAEGTSMPTS 1035
Query: 485 EPEGEST 491
P ST
Sbjct: 1036 TPSEGST 1042
Score = 34.3 bits (77), Expect = 0.27
Identities = 74/355 (20%), Positives = 124/355 (34%), Gaps = 44/355 (12%)
Query: 71 SEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPG 130
SEGTTP + P V S+V T D++ T TE S T ++P
Sbjct: 3395 SEGTTPLASMPVSTTP---VVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGT-SLPT 3450
Query: 131 TEQTEAVGGLSSKP---------------ATP-KTTTPPSSPPPTAVSPEFAYVPADPAQ 174
+ +E LS P TP T+TP ++ PT SP A V + P
Sbjct: 3451 STTSEGSTPLSIMPLSTTPVASSEASTLSTTPVDTSTPVTTSSPTNSSPTTAEVTSMPTS 3510
Query: 175 LAAQ-------MLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCS 227
A + M + + S ++ L S V +S + + V + +
Sbjct: 3511 TAGEGSTPLTNMPVSTTPVASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMST 3570
Query: 228 ----GKVLEVQVVNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQA 283
L +++ T V S P + PS S P+ + + PEV
Sbjct: 3571 PSEGSSSLTTMLLSSTYVTSSEASTP----STPSVDRSTPVTTSTQSNSTPTPPEV---I 3623
Query: 284 DIEVMSTVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSK-----ENEQ 338
+ + + +S+ +PV+ V I + +P + + S E
Sbjct: 3624 TLPMSTPSEVSTPLTIMPVSTTSVTISEAGTASTLPVDTSTPVITSTQVSSSPVTPEGTT 3683
Query: 339 SPRVSP-KSVVEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSL 392
P +P + TT +S V S + + L + +S + A+ S +L
Sbjct: 3684 MPIWTPSEGSTPLTTMPVSTTRVTSSEGSTLSTPSVVTSTPVTTSTEAISSSATL 3738
Score = 31.6 bits (70), Expect = 1.7
Identities = 94/448 (20%), Positives = 152/448 (33%), Gaps = 66/448 (14%)
Query: 70 WSEGTTPQKKLECLKEP---------GKTSVESKVPTQMEKST--------DTDEDNVTR 112
+SEG+TP + + +P T V++ +P T DT T
Sbjct: 2569 YSEGSTPLRSMPVSTKPLASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDTSMPISTP 2628
Query: 113 TEYSDKTTQF-----PSVYAVPGTEQTEAVG---------GLSSKPATPKTTTPPSSPPP 158
+E S T P + T T V G SS P T + ++ P+S P
Sbjct: 2629 SEVSTSLTSILVSTMPVASSEASTLSTTPVDTRTLVTTSTGTSSSPTTAEGSSMPTSTPG 2688
Query: 159 TAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSE--AAE 216
+P L ++ +S+ S + V TS PV SS AE
Sbjct: 2689 ERSTP-----------LTNILVSTTLLANSEASTLSTTPVDTSTPVTTSAEASSSPTTAE 2737
Query: 217 DVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQA 276
+ G ++ T + + S + + +S+P+ E +
Sbjct: 2738 GTSMRISTPSDGSTPLTSILVST---LPVASSEASTVSTTAVDTSIPVTTSTEASSSPTT 2794
Query: 277 PEVTLQ--ADIEVMSTVHISSVYNDVPVTEGVV-YIEQLPEQIVIPFTDQVACLKENEQS 333
EVT + ST S N PV + P P T S
Sbjct: 2795 AEVTSMPTSTPSETSTPLTSMPVNHTPVASSEAGTLSTTPVDTSTPVT----------TS 2844
Query: 334 KENEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLE-ENAKYSSVYMEAEATALLSDTSL 392
+ SP + VV +T+ + S+ ++ +++ S++ T++ TS
Sbjct: 2845 TKASSSPTTAEGIVVPISTASEGSTLLTSIPVSTTPVASSEASTLSTTPVDTSIPVTTST 2904
Query: 393 KGQPEVPAQLLDAEGAIKIGSEKSLHLEVEITSIVSDNTGQEESGENSVPQEMEGKPVLS 452
+G P I SE S L + S V G E S ++ P + PV +
Sbjct: 2905 EGSSS-PTTAEGTSMPISTPSEVSTPLTSILVSTV-PVAGSEASTLSTTPVDTR-TPVTT 2961
Query: 453 GEAAEAVHSGTSVKSSSGPFPPAPEGLT 480
+AEA S T+ + +S P E T
Sbjct: 2962 --SAEASSSPTTAEGTSMPISTPGERRT 2987
Score = 30.8 bits (68), Expect = 2.9
Identities = 93/426 (21%), Positives = 148/426 (34%), Gaps = 63/426 (14%)
Query: 71 SEGTTPQKKLECLKEPGKTSVESKVP-TQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVP 129
+E ++ E P T E P T M ST V +E S +T P + P
Sbjct: 487 TEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMP----VASSEASTLSTT-PVDTSTP 541
Query: 130 GTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSD 189
T +EA SS TP+ T+ P+S P +P +P + + S+ +D
Sbjct: 542 VTTSSEA----SSSSTTPEGTSIPTSTPSEGSTP-LTNMPVSTRLVVSSEASTTSTTPAD 596
Query: 190 QSDVLMVDVATSMPVVIKE---VPSSEAAE------DVMVAAPLVCSGKVLEVQ---VVN 237
+ + S E +P+S +E + V+ LV S + + V +
Sbjct: 597 SNTFVTTSSEASSSSTTAEGTSMPTSTYSERGTTITSMSVSTTLVASSEASTLSTTPVDS 656
Query: 238 QTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVY 297
T V + AE T+ E P TL A E ST+ + V
Sbjct: 657 NTPVTTSTEATSSSTTAE-GTSMPTSTYTEGSTPLTSMPVNTTLVASSEA-STLSTTPVD 714
Query: 298 NDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSK 357
PVT E P T A + + S+ + T+ +SK
Sbjct: 715 TSTPVTTST-------EASSSPTTADGASMPTSTPSEGS-----------TPLTSMPVSK 756
Query: 358 KSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQP---EVPAQLLDAEGAIKIGSE 414
+ S + + L +S ++ A S T+ +G P++ GS
Sbjct: 757 TLLTSSEASTLSTTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSE----------GSP 806
Query: 415 KSLHLEVEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPP 474
+ V IT + T E S ++ P + PV + + E S T + +S P
Sbjct: 807 LLTSIPVSITPV----TSPEASTLSTTPVD-SNSPVTT--STEVSSSPTPAEGTSMPTST 859
Query: 475 APEGLT 480
EG T
Sbjct: 860 YSEGRT 865
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 47.8 bits (112), Expect = 2e-05
Identities = 64/284 (22%), Positives = 105/284 (36%), Gaps = 44/284 (15%)
Query: 244 DLGSQPKENEAEPSTAS-SVPLQDEQEPPAYD--QAPEVTLQADIEVMSTVHISSVYNDV 300
D+ + E EA+P + P + + P + +APE +A E S + + D
Sbjct: 1873 DVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDE 1932
Query: 301 PVTEGV---------------------VYIEQLPEQIVIPFTDQVACLKENEQSKENEQS 339
P +EG V Q E+ P ++ V L+ +++E E
Sbjct: 1933 PESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGE 1992
Query: 340 PRVSPKSVVEKTTSGMSKKS----------VESVKLAQLEENAKYSSVYMEAEATALLSD 389
+ + V G +++ VE+ ++ EE + + E A
Sbjct: 1993 AQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPES 2052
Query: 390 TSLKGQPEVPAQLLDAEGAIKIGSEKSLHLEVEITSIVSDNTGQEESGENSVPQEMEGKP 449
++ PE + +AEG ++ +E H E E D QE GE E P
Sbjct: 2053 DGVEA-PEAEEEAQEAEGEVQ-EAEGEAHPESE------DVDAQEAEGEAQPESEGVEAP 2104
Query: 450 VLSGEAAEAVHSGTSVKSSSGPFPPAPEGLTAPEIEPEGESTAE 493
GEA +A G + G P EG+ APE E E + +E
Sbjct: 2105 EAEGEAQKA--EGIEAPETEGEAQPESEGIEAPEAEGEAQPESE 2146
Score = 42.4 bits (98), Expect = 0.001
Identities = 91/406 (22%), Positives = 146/406 (35%), Gaps = 47/406 (11%)
Query: 92 ESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTT 151
E + + E + + + E D T P +E EA + K A P+T +
Sbjct: 1864 EGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPE--AEKEAQPETES 1921
Query: 152 PPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPS 211
+ PE A A+ AAQ + +S+V + S
Sbjct: 1922 VEALETEGEDEPESEGAEAQEAEEAAQ---EAEGQTQPESEV---------------IES 1963
Query: 212 SEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPP 271
EA E+ A P + LEV+V Q + + +QP+ + E A + E+E
Sbjct: 1964 QEAEEE---AQPESEDVEALEVEVETQEA---EGEAQPESEDVEAPEAEGEMQEAEEEAQ 2017
Query: 272 AYDQAPEVTLQADIEVMSTVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENE 331
E +++ E V + TEG E + + P ++ A E E
Sbjct: 2018 PESDGVEAQPKSEGE-----EAQEVEGETQKTEGDAQPES--DGVEAPEAEEEAQEAEGE 2070
Query: 332 -QSKENEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDT 390
Q E E P + V + G ++ E V+ + E A+ +AE +T
Sbjct: 2071 VQEAEGEAHPE--SEDVDAQEAEGEAQPESEGVEAPEAEGEAQ------KAEGIEA-PET 2121
Query: 391 SLKGQPEVPA-QLLDAEGAIKIGSEKSLHLEVEITSIVSDNTGQEESGENSVPQEMEG-- 447
+ QPE + +AEG + SE + E + + + E E+EG
Sbjct: 2122 EGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVE 2181
Query: 448 KPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLTAPEIEPEGESTAE 493
P GEA + G + G P EG+ APE E E + E
Sbjct: 2182 APEAEGEA-QPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPE 2226
Score = 37.7 bits (86), Expect = 0.024
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 9/168 (5%)
Query: 332 QSKENEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTS 391
Q E P +S V++ G + + K +L E A+ ++ E E S+TS
Sbjct: 1724 QGAEGGLGPGLSQGPGVDEGEDGEGSQRLNRDKDPKLGE-AEGDAMAQEREGKTHNSETS 1782
Query: 392 LK---GQPEVPAQLLDAEGAIKIGSEKSLH---LEVEITSIVSDNTGQEESGENSVPQEM 445
G+ E + + G + G + S H L+ E + + GQ + E E
Sbjct: 1783 AGSELGEAEQEGEGISERG--ETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEA 1840
Query: 446 EGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLTAPEIEPEGESTAE 493
EG+ E EA + + + G P E + APE E E + +E
Sbjct: 1841 EGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESE 1888
>gi|8394343 sperm autoantigenic protein 17 [Homo sapiens]
Length = 151
Score = 46.2 bits (108), Expect = 7e-05
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 10 VPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMD-------IKDLVKQF 62
+P G LLEG++R +L+ P NI FAAAYF+ L R T D ++D
Sbjct: 12 IPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEWGSKVEDRFYNN 71
Query: 63 HQIKVEKWSEGTTPQKK 79
H + ++ E + P+++
Sbjct: 72 HAFEEQEPPEKSDPKQE 88
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 42.7 bits (99), Expect = 7e-04
Identities = 104/455 (22%), Positives = 149/455 (32%), Gaps = 77/455 (16%)
Query: 72 EGTTPQKKLECLKEPGKTSVE--SKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVP 129
EG K L+ LK+P T + +VPT + K T + +R PS
Sbjct: 500 EGLEKLKHLDFLKQPLATQKDLTGQVPTPVVKQTKLKQRADSRESLKPAAKPLPSKSVRK 559
Query: 130 GTEQTEAVGGLSSKPATPKTTTPPS-SPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHS 188
SK TP+ T PP S E V D
Sbjct: 560 -----------ESKEETPEVTKVNHVEKPPKVESKEKVMVKKDKP--------------- 593
Query: 189 DQSDVLMVDVATSMPVVIKEVPSSEA-----AEDVMVAAPLVCSGKVLEVQVVNQTSVHV 243
+ T V KEVPS E AE A V E V +T V
Sbjct: 594 -------IKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKP 646
Query: 244 DLGSQPKENEAEP--STASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDVP 301
+ + KE + P++ E++P + EV + E V + P
Sbjct: 647 EDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPK-KEVKKETP 705
Query: 302 VTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSVE 361
E +++ ++ V +E E KE ++ P+ + KS S K +
Sbjct: 706 PKEVKKEVKKEEKKEVKK--------EEKEPKKEIKKLPKDAKKS--STPLSEAKKPAAL 755
Query: 362 SVKLAQLEENAKYSSV------------YMEAEATALLSDTSLKGQPEVPAQLLDAEGAI 409
K+ + EE+ K SV ++ E A + + G A ++ A G
Sbjct: 756 KPKVPKKEESVKKDSVAAGKPKEKGKIKVIKKEGKAAEAVAAAVGTGATTAAVMAAAGIA 815
Query: 410 KIGSEKSLHLEVEITSIVSDNTGQ-EESGENSVPQEMEGKPVLS----------GEAAEA 458
IG K L E + S D T EE V + KP L E EA
Sbjct: 816 AIGPAKELEAERSLMSSPEDLTKDFEELKAEEVDVTKDIKPQLELIEDEEKLKETEPVEA 875
Query: 459 VHSGTSVKSSSGPFPPAPEGLTAPEIEPEGESTAE 493
+ + GP EG+T E E E E T E
Sbjct: 876 YVIQKEREVTKGPAESPDEGITTTEGEGECEQTPE 910
Score = 35.4 bits (80), Expect = 0.12
Identities = 80/417 (19%), Positives = 150/417 (35%), Gaps = 48/417 (11%)
Query: 99 MEKSTDTDEDNVTRTEYSDKTTQFPSV--YAVPGTEQTEAV-------------GGLS-- 141
+EK+T T E+ + S+KTT P V Y+ TE++ + GG +
Sbjct: 1943 IEKTTRTPEEGGYSYDISEKTTSPPEVSGYSYEKTERSRRLLDDISNGYDDSEDGGHTLG 2002
Query: 142 ----SKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVD 197
S T K T+ P S + + D + + K++ + Q+ +
Sbjct: 2003 DPSYSYETTEKITSFPESEGYSYETSTKTTRTPDTSTYCYETAEKIT--RTPQASTYSYE 2060
Query: 198 VATSMPVVIKEVPSSEAAEDVMVAAPLVCSGK----VLEVQVVNQTSVHVDLGSQPKENE 253
+ K+ P SEA +DV + C K L +N + +P E
Sbjct: 2061 TSDLCYTAEKKSP-SEARQDVDLCLVSSCEYKHPKTELSPSFINPNPLEWFASEEPTEES 2119
Query: 254 AEPSTASS---VPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDVPVTEGVVYIE 310
+P T S P +Q+ D+ P ++ + + + P I+
Sbjct: 2120 EKPLTQSGGAPPPPGGKQQGRQCDETPPTSVSESAPSQTDSDVPPETEECPSITADANID 2179
Query: 311 QLPEQIVIPFTDQVACLKENEQS----KENEQSPRVSPKSVVEKTTSGMSKKSVESVKLA 366
E IP TD+ K + ++ SPR S+V+ + + +++K
Sbjct: 2180 SEDESETIP-TDKTVTYKHMDPPPAPVQDRSPSPRHPDVSMVDPEALAIEQNLGKALK-K 2237
Query: 367 QLEENAKYSSVYMEAEATALLSDTSLKGQP----EVPAQLLDAEGAIKIGSEKSLHLEVE 422
L+E K + ++++ + + K +P PA L E + K+ S +
Sbjct: 2238 DLKEKTKTKKPGTKTKSSSPVKKSDGKSKPLAASPKPAGL--KESSDKVSRVASPKKKES 2295
Query: 423 ITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHS-----GTSVKSSSGPFPP 474
+ T E ++ E K + A+++ + GT+ + S PP
Sbjct: 2296 VEKAAKPTTTPEVKAARGEEKDKETKNAANASASKSAKTATAGPGTTKTTKSSAVPP 2352
Score = 32.0 bits (71), Expect = 1.3
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 101 KSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTA 160
K T T E R E DK T+ + + + +T G P T KTT + PP
Sbjct: 2301 KPTTTPEVKAARGEEKDKETKNAANASASKSAKTATAG-----PGTTKTTKSSAVPPGLP 2355
Query: 161 VSPEFAYVP 169
V + Y+P
Sbjct: 2356 VYLDLCYIP 2364
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 42.4 bits (98), Expect = 0.001
Identities = 92/450 (20%), Positives = 154/450 (34%), Gaps = 45/450 (10%)
Query: 59 VKQFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDK 118
VK + K E +P + KE K+ E K P + + + + + +K
Sbjct: 544 VKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEK 603
Query: 119 TTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSP-PPTAVSPEFAYVPADPAQLAA 177
A E V + PA K+ SP A SPE A P
Sbjct: 604 AKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSP-------- 655
Query: 178 QMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLE--VQV 235
+ S + V P K +EA +P+ K E
Sbjct: 656 ----EKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSP 711
Query: 236 VNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISS 295
V + + + P + EA+ + P+++E + P ++PE T+ + S
Sbjct: 712 VKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKA--------KTLDVKS 763
Query: 296 VYNDVPVTEGV-VYIEQLPEQIVIPFTDQV-------ACLKENEQSKENEQSPRVSPKSV 347
P E ++ PE+ P ++V + LKE+ ++ E E + KS
Sbjct: 764 PEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSP 823
Query: 348 VEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEG 407
V++ K E K A+ EE A + E + D+ + P+ A E
Sbjct: 824 VKEEEKPQEVKVKEPPKKAE-EEKAPATPKTEEKK------DSKKEEAPKKEAPKPKVEE 876
Query: 408 AIKIGSEKSLHLEVEITSIVSDNTGQEESGENSVPQEME----GKPVLSGEAAEAVHSGT 463
+ EK +VE +++ + + E P ++E KP E A+
Sbjct: 877 KKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDA 936
Query: 464 SVKSSSGPFPPAPEGLTAPEIEPEGESTAE 493
K P PA + APE + E A+
Sbjct: 937 KAKE---PSKPAEKKEAAPEKKDTKEEKAK 963
Score = 40.8 bits (94), Expect = 0.003
Identities = 76/352 (21%), Positives = 129/352 (36%), Gaps = 39/352 (11%)
Query: 55 IKDLVKQFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQME-KSTDTDEDNVTRT 113
+K K + K +E +P+K +KE K+ ++K P + E KS + + V
Sbjct: 670 VKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEE 729
Query: 114 EYSDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPAD-- 171
+ + + P + EA +K T SP + E A PAD
Sbjct: 730 AKTPEKAKSP--------VKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKF 781
Query: 172 PAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVL 231
P + + + +V S +S + A KE+P E V +P+ K
Sbjct: 782 PEKAKSPVKEEVKSPEKAKSPLKEDAKAPE-----KEIPKKEE-----VKSPVKEEEKPQ 831
Query: 232 EVQVVN--QTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYD-QAPEVTLQADIEVM 288
EV+V + + + PK E + S P ++ +P + + P V + +V
Sbjct: 832 EVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVE 891
Query: 289 STVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVV 348
+ + VP E ++ P ++ + KE+ + KE + + P
Sbjct: 892 AKKEEAEDKKKVPTPE-----KEAPAKVEV---------KEDAKPKEKTEVAKKEPDDAK 937
Query: 349 EKTTS-GMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVP 399
K S KK K EE AK + EA A D +L +P P
Sbjct: 938 AKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKP 989
Score = 37.4 bits (85), Expect = 0.031
Identities = 66/336 (19%), Positives = 124/336 (36%), Gaps = 35/336 (10%)
Query: 156 PPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAA 215
P P ++ +P+ + + K+ + + + ++V+ T V +EV E
Sbjct: 417 PIPFSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEK 476
Query: 216 EDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQ 275
E G+ E + + + S P E A P + P+++E + PA +
Sbjct: 477 EAKEEEGKEEEGGEEEEAEGGEE-----ETKSPPAEEAASPEKEAKSPVKEEAKSPAEAK 531
Query: 276 APEVTLQADIEVMSTVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKE 335
+PE E S + S PE+ P ++ K ++K
Sbjct: 532 SPEKE-----EAKSPAEVKS-----------------PEKAKSPAKEEA---KSPPEAKS 566
Query: 336 NEQSPRVSPKSVVE-KTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKG 394
E+ SP V + +K+ +S A+ E AK S V EA++ A + + +K
Sbjct: 567 PEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK-SPVKEEAKSPA-EAKSPVKE 624
Query: 395 QPEVPAQLLDAEGAIKIGSEKSLHLEVEITSIVSDNTGQEESGENSVPQEMEGKPVLSGE 454
+ + PA++ E A E++ E + S + E ++ V E +
Sbjct: 625 EAKSPAEVKSPEKAKSPTKEEAKSPE-KAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSP 683
Query: 455 AAEAVHSGTSVKSSSGPFPPAPEGLTAPEIEPEGES 490
S KS +PE +P ++ E +S
Sbjct: 684 VKAEAKSPEKAKSPVKEEAKSPEKAKSP-VKEEAKS 718
>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3
[Homo sapiens]
Length = 1585
Score = 41.6 bits (96), Expect = 0.002
Identities = 78/404 (19%), Positives = 135/404 (33%), Gaps = 83/404 (20%)
Query: 131 TEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQ 190
T +T A+ ++ P P TT S T +P + + + P A + + S +
Sbjct: 250 TSETTAIVSIAELPLPPSPTTVSSVARSTIAAPTSSALSSQPIFTTA--IDDRCELSSPR 307
Query: 191 SDVLMVDVATSMPVVIKEVPSSEAAEDVMVAA--------PLVCSGKVLE---------- 232
D + + TS +P++E +D+ PLV S ++
Sbjct: 308 EDTIPIPSLTSCTETSDPLPTNENDDDICKKPCSVAPNDIPLVSSTNLINEINGVSEKLS 367
Query: 233 -----VQVVNQTSVHVDLGSQPKENEAE------------PSTASSVPLQDEQEPPAYDQ 275
V++V Q + + L + EN E PST S P P +
Sbjct: 368 ATESIVEIVKQEVLPLTLELEILENPPEEMKLECIPAPITPSTVPSFPPTPPTPPASPPH 427
Query: 276 APEVTLQADIEVMSTVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKE 335
P + A V S +V + E + CL E+ + +
Sbjct: 428 TPVIVPAAATTVSSPSAAITVQRVLEEDESIR-----------------TCLSEDAKEIQ 470
Query: 336 NEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQ 395
N+ +E G +++ ++S L N++ S V + T + K +
Sbjct: 471 NK----------IEVEADGQTEEILDSQNL-----NSRRSPVPAQIAITVPKTWKKPKDR 515
Query: 396 PEVPAQLLDAEGAIKIGSEKSLHLEVEIT--------------SIVSDNTGQEESGENSV 441
++L+AE +K E S+ +E S + EE+GE +
Sbjct: 516 TRTTEEMLEAELELKAEEELSIDKVLESEQDKMSQGFHPERDPSDLKKVKAVEENGEEAE 575
Query: 442 PQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLTAPEIE 485
P + V GE +A T FP PE + E
Sbjct: 576 PVRNGAESVSEGEGIDANSGSTDSSGDGVTFPFKPESWKPTDTE 619
>gi|19923559 EMSY protein [Homo sapiens]
Length = 1322
Score = 40.0 bits (92), Expect = 0.005
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 23/263 (8%)
Query: 141 SSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVL-----M 195
+S +TP +T PS T SP A ++ L + V S+ D
Sbjct: 147 TSTTSTPTSTPVPSGSIATVKSPRPASPASNVVVLPSGSTVYVKSVSCSDEDEKPRKRRR 206
Query: 196 VDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEV--QVVNQTSVHVDLGSQPKENE 253
+ ++S PVV+KEVP + + P+ S K+ + + N H+ S K
Sbjct: 207 TNSSSSSPVVLKEVPKAVVPVSKTITVPVSGSPKMSNIMQSIANSLPPHM---SPVKITF 263
Query: 254 AEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDVPVTEGVVYIEQLP 313
+PST ++ Q+ +P T +I +S H + + T + Q P
Sbjct: 264 TKPSTQTT--NTTTQKVIIVTTSPSSTFVPNI--LSKSHNYAAVTKLVPTSVIASTTQKP 319
Query: 314 EQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEENAK 373
++ T + L N S + +P P +V T+ +S S SV ++ + +
Sbjct: 320 PVVI---TASQSSLVSNSSSGSSSSTPSPIPNTVA--VTAVVS--STPSVVMSTVAQGVS 372
Query: 374 YSSVYMEAEATALLSDTSLKGQP 396
S++ M +T L S SL P
Sbjct: 373 TSAIKM--ASTRLPSPKSLVSAP 393
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 39.7 bits (91), Expect = 0.006
Identities = 93/431 (21%), Positives = 145/431 (33%), Gaps = 77/431 (17%)
Query: 122 FPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPP-----------------PTAVSPE 164
+P V VP +E+ + L S A TT P S PP P A SP
Sbjct: 1228 YPKVATVPQSEKKPSKYPLCSADAAVSTTPPGSPPPPPPLPEPPVLKVLSSLKPAAPSPA 1287
Query: 165 FAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDV---ATSMPVVIKEVPSSEA------- 214
A A A AA +S + + ++ + S +E P S A
Sbjct: 1288 TAATTAAAASTAASSTASSASKTASPLEHILQTLFGKKKSFDPSAREPPGSTAGLPQEPK 1347
Query: 215 --AEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQP--KENEAEPSTASSVPLQDEQEP 270
AED + A PL+ Q ++ + +P E E +P A L +
Sbjct: 1348 TTAEDGVPAPPLLDPIVQQFGQFSKDKALEEEEDDRPYDPEEEYDPERAFDTQLVERGRR 1407
Query: 271 PAYDQAPEVTLQADIEVMSTVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKEN 330
++APE EV ++ + VT ++ LP ++ C
Sbjct: 1408 HEVERAPEAAAAEREEVAYDPEDETILEEAKVT-----VDDLPNRM---------CADVR 1453
Query: 331 EQSKENEQSP---RVSPKSVVEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATAL- 386
S E P +P V ++ K +E K QLEE + A ++
Sbjct: 1454 RNSVERPAEPVAGAATPSLVEQQKMLEELNKQIEEQK-RQLEEQEEALRQQRAAVGVSMA 1512
Query: 387 ---LSDTSLKGQP----------EVPAQLLDAEGAIKIGSEKSLHLEVEITSIVSDNTGQ 433
+SD + P + Q D ++ S+ S H + ++ TG+
Sbjct: 1513 HFSVSDALMSPPPKSSLPKAELFQQEQQSADKPASLPPASQASNHRDPRQARRLAAETGE 1572
Query: 434 EE----------SGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSS---SGPFPPAPEGLT 480
E + ++P+ + L G+A V SS SG PPA
Sbjct: 1573 GEGEPLSRLSARGAQGALPERDASRGGLVGQAPMPVPEEKEPASSPWASGEKPPAGSEQD 1632
Query: 481 APEIEPEGEST 491
+ EP GE T
Sbjct: 1633 GWKAEP-GEGT 1642
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 38.9 bits (89), Expect = 0.011
Identities = 90/395 (22%), Positives = 136/395 (34%), Gaps = 79/395 (20%)
Query: 85 EPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQ---------FPSVYAVPGTEQTE 135
EP + + E +V T +E+ +E+ E T + P V P E+ +
Sbjct: 9904 EPEEVAFEEEVVTHVEEYLVEEEEEYIHEEEEFITEEEVVPVIPVKVPEVPRKPVPEEKK 9963
Query: 136 AVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHS-----DQ 190
V P K PP+ P PE VP + KV + ++
Sbjct: 9964 PV------PVPKKKEAPPAKVPEVPKKPE-EKVPVLIPKKEKPPPAKVPEVPKKPVPEEK 10016
Query: 191 SDVLMVDVATSMPVVIKEVPSSEAAED-VMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQP 249
V + + P + EVP E V V AP +V V P
Sbjct: 10017 VPVPVPKKVEAPPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEV------------P 10064
Query: 250 KENEAEPSTASSVPLQDEQEPPAYDQAPE-----VTLQADIEVMSTVHISSVYNDVPVTE 304
K+ E + VP + E PP + E V L + EV+ I +P E
Sbjct: 10065 KKLIPEEKKPTPVPKKVEAPPPKVPKKREPVPVPVALPQEEEVLFEEEIVPEEEVLPEEE 10124
Query: 305 GVVYIEQ---------LPEQIVIPFTDQVA------CLKENEQSKENEQSPRVSPKSVVE 349
V+ E+ LPE+ IP ++ +E E E E P V PK V
Sbjct: 10125 EVLPEEEEVLPEEEEVLPEEEEIPPEEEEVPPEEEYVPEEEEFVPEEEVLPEVKPKVPVP 10184
Query: 350 KTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGAI 409
+ KK E + +E A + V PEVP ++ E I
Sbjct: 10185 APVPEIKKKVTEKKVVIPKKEEAPPAKV------------------PEVPKKV--EEKRI 10224
Query: 410 KIGSEKSLHLEVEITSIVSDNTGQEESGENSVPQE 444
+ E+ + L VE+T + +E E +P+E
Sbjct: 10225 ILPKEEEV-LPVEVT----EEPEEEPISEEEIPEE 10254
Score = 33.9 bits (76), Expect = 0.35
Identities = 49/222 (22%), Positives = 82/222 (36%), Gaps = 50/222 (22%)
Query: 68 EKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYA 127
E+W E ++ ++ KE + S E KVP ++ + K P V
Sbjct: 9138 EEWEEAYQEREVIQVQKEVYEESHERKVPAKVPEK---------------KAPPPPKVIK 9182
Query: 128 VPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIH 187
P E+ E + T P S VP P++ + +
Sbjct: 9183 KPVIEKIEKTSRRMEEEKVQVTKVPEVSK---------KIVPQKPSR---------TPVQ 9224
Query: 188 SDQSDVLMVDVATSMPVVIKEVP--SSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDL 245
+ +V + V T V+ +E +S E+V V P V + ++V + +HV +
Sbjct: 9225 EEVIEVKVPAVHTKKMVISEEKMFFASHTEEEVSVTVPEV------QKEIVTEEKIHVAI 9278
Query: 246 GSQ----PKENE----AEPSTASSVPLQDEQEPPAYDQAPEV 279
+ PK E P + VP+ + EPPA + PEV
Sbjct: 9279 SKRVEPPPKVPELPEKPAPEEVAPVPIPKKVEPPA-PKVPEV 9319
Score = 33.5 bits (75), Expect = 0.45
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 13/165 (7%)
Query: 323 QVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAE 382
Q K E ++ N + ++ + V E T S + E ++ ++E +A V +
Sbjct: 25062 QFTVTKLKENTEYNFRICAINSEGVGEPATLPGSVVAQERIEPPEIELDADLRKVVVLRA 25121
Query: 383 ATALLSDTSLKGQPEVPAQLLDAEGAIKIGSEKSLHLEVEITSIVSDNTGQEESGENSVP 442
+ L ++KG+PE + AEG + + + T +V DN + +SG ++
Sbjct: 25122 SATLRLFVTIKGRPEPEVKWEKAEGILT--DRAQIEVTSSFTMLVIDNVTRFDSGRYNLT 25179
Query: 443 QEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLTAPEIEPE 487
E + ++ V S P AP LT E++ +
Sbjct: 25180 LE-------NNSGSKTAFVNVRVLDS----PSAPVNLTIREVKKD 25213
Score = 32.7 bits (73), Expect = 0.77
Identities = 80/342 (23%), Positives = 123/342 (35%), Gaps = 71/342 (20%)
Query: 65 IKVEKWSEGTTPQKKLECLKEPGKTSVE-SKVPTQMEKSTDTDEDNVTRTEYSDKTTQFP 123
+KV + + P+KK+ + P K V +KVP + + E V + P
Sbjct: 10607 VKVPEAPKEVVPEKKVP-VPPPKKPEVPPTKVPEVPKVAVP--EKKVPEAIPPKPESPPP 10663
Query: 124 SVYAVP---GTEQTEAVGGLSSKPATP-KTTTPPSSPPPTAVSPEFAYVPADPAQLAAQM 179
V+ P E+ A +PA P + T PP P P +P V A +L
Sbjct: 10664 EVFEEPEEVALEEPPAEVVEEPEPAAPPQVTVPPKKPVPEKKAPA---VVAKKPELP--- 10717
Query: 180 LGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEV--QVVN 237
+P V KEV + V+ P KV EV +VV
Sbjct: 10718 -------------------PVKVPEVPKEVVPEKKVPLVVPKKPEAPPAKVPEVPKEVVP 10758
Query: 238 QTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVY 297
+ V V PK+ E P+ VP + P ++ P V + E
Sbjct: 10759 EKKVAV-----PKKPEVPPAKVPEVP-----KKPVLEEKPAVPVPERAE----------- 10797
Query: 298 NDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSK 357
P E VY E PE+I +++A +E E+ P V P +V E+ + +
Sbjct: 10798 --SPPPE--VYEE--PEEIAP--EEEIAPEEEKPVPVAEEEEPEVPPPAVPEEPKKIIPE 10849
Query: 358 KSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVP 399
K V +K + + E E ++ LK +P P
Sbjct: 10850 KKVPVIKKPE-------APPPKEPEPEKVIEKPKLKPRPPPP 10884
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 38.9 bits (89), Expect = 0.011
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 16/112 (14%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEK---STDTDEDNVTRTEYSDKTTQFPSVYAVPG 130
TTP++ KEP T+ + PT +K +T + T E + TT+ PS P
Sbjct: 328 TTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPS----PT 383
Query: 131 TEQTEAVGGLSSKPATPKTTTP---------PSSPPPTAVSPEFAYVPADPA 173
T + A S P T K P P P PT P +PA
Sbjct: 384 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 435
Score = 37.7 bits (86), Expect = 0.024
Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 2/92 (2%)
Query: 84 KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
KEP T+ + PT +K T T + + T P A E+
Sbjct: 472 KEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA 531
Query: 144 PATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
P TPK P P P PT P +PA
Sbjct: 532 PTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 563
Score = 37.7 bits (86), Expect = 0.024
Identities = 71/363 (19%), Positives = 118/363 (32%), Gaps = 49/363 (13%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTE 132
TTP++ KE T+ + PT +++ T E + TT+ P+
Sbjct: 557 TTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPA 616
Query: 133 QTEAVGGLSSKPATPKTTTP----PSSPPPTAVSPEFAYVPADPAQLAAQML------GK 182
T G + P P TTP P++P TA + P P + A + L G
Sbjct: 617 PTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGP 676
Query: 183 VSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVH 242
S+ + + A + P + A P S T++H
Sbjct: 677 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIH 736
Query: 243 -------VDLGSQPKENEAE--------PSTASSVPLQDEQEPPAYDQ--------APEV 279
+L ++P E P+T + + E A D+ PE
Sbjct: 737 KSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPET 796
Query: 280 TLQADIEVMSTVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQS 339
T A T + + +T + Q PF ++ LK +
Sbjct: 797 TTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPF--KITTLK----------T 844
Query: 340 PRVSPKSVVEK---TTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQP 396
++PK K TT+ + K E+ K N+K ++ + A TS K
Sbjct: 845 TTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPK 904
Query: 397 EVP 399
+P
Sbjct: 905 TMP 907
Score = 36.2 bits (82), Expect = 0.070
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 8/107 (7%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKS-TDTDEDNVTRTEYSDKTTQFPSVYA---- 127
TTP++ KEP T+++S T E + T T T E + TT+ P+
Sbjct: 219 TTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEP 278
Query: 128 VPGTEQTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADP 172
P T + A S P TPK P P P PT P +P
Sbjct: 279 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 325
Score = 35.8 bits (81), Expect = 0.091
Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKS-TDTDEDNVTRTEYSDKTTQFPSVYAVPGT 131
TTP++ KEP T+ + PT + + T T E T T+ + T + PS
Sbjct: 367 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 426
Query: 132 EQTEAVGGLSSKPATPKTTTP-------PSSPPPTAVSPEFAYVPADPA 173
T + P P TTP P P PT P +PA
Sbjct: 427 APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA 475
Score = 35.0 bits (79), Expect = 0.16
Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 3/103 (2%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTE 132
TTP++ KEP T+ + PT ++ T T T P A E
Sbjct: 445 TTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 504
Query: 133 QTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
+ P TP+ TP P P PT P +PA
Sbjct: 505 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA 547
Score = 33.1 bits (74), Expect = 0.59
Identities = 61/323 (18%), Positives = 104/323 (32%), Gaps = 49/323 (15%)
Query: 84 KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
KEP T+ + PT +++ T T + P A T S+
Sbjct: 552 KEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTT 611
Query: 144 PATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMP 203
P TTP + P T P P +PA + + P
Sbjct: 612 CDKPAPTTPKGTAPTTPKEPA-PTTPKEPAPTTPK---------------------GTAP 649
Query: 204 VVIKE-VPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAEPSTASS- 261
+KE P++ AP G TS D + E P+T
Sbjct: 650 TTLKEPAPTTPKKPAPKELAPTTTKG---------PTSTTSDKPAPTTPKETAPTTPKEP 700
Query: 262 VPLQDEQEPPAYDQAP-----EVTLQADIEVMSTVHISSVYN--DVPVTEGVVYIEQLPE 314
P ++ P + P EV+ + +T+H S + ++ +E P+
Sbjct: 701 APTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPK 760
Query: 315 QIVIPFTDQVACLK----ENEQSKENEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEE 370
+ +P T A K + K E+ R +P +TT+ K + E+ +
Sbjct: 761 EPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTP-----ETTTAAPKMTKETATTTEKTT 815
Query: 371 NAKYSSVYMEAEATALLSDTSLK 393
+K ++ + +T T K
Sbjct: 816 ESKITATTTQVTSTTTQDTTPFK 838
Score = 32.3 bits (72), Expect = 1.0
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRT--EYSDKTTQFPSVYAVPG 130
TTP++ KEP T+ +S T E + T + T E + T + P+ P
Sbjct: 273 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT----PT 328
Query: 131 TEQTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
T + A P TPK P P P PT P +PA
Sbjct: 329 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 373
Score = 32.0 bits (71), Expect = 1.3
Identities = 22/91 (24%), Positives = 32/91 (35%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQ 133
TT + KEP T+ + PT ++ T T + P A T++
Sbjct: 406 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKK 465
Query: 134 TEAVGGLSSKPATPKTTTPPSSPPPTAVSPE 164
P TPK T P + T +PE
Sbjct: 466 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 496
Score = 31.6 bits (70), Expect = 1.7
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEKS--TDTDEDNVTRTEYSDKTTQFPSVYAVPGT 131
TT + KEP T+ + PT ++ T T E T T+ + T + P+ P T
Sbjct: 250 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA----PTT 305
Query: 132 EQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPE 164
+ A P TPK P + PT +P+
Sbjct: 306 PKKPA-------PTTPKEPAPTTPKEPTPTTPK 331
Score = 29.6 bits (65), Expect = 6.6
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 5/141 (3%)
Query: 27 KTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVKQFHQIK-VEKWS-EGTTPQKKLECLK 84
K +N+ +E T T+ D K+ + + +EK S + P K+
Sbjct: 138 KETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKP 197
Query: 85 EP-GKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
P +T+ + T ++ T T T + T ++ + P T + A S
Sbjct: 198 TPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPT--TIKSAPTTPKEPAPTTTKSA 255
Query: 144 PATPKTTTPPSSPPPTAVSPE 164
P TPK P ++ P +P+
Sbjct: 256 PTTPKEPAPTTTKEPAPTTPK 276
Score = 29.3 bits (64), Expect = 8.6
Identities = 32/136 (23%), Positives = 47/136 (34%), Gaps = 17/136 (12%)
Query: 51 TTMDIKDLVKQFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQ--MEKSTDTDED 108
TT++ K+ Q + E TT K+ + ++ KTS + PT + K T E
Sbjct: 148 TTVETKETTTTNKQTSTDG-KEKTTSAKETQSIE---KTSAKDLAPTSKVLAKPTPKAET 203
Query: 109 NVTRTEYSDKTTQFPSVYAVPG--TEQTEAVGGLSSKPATPKTTTP---------PSSPP 157
+ P+ P T + + S P TPK P P P
Sbjct: 204 TTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPA 263
Query: 158 PTAVSPEFAYVPADPA 173
PT P +PA
Sbjct: 264 PTTTKEPAPTTPKEPA 279
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 38.9 bits (89), Expect = 0.011
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 16/112 (14%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEK---STDTDEDNVTRTEYSDKTTQFPSVYAVPG 130
TTP++ KEP T+ + PT +K +T + T E + TT+ PS P
Sbjct: 369 TTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPS----PT 424
Query: 131 TEQTEAVGGLSSKPATPKTTTP---------PSSPPPTAVSPEFAYVPADPA 173
T + A S P T K P P P PT P +PA
Sbjct: 425 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 476
Score = 37.7 bits (86), Expect = 0.024
Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 2/92 (2%)
Query: 84 KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
KEP T+ + PT +K T T + + T P A E+
Sbjct: 513 KEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA 572
Query: 144 PATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
P TPK P P P PT P +PA
Sbjct: 573 PTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 604
Score = 37.7 bits (86), Expect = 0.024
Identities = 71/363 (19%), Positives = 118/363 (32%), Gaps = 49/363 (13%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTE 132
TTP++ KE T+ + PT +++ T E + TT+ P+
Sbjct: 598 TTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPA 657
Query: 133 QTEAVGGLSSKPATPKTTTP----PSSPPPTAVSPEFAYVPADPAQLAAQML------GK 182
T G + P P TTP P++P TA + P P + A + L G
Sbjct: 658 PTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGP 717
Query: 183 VSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVH 242
S+ + + A + P + A P S T++H
Sbjct: 718 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIH 777
Query: 243 -------VDLGSQPKENEAE--------PSTASSVPLQDEQEPPAYDQ--------APEV 279
+L ++P E P+T + + E A D+ PE
Sbjct: 778 KSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPET 837
Query: 280 TLQADIEVMSTVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQS 339
T A T + + +T + Q PF ++ LK +
Sbjct: 838 TTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPF--KITTLK----------T 885
Query: 340 PRVSPKSVVEK---TTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQP 396
++PK K TT+ + K E+ K N+K ++ + A TS K
Sbjct: 886 TTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPK 945
Query: 397 EVP 399
+P
Sbjct: 946 TMP 948
Score = 36.2 bits (82), Expect = 0.070
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 8/107 (7%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKS-TDTDEDNVTRTEYSDKTTQFPSVYA---- 127
TTP++ KEP T+++S T E + T T T E + TT+ P+
Sbjct: 260 TTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEP 319
Query: 128 VPGTEQTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADP 172
P T + A S P TPK P P P PT P +P
Sbjct: 320 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 366
Score = 35.8 bits (81), Expect = 0.091
Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKS-TDTDEDNVTRTEYSDKTTQFPSVYAVPGT 131
TTP++ KEP T+ + PT + + T T E T T+ + T + PS
Sbjct: 408 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 467
Query: 132 EQTEAVGGLSSKPATPKTTTP-------PSSPPPTAVSPEFAYVPADPA 173
T + P P TTP P P PT P +PA
Sbjct: 468 APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA 516
Score = 35.0 bits (79), Expect = 0.16
Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 3/103 (2%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTE 132
TTP++ KEP T+ + PT ++ T T T P A E
Sbjct: 486 TTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 545
Query: 133 QTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
+ P TP+ TP P P PT P +PA
Sbjct: 546 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA 588
Score = 33.1 bits (74), Expect = 0.59
Identities = 61/323 (18%), Positives = 104/323 (32%), Gaps = 49/323 (15%)
Query: 84 KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
KEP T+ + PT +++ T T + P A T S+
Sbjct: 593 KEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTT 652
Query: 144 PATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMP 203
P TTP + P T P P +PA + + P
Sbjct: 653 CDKPAPTTPKGTAPTTPKEPA-PTTPKEPAPTTPK---------------------GTAP 690
Query: 204 VVIKE-VPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAEPSTASS- 261
+KE P++ AP G TS D + E P+T
Sbjct: 691 TTLKEPAPTTPKKPAPKELAPTTTKG---------PTSTTSDKPAPTTPKETAPTTPKEP 741
Query: 262 VPLQDEQEPPAYDQAP-----EVTLQADIEVMSTVHISSVYN--DVPVTEGVVYIEQLPE 314
P ++ P + P EV+ + +T+H S + ++ +E P+
Sbjct: 742 APTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPK 801
Query: 315 QIVIPFTDQVACLK----ENEQSKENEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEE 370
+ +P T A K + K E+ R +P +TT+ K + E+ +
Sbjct: 802 EPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTP-----ETTTAAPKMTKETATTTEKTT 856
Query: 371 NAKYSSVYMEAEATALLSDTSLK 393
+K ++ + +T T K
Sbjct: 857 ESKITATTTQVTSTTTQDTTPFK 879
Score = 32.3 bits (72), Expect = 1.0
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRT--EYSDKTTQFPSVYAVPG 130
TTP++ KEP T+ +S T E + T + T E + T + P+ P
Sbjct: 314 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT----PT 369
Query: 131 TEQTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
T + A P TPK P P P PT P +PA
Sbjct: 370 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 414
Score = 32.0 bits (71), Expect = 1.3
Identities = 22/91 (24%), Positives = 32/91 (35%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQ 133
TT + KEP T+ + PT ++ T T + P A T++
Sbjct: 447 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKK 506
Query: 134 TEAVGGLSSKPATPKTTTPPSSPPPTAVSPE 164
P TPK T P + T +PE
Sbjct: 507 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 537
Score = 31.6 bits (70), Expect = 1.7
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEKS--TDTDEDNVTRTEYSDKTTQFPSVYAVPGT 131
TT + KEP T+ + PT ++ T T E T T+ + T + P+ P T
Sbjct: 291 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA----PTT 346
Query: 132 EQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPE 164
+ A P TPK P + PT +P+
Sbjct: 347 PKKPA-------PTTPKEPAPTTPKEPTPTTPK 372
Score = 29.6 bits (65), Expect = 6.6
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 5/141 (3%)
Query: 27 KTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVKQFHQIK-VEKWS-EGTTPQKKLECLK 84
K +N+ +E T T+ D K+ + + +EK S + P K+
Sbjct: 179 KETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKP 238
Query: 85 EP-GKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
P +T+ + T ++ T T T + T ++ + P T + A S
Sbjct: 239 TPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPT--TIKSAPTTPKEPAPTTTKSA 296
Query: 144 PATPKTTTPPSSPPPTAVSPE 164
P TPK P ++ P +P+
Sbjct: 297 PTTPKEPAPTTTKEPAPTTPK 317
Score = 29.3 bits (64), Expect = 8.6
Identities = 32/136 (23%), Positives = 47/136 (34%), Gaps = 17/136 (12%)
Query: 51 TTMDIKDLVKQFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQ--MEKSTDTDED 108
TT++ K+ Q + E TT K+ + ++ KTS + PT + K T E
Sbjct: 189 TTVETKETTTTNKQTSTDG-KEKTTSAKETQSIE---KTSAKDLAPTSKVLAKPTPKAET 244
Query: 109 NVTRTEYSDKTTQFPSVYAVPG--TEQTEAVGGLSSKPATPKTTTP---------PSSPP 157
+ P+ P T + + S P TPK P P P
Sbjct: 245 TTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPA 304
Query: 158 PTAVSPEFAYVPADPA 173
PT P +PA
Sbjct: 305 PTTTKEPAPTTPKEPA 320
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 38.9 bits (89), Expect = 0.011
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 16/112 (14%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEK---STDTDEDNVTRTEYSDKTTQFPSVYAVPG 130
TTP++ KEP T+ + PT +K +T + T E + TT+ PS P
Sbjct: 421 TTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPS----PT 476
Query: 131 TEQTEAVGGLSSKPATPKTTTP---------PSSPPPTAVSPEFAYVPADPA 173
T + A S P T K P P P PT P +PA
Sbjct: 477 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 528
Score = 37.7 bits (86), Expect = 0.024
Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 2/92 (2%)
Query: 84 KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
KEP T+ + PT +K T T + + T P A E+
Sbjct: 565 KEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA 624
Query: 144 PATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
P TPK P P P PT P +PA
Sbjct: 625 PTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 656
Score = 37.7 bits (86), Expect = 0.024
Identities = 71/363 (19%), Positives = 118/363 (32%), Gaps = 49/363 (13%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTE 132
TTP++ KE T+ + PT +++ T E + TT+ P+
Sbjct: 650 TTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPA 709
Query: 133 QTEAVGGLSSKPATPKTTTP----PSSPPPTAVSPEFAYVPADPAQLAAQML------GK 182
T G + P P TTP P++P TA + P P + A + L G
Sbjct: 710 PTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGP 769
Query: 183 VSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVH 242
S+ + + A + P + A P S T++H
Sbjct: 770 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIH 829
Query: 243 -------VDLGSQPKENEAE--------PSTASSVPLQDEQEPPAYDQ--------APEV 279
+L ++P E P+T + + E A D+ PE
Sbjct: 830 KSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPET 889
Query: 280 TLQADIEVMSTVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQS 339
T A T + + +T + Q PF ++ LK +
Sbjct: 890 TTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPF--KITTLK----------T 937
Query: 340 PRVSPKSVVEK---TTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQP 396
++PK K TT+ + K E+ K N+K ++ + A TS K
Sbjct: 938 TTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPK 997
Query: 397 EVP 399
+P
Sbjct: 998 TMP 1000
Score = 36.2 bits (82), Expect = 0.070
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 8/107 (7%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKS-TDTDEDNVTRTEYSDKTTQFPSVYA---- 127
TTP++ KEP T+++S T E + T T T E + TT+ P+
Sbjct: 312 TTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEP 371
Query: 128 VPGTEQTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADP 172
P T + A S P TPK P P P PT P +P
Sbjct: 372 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 418
Score = 35.8 bits (81), Expect = 0.091
Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKS-TDTDEDNVTRTEYSDKTTQFPSVYAVPGT 131
TTP++ KEP T+ + PT + + T T E T T+ + T + PS
Sbjct: 460 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 519
Query: 132 EQTEAVGGLSSKPATPKTTTP-------PSSPPPTAVSPEFAYVPADPA 173
T + P P TTP P P PT P +PA
Sbjct: 520 APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA 568
Score = 35.0 bits (79), Expect = 0.16
Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 3/103 (2%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTE 132
TTP++ KEP T+ + PT ++ T T T P A E
Sbjct: 538 TTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 597
Query: 133 QTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
+ P TP+ TP P P PT P +PA
Sbjct: 598 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA 640
Score = 33.1 bits (74), Expect = 0.59
Identities = 61/323 (18%), Positives = 104/323 (32%), Gaps = 49/323 (15%)
Query: 84 KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
KEP T+ + PT +++ T T + P A T S+
Sbjct: 645 KEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTT 704
Query: 144 PATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMP 203
P TTP + P T P P +PA + + P
Sbjct: 705 CDKPAPTTPKGTAPTTPKEPA-PTTPKEPAPTTPK---------------------GTAP 742
Query: 204 VVIKE-VPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAEPSTASS- 261
+KE P++ AP G TS D + E P+T
Sbjct: 743 TTLKEPAPTTPKKPAPKELAPTTTKG---------PTSTTSDKPAPTTPKETAPTTPKEP 793
Query: 262 VPLQDEQEPPAYDQAP-----EVTLQADIEVMSTVHISSVYN--DVPVTEGVVYIEQLPE 314
P ++ P + P EV+ + +T+H S + ++ +E P+
Sbjct: 794 APTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPK 853
Query: 315 QIVIPFTDQVACLK----ENEQSKENEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEE 370
+ +P T A K + K E+ R +P +TT+ K + E+ +
Sbjct: 854 EPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTP-----ETTTAAPKMTKETATTTEKTT 908
Query: 371 NAKYSSVYMEAEATALLSDTSLK 393
+K ++ + +T T K
Sbjct: 909 ESKITATTTQVTSTTTQDTTPFK 931
Score = 32.3 bits (72), Expect = 1.0
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRT--EYSDKTTQFPSVYAVPG 130
TTP++ KEP T+ +S T E + T + T E + T + P+ P
Sbjct: 366 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT----PT 421
Query: 131 TEQTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
T + A P TPK P P P PT P +PA
Sbjct: 422 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 466
Score = 32.0 bits (71), Expect = 1.3
Identities = 22/91 (24%), Positives = 32/91 (35%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQ 133
TT + KEP T+ + PT ++ T T + P A T++
Sbjct: 499 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKK 558
Query: 134 TEAVGGLSSKPATPKTTTPPSSPPPTAVSPE 164
P TPK T P + T +PE
Sbjct: 559 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 589
Score = 31.6 bits (70), Expect = 1.7
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEKS--TDTDEDNVTRTEYSDKTTQFPSVYAVPGT 131
TT + KEP T+ + PT ++ T T E T T+ + T + P+ P T
Sbjct: 343 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA----PTT 398
Query: 132 EQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPE 164
+ A P TPK P + PT +P+
Sbjct: 399 PKKPA-------PTTPKEPAPTTPKEPTPTTPK 424
Score = 29.6 bits (65), Expect = 6.6
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 5/141 (3%)
Query: 27 KTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVKQFHQIK-VEKWS-EGTTPQKKLECLK 84
K +N+ +E T T+ D K+ + + +EK S + P K+
Sbjct: 231 KETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKP 290
Query: 85 EP-GKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
P +T+ + T ++ T T T + T ++ + P T + A S
Sbjct: 291 TPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPT--TIKSAPTTPKEPAPTTTKSA 348
Query: 144 PATPKTTTPPSSPPPTAVSPE 164
P TPK P ++ P +P+
Sbjct: 349 PTTPKEPAPTTTKEPAPTTPK 369
Score = 29.3 bits (64), Expect = 8.6
Identities = 32/136 (23%), Positives = 47/136 (34%), Gaps = 17/136 (12%)
Query: 51 TTMDIKDLVKQFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQ--MEKSTDTDED 108
TT++ K+ Q + E TT K+ + ++ KTS + PT + K T E
Sbjct: 241 TTVETKETTTTNKQTSTDG-KEKTTSAKETQSIE---KTSAKDLAPTSKVLAKPTPKAET 296
Query: 109 NVTRTEYSDKTTQFPSVYAVPG--TEQTEAVGGLSSKPATPKTTTP---------PSSPP 157
+ P+ P T + + S P TPK P P P
Sbjct: 297 TTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPA 356
Query: 158 PTAVSPEFAYVPADPA 173
PT P +PA
Sbjct: 357 PTTTKEPAPTTPKEPA 372
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 38.9 bits (89), Expect = 0.011
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 16/112 (14%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEK---STDTDEDNVTRTEYSDKTTQFPSVYAVPG 130
TTP++ KEP T+ + PT +K +T + T E + TT+ PS P
Sbjct: 462 TTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPS----PT 517
Query: 131 TEQTEAVGGLSSKPATPKTTTP---------PSSPPPTAVSPEFAYVPADPA 173
T + A S P T K P P P PT P +PA
Sbjct: 518 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 569
Score = 37.7 bits (86), Expect = 0.024
Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 2/92 (2%)
Query: 84 KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
KEP T+ + PT +K T T + + T P A E+
Sbjct: 606 KEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA 665
Query: 144 PATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
P TPK P P P PT P +PA
Sbjct: 666 PTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 697
Score = 37.7 bits (86), Expect = 0.024
Identities = 71/363 (19%), Positives = 118/363 (32%), Gaps = 49/363 (13%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTE 132
TTP++ KE T+ + PT +++ T E + TT+ P+
Sbjct: 691 TTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPA 750
Query: 133 QTEAVGGLSSKPATPKTTTP----PSSPPPTAVSPEFAYVPADPAQLAAQML------GK 182
T G + P P TTP P++P TA + P P + A + L G
Sbjct: 751 PTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGP 810
Query: 183 VSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVH 242
S+ + + A + P + A P S T++H
Sbjct: 811 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIH 870
Query: 243 -------VDLGSQPKENEAE--------PSTASSVPLQDEQEPPAYDQ--------APEV 279
+L ++P E P+T + + E A D+ PE
Sbjct: 871 KSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPET 930
Query: 280 TLQADIEVMSTVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQS 339
T A T + + +T + Q PF ++ LK +
Sbjct: 931 TTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPF--KITTLK----------T 978
Query: 340 PRVSPKSVVEK---TTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQP 396
++PK K TT+ + K E+ K N+K ++ + A TS K
Sbjct: 979 TTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPK 1038
Query: 397 EVP 399
+P
Sbjct: 1039 TMP 1041
Score = 36.2 bits (82), Expect = 0.070
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 8/107 (7%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKS-TDTDEDNVTRTEYSDKTTQFPSVYA---- 127
TTP++ KEP T+++S T E + T T T E + TT+ P+
Sbjct: 353 TTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEP 412
Query: 128 VPGTEQTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADP 172
P T + A S P TPK P P P PT P +P
Sbjct: 413 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 459
Score = 35.8 bits (81), Expect = 0.091
Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKS-TDTDEDNVTRTEYSDKTTQFPSVYAVPGT 131
TTP++ KEP T+ + PT + + T T E T T+ + T + PS
Sbjct: 501 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 560
Query: 132 EQTEAVGGLSSKPATPKTTTP-------PSSPPPTAVSPEFAYVPADPA 173
T + P P TTP P P PT P +PA
Sbjct: 561 APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA 609
Score = 35.0 bits (79), Expect = 0.16
Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 3/103 (2%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTE 132
TTP++ KEP T+ + PT ++ T T T P A E
Sbjct: 579 TTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 638
Query: 133 QTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
+ P TP+ TP P P PT P +PA
Sbjct: 639 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA 681
Score = 33.1 bits (74), Expect = 0.59
Identities = 61/323 (18%), Positives = 104/323 (32%), Gaps = 49/323 (15%)
Query: 84 KEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
KEP T+ + PT +++ T T + P A T S+
Sbjct: 686 KEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTT 745
Query: 144 PATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMP 203
P TTP + P T P P +PA + + P
Sbjct: 746 CDKPAPTTPKGTAPTTPKEPA-PTTPKEPAPTTPK---------------------GTAP 783
Query: 204 VVIKE-VPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAEPSTASS- 261
+KE P++ AP G TS D + E P+T
Sbjct: 784 TTLKEPAPTTPKKPAPKELAPTTTKG---------PTSTTSDKPAPTTPKETAPTTPKEP 834
Query: 262 VPLQDEQEPPAYDQAP-----EVTLQADIEVMSTVHISSVYN--DVPVTEGVVYIEQLPE 314
P ++ P + P EV+ + +T+H S + ++ +E P+
Sbjct: 835 APTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPK 894
Query: 315 QIVIPFTDQVACLK----ENEQSKENEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEE 370
+ +P T A K + K E+ R +P +TT+ K + E+ +
Sbjct: 895 EPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTP-----ETTTAAPKMTKETATTTEKTT 949
Query: 371 NAKYSSVYMEAEATALLSDTSLK 393
+K ++ + +T T K
Sbjct: 950 ESKITATTTQVTSTTTQDTTPFK 972
Score = 32.3 bits (72), Expect = 1.0
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Query: 74 TTPQKKLECL-KEPGKTSVESKVPTQMEKSTDTDEDNVTRT--EYSDKTTQFPSVYAVPG 130
TTP++ KEP T+ +S T E + T + T E + T + P+ P
Sbjct: 407 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT----PT 462
Query: 131 TEQTEAVGGLSSKPATPKTTTP--PSSPPPTAVSPEFAYVPADPA 173
T + A P TPK P P P PT P +PA
Sbjct: 463 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 507
Score = 32.0 bits (71), Expect = 1.3
Identities = 22/91 (24%), Positives = 32/91 (35%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQ 133
TT + KEP T+ + PT ++ T T + P A T++
Sbjct: 540 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKK 599
Query: 134 TEAVGGLSSKPATPKTTTPPSSPPPTAVSPE 164
P TPK T P + T +PE
Sbjct: 600 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 630
Score = 31.6 bits (70), Expect = 1.7
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 74 TTPQKKLECLKEPGKTSVESKVPTQMEKS--TDTDEDNVTRTEYSDKTTQFPSVYAVPGT 131
TT + KEP T+ + PT ++ T T E T T+ + T + P+ P T
Sbjct: 384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA----PTT 439
Query: 132 EQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPE 164
+ A P TPK P + PT +P+
Sbjct: 440 PKKPA-------PTTPKEPAPTTPKEPTPTTPK 465
Score = 29.6 bits (65), Expect = 6.6
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 5/141 (3%)
Query: 27 KTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVKQFHQIK-VEKWS-EGTTPQKKLECLK 84
K +N+ +E T T+ D K+ + + +EK S + P K+
Sbjct: 272 KETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKP 331
Query: 85 EP-GKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSK 143
P +T+ + T ++ T T T + T ++ + P T + A S
Sbjct: 332 TPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPT--TIKSAPTTPKEPAPTTTKSA 389
Query: 144 PATPKTTTPPSSPPPTAVSPE 164
P TPK P ++ P +P+
Sbjct: 390 PTTPKEPAPTTTKEPAPTTPK 410
Score = 29.3 bits (64), Expect = 8.6
Identities = 32/136 (23%), Positives = 47/136 (34%), Gaps = 17/136 (12%)
Query: 51 TTMDIKDLVKQFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQ--MEKSTDTDED 108
TT++ K+ Q + E TT K+ + ++ KTS + PT + K T E
Sbjct: 282 TTVETKETTTTNKQTSTDG-KEKTTSAKETQSIE---KTSAKDLAPTSKVLAKPTPKAET 337
Query: 109 NVTRTEYSDKTTQFPSVYAVPG--TEQTEAVGGLSSKPATPKTTTP---------PSSPP 157
+ P+ P T + + S P TPK P P P
Sbjct: 338 TTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPA 397
Query: 158 PTAVSPEFAYVPADPA 173
PT P +PA
Sbjct: 398 PTTTKEPAPTTPKEPA 413
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 38.9 bits (89), Expect = 0.011
Identities = 76/377 (20%), Positives = 124/377 (32%), Gaps = 24/377 (6%)
Query: 116 SDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQL 175
S TT FP +PG Q S P + TT P S +++ PE + P
Sbjct: 1728 STHTTAFPGSTTMPGVSQESTAS--HSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGST 1785
Query: 176 AAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQV 235
+L ++ V +T P S + S K
Sbjct: 1786 ETTLLPDNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPSSKDTMPAP 1845
Query: 236 VNQTSVHVDLGS----QPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMST- 290
TS V+L + P +ASS L +E +P T ST
Sbjct: 1846 PTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTT 1905
Query: 291 ---VHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSV 347
V S+ Y+ P G PE + + + + SP + ++
Sbjct: 1906 SGLVEESTAYHSSP---GSTQTMHFPESSTASGRSEES-RTSHSSTTHTISSPPSTTSAL 1961
Query: 348 VEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEG 407
VE+ TS S S S +++ S E+TA S G +PA+ +
Sbjct: 1962 VEEPTSYHS--SPGSTATTHFPDSSTTSG--RSEESTASHSSQDATGTIVLPAR---STT 2014
Query: 408 AIKIGSEKSLHL---EVEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTS 464
++ +G + + +E T++ T S +++ P + A SG S
Sbjct: 2015 SVLLGESTTSPISSGSMETTALPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVS 2074
Query: 465 VKSSSGPFPPAPEGLTA 481
+S++ P TA
Sbjct: 2075 EESTTSHSRPGSTHTTA 2091
Score = 38.1 bits (87), Expect = 0.018
Identities = 72/377 (19%), Positives = 119/377 (31%), Gaps = 24/377 (6%)
Query: 116 SDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQL 175
S TT FP +PG Q S P + TT P S +++ PE + P
Sbjct: 3285 STHTTAFPGSTTMPGVSQESTAS--HSSPGSTDTTLSPGSTTASSLGPESTTFHSGPGST 3342
Query: 176 AAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQV 235
+L ++ V +T P S + + K
Sbjct: 3343 ETTLLPDNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPNSKDTTPAP 3402
Query: 236 VNQTSVHVDLGS----QPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMST- 290
TS V+L + P +ASS L +E +P T ST
Sbjct: 3403 PTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTT 3462
Query: 291 ---VHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSV 347
V S+ Y+ P G PE + + + + +P + V
Sbjct: 3463 SGLVEESTTYHSSP---GSTQTMHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALV 3519
Query: 348 VEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEG 407
E T+ S S + + S E+TA S G +PA+ +
Sbjct: 3520 EEPTSYHSSPGSTATTHFPDSSTTSGRSE-----ESTASHSSQDATGTIVLPAR---STT 3571
Query: 408 AIKIGSEKSLHL---EVEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTS 464
++ +G + + +E T++ T S +++ P + A SG S
Sbjct: 3572 SVLLGESTTSPISSGSMETTALPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVS 3631
Query: 465 VKSSSGPFPPAPEGLTA 481
+S++ P TA
Sbjct: 3632 EESTTSHSRPGSTHTTA 3648
Score = 35.0 bits (79), Expect = 0.16
Identities = 79/367 (21%), Positives = 125/367 (34%), Gaps = 83/367 (22%)
Query: 119 TTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQ 178
TT FPS +PG Q S P + TT P S +++ PE + P
Sbjct: 4371 TTAFPSSTTMPGVSQESTAS--HSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETT 4428
Query: 179 MLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKVLEVQVVNQ 238
+L P + A ++ A+ V S +
Sbjct: 4429 LL-----------------------------PDNTTASGLLEASTPVHS---------ST 4450
Query: 239 TSVHVDL---GSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISS 295
S H L GS ++ E+ +T S P + P AP T A +E+ +T H S
Sbjct: 4451 GSPHTTLSPAGSTTRQGES--TTFQSWPNSKDTTP-----APPTTTSAFVELSTTSHGSP 4503
Query: 296 VYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSP--RVSPKSVVEKTTS 353
+ P T F+ L +E+S SP + S TTS
Sbjct: 4504 --SSTPTTH---------------FSASSTTLGRSEESTTVHSSPVATATTPSPARSTTS 4546
Query: 354 GMSKKSVE------SVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEG 407
G+ ++S S + E+ S E+ + + ++ P + L++
Sbjct: 4547 GLVEESTTYHSSPGSTQTMHFPESNTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPT 4606
Query: 408 AI--KIGSEKSLHLEVEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSV 465
+ GS + H T+ + EES + Q+ G VL + +V G S
Sbjct: 4607 SYHSSPGSTATTHFPDSSTT----SGRSEESTASHSSQDATGTIVLPARSTTSVLLGEST 4662
Query: 466 KS--SSG 470
S SSG
Sbjct: 4663 TSPISSG 4669
Score = 33.9 bits (76), Expect = 0.35
Identities = 81/413 (19%), Positives = 132/413 (31%), Gaps = 81/413 (19%)
Query: 95 VPTQMEKSTDTDEDNVTRTEY-SDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPP 153
+P M S ++E + + S TT FP +PG Q S P TT P
Sbjct: 651 LPASMTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGLSQESTAS--HSSPGPTDTTLSP 708
Query: 154 SSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSE 213
S +++ PE+ + P +L P +
Sbjct: 709 GSTTASSLGPEYTTFHSRPGSTETTLL-----------------------------PDNT 739
Query: 214 AAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDL---GSQPKENEAEPSTASSVPLQDEQEP 270
A ++ A+ V S + S H L GS ++ E+ +T S P + P
Sbjct: 740 TASGLLEASMPVHS---------STRSPHTTLSPAGSTTRQGES--TTFHSWPSSKDTRP 788
Query: 271 PAYDQAPEVTLQADIEVMSTVHISSVYNDVPVTEGVV------YIEQLPEQIVIPFTDQV 324
AP T A +E +T H S + +P T +E+ P + Q
Sbjct: 789 -----APPTTTSAFVEPSTTSHGSP--SSIPTTHISARSTTSGLVEESTTYHSSPGSTQT 841
Query: 325 ACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEAT 384
E++ + + S S +S S S A +EE Y S T
Sbjct: 842 MHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTS------ALVEEPTSYHSSPGSTATT 895
Query: 385 ALLSDTSLKGQPE---VPAQLLDAEGAIKIGSEKSLHL-------------EVEITSIVS 428
++ G+ E DA G I + + + + +E T++
Sbjct: 896 HFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPG 955
Query: 429 DNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLTA 481
T S ++ P + A SG S +S++ P TA
Sbjct: 956 STTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTA 1008
Score = 30.4 bits (67), Expect = 3.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Query: 71 SEGTTP--QKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEY-SDKTTQFPSVYA 127
S TTP K L ++ ++ P M S+ + E ++ S TT FP+
Sbjct: 4870 STATTPGLSAKSTILYSSSRSPDQTLSPASMTSSSISGEPTSLYSQAESTHTTAFPASTT 4929
Query: 128 VPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADP 172
G Q SKP + +TT P S ++ + EF + P
Sbjct: 4930 TSGLSQESTT--FHSKPGSTETTLSPGSITTSSFAQEFTTPHSQP 4972
>gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 38.9 bits (89), Expect = 0.011
Identities = 68/327 (20%), Positives = 122/327 (37%), Gaps = 55/327 (16%)
Query: 69 KWSEGTTPQKKLECLKEPGKT--SVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVY 126
K SE T K+ + K P +T S + +P EK+ E N+ ++ S K Q P +
Sbjct: 39 KSSEETIQPKEGDIPKAPEETIQSKKEDLPKSSEKAIQPKESNIPKS--SAKPIQ-PKLG 95
Query: 127 AVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPT--------------AVSPEFAYVPADP 172
+P S KP+ PK P +P T A+ P+ +P
Sbjct: 96 NIPKA---------SVKPSQPKEGDIPKAPEETIQSKKEDLPKSSEEAIQPKEGDIPKSS 146
Query: 173 AQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIK----EVPSSEAAEDVMVAAPLVCSG 228
A+ LG ++ S D+ S I+ ++P S S
Sbjct: 147 AKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQPKEGDIPKS--------------SA 192
Query: 229 KVLEVQVVNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVM 288
K ++ ++ N V SQPKE + S ++ ++ P + ++A + + DI
Sbjct: 193 KPIQPKLGNIPKASVK-PSQPKEGDISKSPEEAIQPKEGDLPKSLEEAIQ-PKEGDIPKS 250
Query: 289 STVHISSVYNDVPVT-EGVVY-----IEQLPEQIVIPFTDQVACLKENEQSKENEQSPRV 342
I D+P + E + I + PE+ + P + E + P+
Sbjct: 251 PEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAIQPKEGDIPK- 309
Query: 343 SPKSVVEKTTSGMSKKSVESVKLAQLE 369
SPK ++ + K E++ +++
Sbjct: 310 SPKQAIQPKEGDIPKSLEEAIPPKEID 336
Score = 36.2 bits (82), Expect = 0.070
Identities = 63/272 (23%), Positives = 103/272 (37%), Gaps = 35/272 (12%)
Query: 94 KVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPP 153
K P + +S D + K P A P + + S KP+ PK + P
Sbjct: 114 KAPEETIQSKKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIP 173
Query: 154 SSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVI--KEVPS 211
SP T + P+ +P A+ LG + S D++ S I KE
Sbjct: 174 KSPEET-IQPKEGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISKSPEEAIQPKEGDL 232
Query: 212 SEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKE-NEAEPSTASSVPLQDEQ-- 268
++ E+ + K ++ + ++ G PK EA +P E+
Sbjct: 233 PKSLEEAI-------QPKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETI 285
Query: 269 EPPAYD--QAPEVTLQ---ADIEVMSTVHISSVYNDVPVTEGVVYIEQL--PEQIVIPFT 321
+P D ++PE +Q DI I D+P + +E+ P++I IP +
Sbjct: 286 QPKKGDIPKSPEEAIQPKEGDIPKSPKQAIQPKEGDIPKS-----LEEAIPPKEIDIPKS 340
Query: 322 DQVACLKENEQSKENEQSPRVSPKSVVEKTTS 353
+ E Q KE++ SPKS+ E T S
Sbjct: 341 PE-----ETIQPKEDD-----SPKSLEEATPS 362
>gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo
sapiens]
Length = 553
Score = 38.9 bits (89), Expect = 0.011
Identities = 68/327 (20%), Positives = 122/327 (37%), Gaps = 55/327 (16%)
Query: 69 KWSEGTTPQKKLECLKEPGKT--SVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVY 126
K SE T K+ + K P +T S + +P EK+ E N+ ++ S K Q P +
Sbjct: 106 KSSEETIQPKEGDIPKAPEETIQSKKEDLPKSSEKAIQPKESNIPKS--SAKPIQ-PKLG 162
Query: 127 AVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPT--------------AVSPEFAYVPADP 172
+P S KP+ PK P +P T A+ P+ +P
Sbjct: 163 NIPKA---------SVKPSQPKEGDIPKAPEETIQSKKEDLPKSSEEAIQPKEGDIPKSS 213
Query: 173 AQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIK----EVPSSEAAEDVMVAAPLVCSG 228
A+ LG ++ S D+ S I+ ++P S S
Sbjct: 214 AKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQPKEGDIPKS--------------SA 259
Query: 229 KVLEVQVVNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVM 288
K ++ ++ N V SQPKE + S ++ ++ P + ++A + + DI
Sbjct: 260 KPIQPKLGNIPKASVK-PSQPKEGDISKSPEEAIQPKEGDLPKSLEEAIQ-PKEGDIPKS 317
Query: 289 STVHISSVYNDVPVT-EGVVY-----IEQLPEQIVIPFTDQVACLKENEQSKENEQSPRV 342
I D+P + E + I + PE+ + P + E + P+
Sbjct: 318 PEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAIQPKEGDIPK- 376
Query: 343 SPKSVVEKTTSGMSKKSVESVKLAQLE 369
SPK ++ + K E++ +++
Sbjct: 377 SPKQAIQPKEGDIPKSLEEAIPPKEID 403
Score = 36.2 bits (82), Expect = 0.070
Identities = 63/272 (23%), Positives = 103/272 (37%), Gaps = 35/272 (12%)
Query: 94 KVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPP 153
K P + +S D + K P A P + + S KP+ PK + P
Sbjct: 181 KAPEETIQSKKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIP 240
Query: 154 SSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVI--KEVPS 211
SP T + P+ +P A+ LG + S D++ S I KE
Sbjct: 241 KSPEET-IQPKEGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISKSPEEAIQPKEGDL 299
Query: 212 SEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKE-NEAEPSTASSVPLQDEQ-- 268
++ E+ + K ++ + ++ G PK EA +P E+
Sbjct: 300 PKSLEEAI-------QPKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETI 352
Query: 269 EPPAYD--QAPEVTLQ---ADIEVMSTVHISSVYNDVPVTEGVVYIEQL--PEQIVIPFT 321
+P D ++PE +Q DI I D+P + +E+ P++I IP +
Sbjct: 353 QPKKGDIPKSPEEAIQPKEGDIPKSPKQAIQPKEGDIPKS-----LEEAIPPKEIDIPKS 407
Query: 322 DQVACLKENEQSKENEQSPRVSPKSVVEKTTS 353
+ E Q KE++ SPKS+ E T S
Sbjct: 408 PE-----ETIQPKEDD-----SPKSLEEATPS 429
>gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 38.9 bits (89), Expect = 0.011
Identities = 68/327 (20%), Positives = 122/327 (37%), Gaps = 55/327 (16%)
Query: 69 KWSEGTTPQKKLECLKEPGKT--SVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVY 126
K SE T K+ + K P +T S + +P EK+ E N+ ++ S K Q P +
Sbjct: 39 KSSEETIQPKEGDIPKAPEETIQSKKEDLPKSSEKAIQPKESNIPKS--SAKPIQ-PKLG 95
Query: 127 AVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPT--------------AVSPEFAYVPADP 172
+P S KP+ PK P +P T A+ P+ +P
Sbjct: 96 NIPKA---------SVKPSQPKEGDIPKAPEETIQSKKEDLPKSSEEAIQPKEGDIPKSS 146
Query: 173 AQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIK----EVPSSEAAEDVMVAAPLVCSG 228
A+ LG ++ S D+ S I+ ++P S S
Sbjct: 147 AKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQPKEGDIPKS--------------SA 192
Query: 229 KVLEVQVVNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVM 288
K ++ ++ N V SQPKE + S ++ ++ P + ++A + + DI
Sbjct: 193 KPIQPKLGNIPKASVK-PSQPKEGDISKSPEEAIQPKEGDLPKSLEEAIQ-PKEGDIPKS 250
Query: 289 STVHISSVYNDVPVT-EGVVY-----IEQLPEQIVIPFTDQVACLKENEQSKENEQSPRV 342
I D+P + E + I + PE+ + P + E + P+
Sbjct: 251 PEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAIQPKEGDIPK- 309
Query: 343 SPKSVVEKTTSGMSKKSVESVKLAQLE 369
SPK ++ + K E++ +++
Sbjct: 310 SPKQAIQPKEGDIPKSLEEAIPPKEID 336
Score = 36.2 bits (82), Expect = 0.070
Identities = 63/272 (23%), Positives = 103/272 (37%), Gaps = 35/272 (12%)
Query: 94 KVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPP 153
K P + +S D + K P A P + + S KP+ PK + P
Sbjct: 114 KAPEETIQSKKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIP 173
Query: 154 SSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVI--KEVPS 211
SP T + P+ +P A+ LG + S D++ S I KE
Sbjct: 174 KSPEET-IQPKEGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISKSPEEAIQPKEGDL 232
Query: 212 SEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKE-NEAEPSTASSVPLQDEQ-- 268
++ E+ + K ++ + ++ G PK EA +P E+
Sbjct: 233 PKSLEEAI-------QPKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETI 285
Query: 269 EPPAYD--QAPEVTLQ---ADIEVMSTVHISSVYNDVPVTEGVVYIEQL--PEQIVIPFT 321
+P D ++PE +Q DI I D+P + +E+ P++I IP +
Sbjct: 286 QPKKGDIPKSPEEAIQPKEGDIPKSPKQAIQPKEGDIPKS-----LEEAIPPKEIDIPKS 340
Query: 322 DQVACLKENEQSKENEQSPRVSPKSVVEKTTS 353
+ E Q KE++ SPKS+ E T S
Sbjct: 341 PE-----ETIQPKEDD-----SPKSLEEATPS 362
>gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]
Length = 1460
Score = 38.5 bits (88), Expect = 0.014
Identities = 84/396 (21%), Positives = 147/396 (37%), Gaps = 64/396 (16%)
Query: 130 GTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVS----PEFAYVPADPAQLAAQMLGKVSS 185
GT+ A+ +++ PA K T PS+ PTA S P+ +P+ P Q+ K+
Sbjct: 255 GTKSMAALTVMAAAPAGMKGITQPSAFIPTAESNSFQPQVKTLPS-PIDAKQQLQRKIQK 313
Query: 186 IHSDQ--------------SDVLMVDVATSMP-------------VVIKEVPSSEAAEDV 218
+Q S+ + T++P +V+ VPS +
Sbjct: 314 KQQEQKLQSPLPGESAAKKSESATSNGVTNLPNGNPSILSPQPIGIVVAAVPSPIPVQRT 373
Query: 219 --MVAAPLVCS---GKV--LEVQVVNQTSVHVDLGSQPKEN-EAEPSTASSVPLQDEQEP 270
+V +P S GKV L VQVV Q V + +N A P S + Q
Sbjct: 374 RQLVTSPSPMSSSDGKVLPLNVQVVTQHMQSVKQAPKTPQNVPASPGGDRSARHRYPQIL 433
Query: 271 PAYDQAPEVTLQADIEVMST-----------VHISSVYNDVPVTEGVVYIEQLPEQIVIP 319
P +T+++ V+ T H+SS+ N V +T I P P
Sbjct: 434 PKPANTSALTIRSPTTVLFTSSPIKTAVVPASHMSSL-NVVKMTT----ISLTPSNSNTP 488
Query: 320 FTDQVACLKENEQSKENEQSPRVSPKSVVEKTTSGMSKKSVESVKLAQLEENAKYSSVYM 379
+ ++E+ P++ SVV + G S +++ + SS
Sbjct: 489 LKHSASVSSATGTTEESRSVPQIKNGSVVSLQSPGSRSSSAGGTSAVEVKVEPETSS--- 545
Query: 380 EAEATALLSDTSLKGQPEVPAQLL----DAEGAIKIGSEKSLHLEVEITSIVSDNTGQEE 435
+ ++ P+ P+ LL + +GA++ S + + +E++ T + T +
Sbjct: 546 DEHPVQCQENSDEAKAPQTPSALLGQKSNTDGALQKPSNEGV-IEIKATKVCDQRTKCKS 604
Query: 436 SGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGP 471
+P G + + A + T SSS P
Sbjct: 605 RCNEMLPGTSTGNNQSTITLSVASQNLTFTSSSSPP 640
>gi|33350928 disabled homolog 1 [Homo sapiens]
Length = 555
Score = 38.1 bits (87), Expect = 0.018
Identities = 56/236 (23%), Positives = 90/236 (38%), Gaps = 39/236 (16%)
Query: 53 MDIKDLVKQFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKV--PTQMEKSTDTDEDNV 110
+D++DL + +++K + E QK +C + +T +E V P + + +
Sbjct: 152 LDLRDLFQLIYELKQREELEKKA-QKDKQCEQAVYQTILEEDVEDPVYQYIVFEAGHEPI 210
Query: 111 TRTEYSDKTTQFPS------VYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPE 164
E + Q P+ VY VP ++ AV L +T P + PPT +P
Sbjct: 211 RDPETEENIYQVPTSQKKEGVYDVPKSQPVSAVTQLEL--FGDMSTPPDITSPPTPATPG 268
Query: 165 FAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAA-- 222
A++P+ L A DV +S+P VPS A ++ +
Sbjct: 269 DAFIPSSSQTLPAS-----------------ADVFSSVPFGTAAVPSGYVAMGAVLPSFW 311
Query: 223 ---PLVCSGKVLEVQVVNQTSVHVDLGSQP---KENEAEPSTASSVPLQDEQEPPA 272
PLV V+ Q V G+QP + P+T P Q PPA
Sbjct: 312 GQQPLVQQQMVMGAQ---PPVAQVMPGAQPIAWGQPGLFPATQQPWPTVAGQFPPA 364
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 38.1 bits (87), Expect = 0.018
Identities = 64/273 (23%), Positives = 109/273 (39%), Gaps = 46/273 (16%)
Query: 249 PKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDVPVTEGVVY 308
P + +P + P Q P+Y Q P+ ++ S+ Y+ P
Sbjct: 476 PHPQQQQPPYSQQPPSQTPHAQPSYQQQPQ---SQPPQLQSS---QPPYSQQP------- 522
Query: 309 IEQLP-EQIVIPFTDQVACLKENEQSKE-----------NEQSPRVSPKSVVEKTTSGMS 356
Q P +Q P+ Q + +++ QS+ +Q P+ S + + +
Sbjct: 523 -SQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQ 581
Query: 357 KKSVESVKLAQLEEN----AKYSSVYMEAEATALLSDTSLKGQPE--------VPAQLLD 404
+S +S + A ++ + S ++A++ S TS KG E P+ L D
Sbjct: 582 PQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPD 641
Query: 405 AEGAI---KIGSEKSLHLEVEITSIVSDNTGQEESGENS--VPQEMEGKPVLSGEAAEAV 459
G+I +G+E +L V TS +S + G++ + S P P + G + V
Sbjct: 642 LSGSIDDLPMGTEGALSPGVS-TSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPV 700
Query: 460 HSGTSV-KSSSGPFPPAP-EGLTAPEIEPEGES 490
S SV +S SGP PA G P P G+S
Sbjct: 701 GSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQS 733
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 38.1 bits (87), Expect = 0.018
Identities = 64/273 (23%), Positives = 109/273 (39%), Gaps = 46/273 (16%)
Query: 249 PKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDVPVTEGVVY 308
P + +P + P Q P+Y Q P+ ++ S+ Y+ P
Sbjct: 476 PHPQQQQPPYSQQPPSQTPHAQPSYQQQPQ---SQPPQLQSS---QPPYSQQP------- 522
Query: 309 IEQLP-EQIVIPFTDQVACLKENEQSKE-----------NEQSPRVSPKSVVEKTTSGMS 356
Q P +Q P+ Q + +++ QS+ +Q P+ S + + +
Sbjct: 523 -SQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQ 581
Query: 357 KKSVESVKLAQLEEN----AKYSSVYMEAEATALLSDTSLKGQPE--------VPAQLLD 404
+S +S + A ++ + S ++A++ S TS KG E P+ L D
Sbjct: 582 PQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPD 641
Query: 405 AEGAI---KIGSEKSLHLEVEITSIVSDNTGQEESGENS--VPQEMEGKPVLSGEAAEAV 459
G+I +G+E +L V TS +S + G++ + S P P + G + V
Sbjct: 642 LSGSIDDLPMGTEGALSPGVS-TSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPV 700
Query: 460 HSGTSV-KSSSGPFPPAP-EGLTAPEIEPEGES 490
S SV +S SGP PA G P P G+S
Sbjct: 701 GSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQS 733
>gi|237681125 breast cancer 1, early onset isoform 5 [Homo sapiens]
Length = 699
Score = 37.7 bits (86), Expect = 0.024
Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 66/263 (25%)
Query: 238 QTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQA---------DIEVM 288
+TSV+++LGS E+ +T SV Q+ + E++L + + +V
Sbjct: 175 KTSVYIELGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDVT 234
Query: 289 STVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVV 348
+T H ND+ TE E+ PE+ + + A E+E S V
Sbjct: 235 NTEHHQPSNNDLNTTEKRA-AERHPEK----YQGEAASGCESETS--------------V 275
Query: 349 EKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGA 408
+ SG+S +S + Q + +++ + ++ E L + +L+ G+
Sbjct: 276 SEDCSGLSSQS--DILTTQQRDTMQHNLIKLQQEMAELEA-------------VLEQHGS 320
Query: 409 IKIGSEKSLHLEVEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSS 468
S SI+SD++ E+ P++ + VL TS KSS
Sbjct: 321 QPSNS---------YPSIISDSSALEDLRN---PEQSTSEKVL-----------TSQKSS 357
Query: 469 SGPFPPAPEGLTAPEIEPEGEST 491
P PEGL+A + E +S+
Sbjct: 358 EYPISQNPEGLSADKFEVSADSS 380
>gi|237681123 breast cancer 1, early onset isoform 4 [Homo sapiens]
Length = 759
Score = 37.7 bits (86), Expect = 0.024
Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 66/263 (25%)
Query: 238 QTSVHVDLGSQPKENEAEPSTASSVPLQDEQEPPAYDQAPEVTLQA---------DIEVM 288
+TSV+++LGS E+ +T SV Q+ + E++L + + +V
Sbjct: 175 KTSVYIELGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDVT 234
Query: 289 STVHISSVYNDVPVTEGVVYIEQLPEQIVIPFTDQVACLKENEQSKENEQSPRVSPKSVV 348
+T H ND+ TE E+ PE+ + + A E+E S V
Sbjct: 235 NTEHHQPSNNDLNTTEKRA-AERHPEK----YQGEAASGCESETS--------------V 275
Query: 349 EKTTSGMSKKSVESVKLAQLEENAKYSSVYMEAEATALLSDTSLKGQPEVPAQLLDAEGA 408
+ SG+S +S + Q + +++ + ++ E L + +L+ G+
Sbjct: 276 SEDCSGLSSQS--DILTTQQRDTMQHNLIKLQQEMAELEA-------------VLEQHGS 320
Query: 409 IKIGSEKSLHLEVEITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSS 468
S SI+SD++ E+ P++ + VL TS KSS
Sbjct: 321 QPSNS---------YPSIISDSSALEDLRN---PEQSTSEKVL-----------TSQKSS 357
Query: 469 SGPFPPAPEGLTAPEIEPEGEST 491
P PEGL+A + E +S+
Sbjct: 358 EYPISQNPEGLSADKFEVSADSS 380
>gi|11641239 hypothetical protein LOC53838 [Homo sapiens]
Length = 449
Score = 37.7 bits (86), Expect = 0.024
Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 20/170 (11%)
Query: 116 SDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPA-- 173
S Q P A+P +T + L+++ T TT SSP T SP ++P+D A
Sbjct: 189 STALAQVPKSSALP---RTATLATLATRAQTVATTANTSSPMSTRPSPS-KHMPSDTAAS 244
Query: 174 ---QLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEAAEDVMVAAPLVCSGKV 230
+ Q G +S + DQ V + +T MP P+ P V +
Sbjct: 245 PVPPMRPQAQGPISQVSVDQPVVNTTNKSTPMPSNTTPEPA---------PTPTVVTTTK 295
Query: 231 LEVQVVNQTSVHVDLGSQPKENEA-EPST-ASSVPLQDEQEPPAYDQAPE 278
+ + + V V S E EA P+T S +P P QAPE
Sbjct: 296 AQAREPTASPVPVPHTSPIPEMEAMSPTTQPSPMPYTQRAAGPGTSQAPE 345
Score = 32.0 bits (71), Expect = 1.3
Identities = 46/207 (22%), Positives = 74/207 (35%), Gaps = 15/207 (7%)
Query: 94 KVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQ--TEAVGGL---SSKPATPK 148
+V T+ TD E + T+ P+ A T T A + SS P T
Sbjct: 78 EVTTEDTSRTDVSEPATSGGAADGVTSIAPTAVASSTTAASITTAASSMTVASSAPTTAA 137
Query: 149 TTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKE 208
++T +S PT + + P LA L +S + ++ S+ + +
Sbjct: 138 SSTTVASIAPTTAASSMTAASSTPMTLA---LPAPTSTSTGRTPSTTATGHPSLSTALAQ 194
Query: 209 VPSSEAAEDVMVAAPLVCSGKVLEVQVVNQTSVHVDLGSQPKENEAEPSTASSVPLQDEQ 268
VP S A A L + V TS + P ++ + AS VP Q
Sbjct: 195 VPKSSALPRTATLATLATRAQT--VATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRPQ 252
Query: 269 EPPAYDQAPEVTLQADIEVMSTVHISS 295
Q P + D V++T + S+
Sbjct: 253 A-----QGPISQVSVDQPVVNTTNKST 274
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.304 0.122 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,039,075
Number of Sequences: 37866
Number of extensions: 992052
Number of successful extensions: 6259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 272
Number of HSP's that attempted gapping in prelim test: 5273
Number of HSP's gapped (non-prelim): 1157
length of query: 493
length of database: 18,247,518
effective HSP length: 106
effective length of query: 387
effective length of database: 14,233,722
effective search space: 5508450414
effective search space used: 5508450414
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.