Guide to the Human Genome
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Name: CABYR Sequence: fasta or formatted (281aa) NCBI GI: 24797110
Description:

calcium-binding tyrosine phosphorylation-regulated protein isoform d

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [493aa] calcium-binding tyrosine phosphorylation-regulated protein isoform a
alt prot [379aa] calcium-binding tyrosine phosphorylation-regulated protein isoform c
alt prot [475aa] calcium-binding tyrosine phosphorylation-regulated protein isoform b
alt prot [379aa] calcium-binding tyrosine phosphorylation-regulated protein isoform c
alt prot [221aa] calcium-binding tyrosine phosphorylation-regulated protein isoform e
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         26           2
 C cysteine            1.1          3           1
 D aspartate           4.6         13           1
 E glutamate           4.6         13           1
 F phenylalanine       3.2          9           1
 G glycine             5.7         16           2
 H histidine           1.8          5           1
 I isoleucine          1.1          3           1
 K lysine              6.4         18           2
 L leucine             4.3         12           1
 M methionine          2.1          6           1
 N asparagine          2.8          8           1
 P proline            14.9         42           3
 Q glutamine           6.4         18           2
 R arginine            2.1          6           2
 S serine              8.2         23           2
 T threonine           9.3         26           3
 V valine              8.2         23           2
 W tryptophan          0.7          2           1
 Y tyrosine            3.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium-binding tyrosine phosphorylation-regulated p... 
CABYR                 1.000   calcium-binding tyrosine phosphorylation-regulated p...
CABYR                 1.000   calcium-binding tyrosine phosphorylation-regulated p...
CABYR                 0.258   calcium-binding tyrosine phosphorylation-regulated p...
CABYR                 0.258   calcium-binding tyrosine phosphorylation-regulated p...
CABYR                 0.258   calcium-binding tyrosine phosphorylation-regulated p...
NACA                  0.036   nascent polypeptide-associated complex alpha subuni...
MUC7                  0.034   mucin 7, secreted precursor 
MUC7                  0.034   mucin 7, secreted precursor 
MUC7                  0.034   mucin 7, secreted precursor 
RAPH1                 0.032   Ras association and pleckstrin homology domains 1 is...
BRD4                  0.030   bromodomain-containing protein 4 isoform long 
FLJ22184              0.030   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.030   PREDICTED: hypothetical protein LOC80164 
WASF2                 0.030   WAS protein family, member 2 
FLJ22184              0.030   PREDICTED: hypothetical protein FLJ22184 
WASF1                 0.029   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.029   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.029   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.029   Wiskott-Aldrich syndrome protein family member 1 [Hom...
NHSL1                 0.027   NHS-like 1 
SREBF1                0.027   sterol regulatory element binding transcription fact...
SREBF1                0.027   sterol regulatory element binding transcription fact...
MLL2                  0.027   myeloid/lymphoid or mixed-lineage leukemia 2 
FBXO46                0.027   F-box protein 46 
BRD4                  0.025   bromodomain-containing protein 4 isoform short 
RERE                  0.025   atrophin-1 like protein isoform b 
RERE                  0.025   atrophin-1 like protein isoform a 
RERE                  0.025   atrophin-1 like protein isoform a 
NCKIPSD               0.025   NCK interacting protein with SH3 domain isoform 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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