Guide to the Human Genome
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Name: RFX7 Sequence: fasta or formatted (1460aa) NCBI GI: 148613886
Description:

regulatory factor X domain containing 2

Referenced in:

HLA and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         86           3
 C cysteine            1.3         19           1
 D aspartate           4.1         60           2
 E glutamate           5.1         74           2
 F phenylalanine       2.5         37           1
 G glycine             5.3         77           2
 H histidine           2.5         37           2
 I isoleucine          3.9         57           1
 K lysine              5.3         77           2
 L leucine             7.4        108           2
 M methionine          2.3         34           2
 N asparagine          5.6         82           2
 P proline             8.6        126           3
 Q glutamine           7.7        112           3
 R arginine            2.7         40           2
 S serine             14.2        207           4
 T threonine           7.4        108           2
 V valine              6.2         91           2
 W tryptophan          0.4          6           1
 Y tyrosine            1.5         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   regulatory factor X domain containing 2 
RFX5                  0.070   regulatory factor X, 5 
RFX5                  0.070   regulatory factor X, 5 
MUC17                 0.025   mucin 17 
RFX2                  0.016   regulatory factor X2 isoform b 
RFX2                  0.016   regulatory factor X2 isoform a 
RFX3                  0.016   regulatory factor X3 isoform a 
RFX3                  0.016   regulatory factor X3 isoform b 
RFX1                  0.015   regulatory factor X1 
RFX4                  0.015   regulatory factor X4 isoform b 
RFX4                  0.015   regulatory factor X4 isoform c 
MUC4                  0.014   mucin 4 isoform a 
MUC12                 0.011   PREDICTED: mucin 12 
MUC12                 0.011   PREDICTED: mucin 12 
MUC16                 0.010   mucin 16 
MUC6                  0.010   mucin 6, gastric 
RFX6                  0.010   regulatory factor X, 6 
ARID2                 0.009   AT rich interactive domain 2 (ARID, RFX-like) 
LOC100294420          0.009   PREDICTED: similar to mucin 2 
MUC12                 0.009   PREDICTED: mucin 12, cell surface associated 
MUC2                  0.009   mucin 2 precursor 
NACA                  0.009   nascent polypeptide-associated complex alpha subuni...
LOC100128719          0.009   PREDICTED: hypothetical protein, partial 
LOC100128719          0.009   PREDICTED: hypothetical protein, partial 
NOLC1                 0.009   nucleolar and coiled-body phosphoprotein 1 
TLE2                  0.008   transducin-like enhancer protein 2 isoform 3 
TLE2                  0.008   transducin-like enhancer protein 2 isoform 2 
TLE2                  0.008   transducin-like enhancer protein 2 isoform 1 
MUC21                 0.008   mucin 21 
MUC3A                 0.008   PREDICTED: mucin 3A, intestinal 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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