C11orf30 11676

Name: C11orf30	Sequence: fasta or formatted (1322aa)		NCBI GI: 19923559
Description: EMSY protein		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 90 2 C cysteine 0.5 7 1 D aspartate 2.0 27 2 E glutamate 5.1 67 2 F phenylalanine 0.9 12 1 G glycine 3.9 51 2 H histidine 1.7 23 1 I isoleucine 6.0 79 3 K lysine 6.1 80 2 L leucine 6.2 82 2 M methionine 2.3 30 1 N asparagine 2.3 30 2 P proline 9.0 119 2 Q glutamine 9.8 130 3 R arginine 2.9 38 3 S serine 12.9 171 5 T threonine 11.4 151 3 V valine 8.9 117 3 W tryptophan 0.2 3 1 Y tyrosine 1.1 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 EMSY protein MUC17 0.033 mucin 17 MUC16 0.027 mucin 16 MUC5B 0.026 mucin 5, subtype B, tracheobronchial LOC100294501 0.025 PREDICTED: hypothetical protein LOC100131514 0.023 PREDICTED: similar to hCG1747327, partial MUC2 0.023 mucin 2 precursor LOC100294420 0.022 PREDICTED: similar to mucin 2 MUC5AC 0.022 mucin 5AC MUC3A 0.022 PREDICTED: mucin 3A, intestinal LOC729792 0.022 PREDICTED: hypothetical protein LOC729792 0.022 PREDICTED: hypothetical protein LOC729792 0.022 PREDICTED: hypothetical protein LOC100294238 0.022 PREDICTED: hypothetical protein LOC100294204 0.022 PREDICTED: hypothetical protein LOC100294136 0.022 PREDICTED: hypothetical protein LOC100294091 0.022 PREDICTED: hypothetical protein LOC730401 0.022 PREDICTED: hypothetical protein LOC100294249 0.022 PREDICTED: hypothetical protein XP_002344067 MUC4 0.021 mucin 4 isoform a HCFC1 0.021 host cell factor 1 MUC6 0.021 mucin 6, gastric EP400 0.020 E1A binding protein p400 MUC3B 0.020 PREDICTED: mucin 3B, cell surface associated, parti... MUC3A 0.020 PREDICTED: mucin 3A, cell surface associated, parti... PRG4 0.020 proteoglycan 4 isoform D PRG4 0.020 proteoglycan 4 isoform C MUC12 0.018 PREDICTED: mucin 12 MUC12 0.018 PREDICTED: mucin 12, cell surface associated BPTF 0.018 bromodomain PHD finger transcription factor isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.