Guide to the Human Genome
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Name: CABYR Sequence: fasta or formatted (379aa) NCBI GI: 24797112
Description:

calcium-binding tyrosine phosphorylation-regulated protein isoform c

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [493aa] calcium-binding tyrosine phosphorylation-regulated protein isoform a
alt prot [281aa] calcium-binding tyrosine phosphorylation-regulated protein isoform d
alt prot [475aa] calcium-binding tyrosine phosphorylation-regulated protein isoform b
alt mRNA [379aa] calcium-binding tyrosine phosphorylation-regulated protein isoform c
alt prot [221aa] calcium-binding tyrosine phosphorylation-regulated protein isoform e
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         30           3
 C cysteine            1.1          4           1
 D aspartate           4.0         15           1
 E glutamate           5.3         20           1
 F phenylalanine       3.2         12           1
 G glycine             5.5         21           2
 H histidine           1.6          6           1
 I isoleucine          2.1          8           1
 K lysine              7.9         30           2
 L leucine             5.5         21           2
 M methionine          2.4          9           1
 N asparagine          3.2         12           1
 P proline            12.7         48           3
 Q glutamine           6.3         24           2
 R arginine            2.4          9           2
 S serine              7.9         30           2
 T threonine           9.2         35           3
 V valine              7.9         30           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.2         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium-binding tyrosine phosphorylation-regulated p... 
CABYR                 1.000   calcium-binding tyrosine phosphorylation-regulated p...
CABYR                 0.742   calcium-binding tyrosine phosphorylation-regulated p...
CABYR                 0.449   calcium-binding tyrosine phosphorylation-regulated p...
CABYR                 0.448   calcium-binding tyrosine phosphorylation-regulated p...
CABYR                 0.386   calcium-binding tyrosine phosphorylation-regulated p...
SPA17                 0.028   sperm autoantigenic protein 17 
NACA                  0.027   nascent polypeptide-associated complex alpha subuni...
MUC7                  0.025   mucin 7, secreted precursor 
PRG4                  0.025   proteoglycan 4 isoform D 
PRG4                  0.025   proteoglycan 4 isoform C 
PRG4                  0.025   proteoglycan 4 isoform B 
PRG4                  0.025   proteoglycan 4 isoform A 
MUC7                  0.025   mucin 7, secreted precursor 
MUC7                  0.025   mucin 7, secreted precursor 
MUC17                 0.025   mucin 17 
TNRC6B                0.024   trinucleotide repeat containing 6B isoform 3 
RAPH1                 0.024   Ras association and pleckstrin homology domains 1 is...
ZC3H6                 0.024   zinc finger CCCH-type domain containing 6 
WASF1                 0.024   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.024   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.024   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.024   Wiskott-Aldrich syndrome protein family member 1 [Hom...
BRD4                  0.023   bromodomain-containing protein 4 isoform long 
TNKS1BP1              0.023   tankyrase 1-binding protein 1 
FLJ22184              0.023   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.023   PREDICTED: hypothetical protein LOC80164 
WASF2                 0.023   WAS protein family, member 2 
SREBF1                0.023   sterol regulatory element binding transcription fact...
FLJ22184              0.023   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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