Guide to the Human Genome
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Name: EIF4G3 Sequence: fasta or formatted (1585aa) NCBI GI: 10092601
Description:

eukaryotic translation initiation factor 4 gamma, 3

Referenced in:

Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4        101           3
 C cysteine            1.3         20           1
 D aspartate           5.7         91           3
 E glutamate           9.5        151           3
 F phenylalanine       3.2         50           2
 G glycine             4.6         73           3
 H histidine           1.3         20           1
 I isoleucine          5.3         84           2
 K lysine              7.3        116           2
 L leucine             8.5        135           3
 M methionine          2.1         33           2
 N asparagine          3.2         50           1
 P proline             8.9        141           3
 Q glutamine           5.4         85           3
 R arginine            5.3         84           3
 S serine              8.4        133           2
 T threonine           5.9         94           2
 V valine              5.7         91           2
 W tryptophan          0.8         12           1
 Y tyrosine            1.3         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 4 gamma, 3 ... 
EIF4G1                0.399   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.399   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.394   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.380   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.366   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G2                0.053   eukaryotic translation initiation factor 4 gamma, 2...
EIF4G2                0.053   eukaryotic translation initiation factor 4 gamma, 2 i...
MICALL1               0.015   molecule interacting with Rab13 
PAIP1                 0.014   poly(A) binding protein interacting protein 1 isofor...
PAIP1                 0.014   poly(A) binding protein interacting protein 1 isofor...
PAIP1                 0.014   poly(A) binding protein interacting protein 1 isofor...
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
MUC2                  0.013   mucin 2 precursor 
LOC645139             0.013   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.013   PREDICTED: similar to poly(A) binding protein inter...
LOC100294420          0.013   PREDICTED: similar to mucin 2 
LOC645139             0.013   PREDICTED: similar to poly(A) binding protein intera...
PRG4                  0.012   proteoglycan 4 isoform D 
PRG4                  0.012   proteoglycan 4 isoform C 
PRG4                  0.012   proteoglycan 4 isoform B 
PRG4                  0.012   proteoglycan 4 isoform A 
TTN                   0.012   titin isoform N2-A 
NACA                  0.012   nascent polypeptide-associated complex alpha subuni...
SRCAP                 0.012   Snf2-related CBP activator protein 
MLL2                  0.012   myeloid/lymphoid or mixed-lineage leukemia 2 
GLTSCR1               0.011   glioma tumor suppressor candidate region gene 1 [Ho...
RAPH1                 0.011   Ras association and pleckstrin homology domains 1 is...
MBD6                  0.011   methyl-CpG binding domain protein 6 
ZAN                   0.010   zonadhesin isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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