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Search of human proteins with 239758102
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239758102 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1 [Homo sapiens]
(118 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239758102 PREDICTED: similar to protein-L-isoaspartate (D-asp... 238 8e-64
gi|239752574 PREDICTED: hypothetical protein XP_002348296 [Homo ... 231 7e-62
gi|190360566 protein-L-isoaspartate (D-aspartate) O-methyltransf... 227 2e-60
gi|239757983 PREDICTED: similar to protein-L-isoaspartate (D-asp... 220 2e-58
gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo ... 220 2e-58
gi|239756570 PREDICTED: similar to protein-L-isoaspartate (D-asp... 212 4e-56
gi|239752577 PREDICTED: hypothetical protein XP_002348294 [Homo ... 212 4e-56
gi|239745549 PREDICTED: hypothetical protein XP_002343514 [Homo ... 212 4e-56
gi|157388997 protein-L-isoaspartate (D-aspartate) O-methyltransf... 84 3e-17
gi|157388995 protein-L-isoaspartate (D-aspartate) O-methyltransf... 84 3e-17
gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens] 40 4e-04
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 39 0.001
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 39 0.001
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 37 0.003
gi|118600967 shroom family member 4 [Homo sapiens] 37 0.004
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 37 0.004
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 36 0.006
gi|56676330 HP1-BP74 [Homo sapiens] 36 0.007
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 35 0.013
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 35 0.013
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 35 0.017
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 35 0.017
gi|56118310 nuclear casein kinase and cyclin-dependent kinase su... 34 0.028
gi|5454156 ubiquitin specific protease 16 isoform a [Homo sapiens] 33 0.037
gi|75992941 ubiquitin specific protease 16 isoform a [Homo sapiens] 33 0.037
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 33 0.037
gi|55741677 SET domain containing 1A [Homo sapiens] 33 0.037
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 33 0.037
gi|209862789 microtubule associated monoxygenase, calponin and L... 33 0.037
gi|50312664 ubiquitin specific protease 16 isoform b [Homo sapiens] 33 0.048
>gi|239758102 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 118
Score = 238 bits (607), Expect = 8e-64
Identities = 118/118 (100%), Positives = 118/118 (100%)
Query: 1 MANLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQP 60
MANLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQP
Sbjct: 1 MANLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQP 60
Query: 61 LDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118
LDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK
Sbjct: 61 LDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118
>gi|239752574 PREDICTED: hypothetical protein XP_002348296 [Homo
sapiens]
Length = 164
Score = 231 bits (590), Expect = 7e-62
Identities = 115/116 (99%), Positives = 115/116 (99%)
Query: 3 NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 62
NLQDLARIYIR TLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD
Sbjct: 49 NLQDLARIYIRCTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 108
Query: 63 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118
SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK
Sbjct: 109 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 164
>gi|190360566 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 1 [Homo sapiens]
Length = 357
Score = 227 bits (578), Expect = 2e-60
Identities = 112/116 (96%), Positives = 113/116 (97%)
Query: 3 NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 62
NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRI TYVFVGNQLIPQPLD
Sbjct: 242 NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLD 301
Query: 63 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118
SEEDEKMEEDNKEEEEKDH+EAMKPEEPPQNLL EKIMKL LPESLKAYLTYFRDK
Sbjct: 302 SEEDEKMEEDNKEEEEKDHNEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 357
>gi|239757983 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 132
Score = 220 bits (560), Expect = 2e-58
Identities = 109/116 (93%), Positives = 110/116 (94%)
Query: 3 NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 62
NLQDLA IYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRITTYVFVGNQLIPQPLD
Sbjct: 17 NLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQPLD 76
Query: 63 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118
SEEDE+MEEDNKEEEEKDHSEAMKPEEPPQNLL EKIMKL LPESLKAYLTYFRDK
Sbjct: 77 SEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 132
>gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo
sapiens]
Length = 132
Score = 220 bits (560), Expect = 2e-58
Identities = 109/116 (93%), Positives = 110/116 (94%)
Query: 3 NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 62
NLQDLA IYIRRTLR F NDEMQAKGIPQRAPPKRKRKR KQRITTYVFVGNQLIPQPLD
Sbjct: 17 NLQDLALIYIRRTLRKFTNDEMQAKGIPQRAPPKRKRKRAKQRITTYVFVGNQLIPQPLD 76
Query: 63 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118
SEEDE+MEEDNKEEEEKDHSEAMKPEEPPQNLL EKIMKL LPESLKAYLTYFRDK
Sbjct: 77 SEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 132
>gi|239756570 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 150
Score = 212 bits (540), Expect = 4e-56
Identities = 108/116 (93%), Positives = 109/116 (93%)
Query: 3 NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 62
NLQDLA IYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRIT YV V NQLI QPLD
Sbjct: 35 NLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLILQPLD 94
Query: 63 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118
SEEDE+MEEDNKEEEEKDHSEAMKPEEPPQ LLTEKIMKL LPESLKAYLTYFRDK
Sbjct: 95 SEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRDK 150
>gi|239752577 PREDICTED: hypothetical protein XP_002348294 [Homo
sapiens]
Length = 150
Score = 212 bits (540), Expect = 4e-56
Identities = 108/116 (93%), Positives = 109/116 (93%)
Query: 3 NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 62
NLQDLA IYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRIT YV V NQLI QPLD
Sbjct: 35 NLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLILQPLD 94
Query: 63 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118
SEEDE+MEEDNKEEEEKDHSEAMKPEEPPQ LLTEKIMKL LPESLKAYLTYFRDK
Sbjct: 95 SEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRDK 150
>gi|239745549 PREDICTED: hypothetical protein XP_002343514 [Homo
sapiens]
Length = 150
Score = 212 bits (540), Expect = 4e-56
Identities = 108/116 (93%), Positives = 109/116 (93%)
Query: 3 NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 62
NLQDLA IYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRIT YV V NQLI QPLD
Sbjct: 35 NLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLILQPLD 94
Query: 63 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118
SEEDE+MEEDNKEEEEKDHSEAMKPEEPPQ LLTEKIMKL LPESLKAYLTYFRDK
Sbjct: 95 SEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRDK 150
>gi|157388997 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 2 isoform 2 [Homo
sapiens]
Length = 334
Score = 83.6 bits (205), Expect = 3e-17
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 3 NLQDLARIYIRRTLRNFINDEMQAK-GIPQRAPPKRKRKRVKQR-ITTYVFVGNQL---- 56
+LQDLARI IR T++ I+ E +K G + P+ KR+RV++R + T VF+ ++
Sbjct: 215 SLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFASR 274
Query: 57 IPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFR 116
I P D E +EE+ +EEEEK E KP+ PP N L +K++ L LP+ LK YL Y+R
Sbjct: 275 ISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLPDPLKYYLLYYR 332
Query: 117 DK 118
+K
Sbjct: 333 EK 334
>gi|157388995 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 2 isoform 1 [Homo
sapiens]
Length = 361
Score = 83.6 bits (205), Expect = 3e-17
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 3 NLQDLARIYIRRTLRNFINDEMQAK-GIPQRAPPKRKRKRVKQR-ITTYVFVGNQL---- 56
+LQDLARI IR T++ I+ E +K G + P+ KR+RV++R + T VF+ ++
Sbjct: 242 SLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFASR 301
Query: 57 IPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFR 116
I P D E +EE+ +EEEEK E KP+ PP N L +K++ L LP+ LK YL Y+R
Sbjct: 302 ISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLPDPLKYYLLYYR 359
Query: 117 DK 118
+K
Sbjct: 360 EK 361
>gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]
Length = 224
Score = 40.0 bits (92), Expect = 4e-04
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 60 PLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPE 106
P D EEDE+ EE+ +EEEE++ E + PP +++E+ ++ P+
Sbjct: 41 PDDDEEDEEEEEEEEEEEEEEEEEEEEEAPPPPRVVSEEHLRRYAPD 87
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 38.5 bits (88), Expect = 0.001
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKA----YLTYFRD 117
+ EEDE+ KE+EEK+ EA + E+ + L E ++++ LPES+K L YF D
Sbjct: 1891 EKEEDEEETAQEKEDEEKEEEEAAEGEK--EEGLEEGLLQMKLPESVKLQMCHLLEYFCD 1948
Query: 118 K 118
+
Sbjct: 1949 Q 1949
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 38.5 bits (88), Expect = 0.001
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKA----YLTYFRD 117
+ EEDE+ KE+EEK+ EA + E+ + L E ++++ LPES+K L YF D
Sbjct: 1891 EKEEDEEETAQEKEDEEKEEEEAAEGEK--EEGLEEGLLQMKLPESVKLQMCHLLEYFCD 1948
Query: 118 K 118
+
Sbjct: 1949 Q 1949
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 37.0 bits (84), Expect = 0.003
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESL 108
+ EEDE+ EE+ +EEEE + E + EE + + +LT P+S+
Sbjct: 1073 EEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSV 1119
Score = 32.7 bits (73), Expect = 0.063
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 55 QLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEE 89
QL+ +S E+E+ EED +EEEE++ E + EE
Sbjct: 1060 QLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEE 1094
Score = 28.1 bits (61), Expect = 1.5
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 59 QPLDSEEDEKMEEDNKEEEEKDHSE 83
+P + EE+E+ EE+ +EEEE + E
Sbjct: 1349 KPEEEEEEEEEEEEEEEEEEGEEEE 1373
Score = 27.7 bits (60), Expect = 2.0
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 20 INDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEK 79
I +E++ G + +R+ ++ G + + EE+E+ EE+ +EEEE+
Sbjct: 1307 IEEEVKETGEALLPQEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEE 1366
Query: 80 DHSE 83
+ E
Sbjct: 1367 EEGE 1370
Score = 27.7 bits (60), Expect = 2.0
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 54 NQLIPQPLDSEEDEKMEEDNKEEE----------EKDHSEAMKPEEPPQNLLTEK 98
+ LI + EE+E+ EE+ +EEE EKD A E+ + TEK
Sbjct: 1345 DDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEEPEISTEK 1399
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 36.6 bits (83), Expect = 0.004
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 30 PQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEE 89
P R PP K R+ Q Q EE+E+ EE+ +EEEE++ EA + EE
Sbjct: 1101 PPRPPPPNWEK---YRLFRAAQQQKQQQQQQKQQEEEEEEEEEEEEEEEEEEEEAEEEEE 1157
Query: 90 --PPQNLLTE 97
PPQ +E
Sbjct: 1158 ELPPQYFSSE 1167
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 36.6 bits (83), Expect = 0.004
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 26 AKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSE-----EDEKMEEDNKEEEEKD 80
AK ++ + ++K+VK+ G++L+ +P D E ED++ E++KEEEEK+
Sbjct: 1034 AKEEEKKEEMEEEKKQVKEEAKEQC--GDELVAEPADPEEAKSTEDQEENEEDKEEEEKE 1091
Query: 81 HSEAMKPEEPPQNLLT-EKIMKLTLPESLKA 110
+ ++ +L + E+ L L ES K+
Sbjct: 1092 EDSEEEEDDADSSLESPEENNPLRLSESKKS 1122
Score = 28.1 bits (61), Expect = 1.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 53 GNQLIPQPLDSEEDEKMEEDNKEEEEK 79
G L+P + EE+E+ EE+ EEEE+
Sbjct: 6 GEVLLPALYEEEEEEEEEEEEVEEEEE 32
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 36.2 bits (82), Expect = 0.006
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQ 92
+ EE+E+ EE +EEEE+D EA P PPQ
Sbjct: 316 EEEEEEEEEEAEEEEEEEDSEEAPPPLSPPQ 346
>gi|56676330 HP1-BP74 [Homo sapiens]
Length = 553
Score = 35.8 bits (81), Expect = 0.007
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 43 KQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKL 102
++ ++T N+ P E K E +N+E+EE SE K +E Q+ EK +K
Sbjct: 72 EESVSTVEEQENETPPATSSEAEQPKGEPENEEKEENKSSEETKKDEKDQSKEKEKKVKK 131
Query: 103 TLP 105
T+P
Sbjct: 132 TIP 134
Score = 26.6 bits (57), Expect = 4.5
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 6/40 (15%)
Query: 59 QPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEK 98
+P DS ++++ E+++ EE+ +D E PP+ L +K
Sbjct: 427 EPDDSRDEDEDEDESSEEDSEDE------EPPPKRRLQKK 460
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 35.0 bits (79), Expect = 0.013
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 89
D+EEDE+++ED +EEEE++ E + EE
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEE 245
Score = 30.8 bits (68), Expect = 0.24
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 89
D EEDE++EED +E+EE D + EE
Sbjct: 208 DVEEDEEVEEDAEEDEEVDEDGEEEEEE 235
Score = 30.4 bits (67), Expect = 0.31
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEK 98
D E DE EE+ +EEEE++ E + EE Q+ +K
Sbjct: 222 DEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQK 258
Score = 28.5 bits (62), Expect = 1.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 89
+ EE+E+ EE+ +EEEE + E + EE
Sbjct: 233 EEEEEEEEEEEEEEEEEYEQDERDQKEE 260
Score = 27.7 bits (60), Expect = 2.0
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQN 93
+ EE+E+ EE+ +EEEE+++ + + ++ N
Sbjct: 231 EEEEEEEEEEEEEEEEEEEYEQDERDQKEEGN 262
Score = 25.8 bits (55), Expect = 7.7
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 59 QPLDSEEDEKMEEDNKEEEEKDHSE 83
+ +D + +E+ EE+ +EEEE++ E
Sbjct: 223 EEVDEDGEEEEEEEEEEEEEEEEEE 247
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 35.0 bits (79), Expect = 0.013
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 89
D+EEDE+++ED +EEEE++ E + EE
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEE 245
Score = 30.8 bits (68), Expect = 0.24
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 89
D EEDE++EED +E+EE D + EE
Sbjct: 208 DVEEDEEVEEDAEEDEEVDEDGEEEEEE 235
Score = 30.4 bits (67), Expect = 0.31
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEK 98
D E DE EE+ +EEEE++ E + EE Q+ +K
Sbjct: 222 DEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQK 258
Score = 28.5 bits (62), Expect = 1.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 89
+ EE+E+ EE+ +EEEE + E + EE
Sbjct: 233 EEEEEEEEEEEEEEEEEYEQDERDQKEE 260
Score = 27.7 bits (60), Expect = 2.0
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQN 93
+ EE+E+ EE+ +EEEE+++ + + ++ N
Sbjct: 231 EEEEEEEEEEEEEEEEEEEYEQDERDQKEEGN 262
Score = 25.8 bits (55), Expect = 7.7
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 59 QPLDSEEDEKMEEDNKEEEEKDHSE 83
+ +D + +E+ EE+ +EEEE++ E
Sbjct: 223 EEVDEDGEEEEEEEEEEEEEEEEEE 247
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 61 LDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNL 94
L+ EE +K EE K+EE+K+ SE MK EE P +L
Sbjct: 230 LEDEETKKEEETPKQEEQKE-SEKMKSEEQPMDL 262
Score = 27.3 bits (59), Expect = 2.6
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 20/88 (22%)
Query: 14 RTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDE---KME 70
+ + +++E + PQRA R++KR +R+ N LD EE E K+
Sbjct: 1061 KDISTILDEERKENKRPQRAAAARRKKR--RRLNDLDSDSN------LDEEESEDEFKIS 1112
Query: 71 EDNKEE-----EEKDHSEAMKPEEPPQN 93
+ +++E E D SE E+PP N
Sbjct: 1113 DGSQDEFVVSDENPDESE----EDPPSN 1136
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 34.7 bits (78), Expect = 0.017
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLL-TEKIMKLTLPESLKAYLTY 114
DSEE+E+ EE+ +EEEE++ E + EE + E+ + L PE+ + Y
Sbjct: 858 DSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIY 911
Score = 28.1 bits (61), Expect = 1.5
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLT 113
+ EE+++ EE+ +EEEE+ +E + P+ + I LP +LT
Sbjct: 873 EEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIYLFLLPIVFPLWLT 924
Score = 27.7 bits (60), Expect = 2.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEK 98
D + E+ EE+ +E+EE++ E + EE + EK
Sbjct: 855 DGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEK 891
>gi|56118310 nuclear casein kinase and cyclin-dependent kinase
substrate 1 [Homo sapiens]
Length = 243
Score = 33.9 bits (76), Expect = 0.028
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 21 NDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKD 80
N +M K P+R K + R+K +T G + +P S+ ++ KEE+E
Sbjct: 153 NKKMVKKSKPERKEKKMPKPRLKATVTPSPVKGKGKVGRPTASKASKEKTPSPKEEDE-- 210
Query: 81 HSEAMKPEEPPQ 92
+PE PP+
Sbjct: 211 -----EPESPPE 217
>gi|5454156 ubiquitin specific protease 16 isoform a [Homo sapiens]
Length = 823
Score = 33.5 bits (75), Expect = 0.037
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 6/42 (14%)
Query: 58 PQPLDSE------EDEKMEEDNKEEEEKDHSEAMKPEEPPQN 93
P+P + + E++K+E+++K E+E++ E M E PP N
Sbjct: 147 PKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
>gi|75992941 ubiquitin specific protease 16 isoform a [Homo sapiens]
Length = 823
Score = 33.5 bits (75), Expect = 0.037
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 6/42 (14%)
Query: 58 PQPLDSE------EDEKMEEDNKEEEEKDHSEAMKPEEPPQN 93
P+P + + E++K+E+++K E+E++ E M E PP N
Sbjct: 147 PKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 13/54 (24%)
Query: 36 KRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEE 89
KRKRKR K++ + + EE+E+ EE+ KEEEEK+ K ++
Sbjct: 61 KRKRKRKKKK-------------EEEEREEEEEEEEEEKEEEEKEEGRRRKKKK 101
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 36 KRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKM---------EEDNKEEEEKDHSEAMK 86
KRK KR ++R + + + EE+EK EE+ +EEEE++ E +
Sbjct: 28 KRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKE 87
Query: 87 PEEPPQNLLTEKIMK 101
EE + +K K
Sbjct: 88 EEEKEEGRRRKKKKK 102
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 33.5 bits (75), Expect = 0.037
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 28 GIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKP 87
G P PPKR +R K + G LDSE +E +E + E++E+D E +
Sbjct: 935 GRPGTKPPKRDEERGKTQ-------GKHRKSFALDSEGEEASQESSSEKDEEDDEEDEED 987
Query: 88 EEPPQNLLTEK 98
E+ + + T K
Sbjct: 988 EDREEAVDTTK 998
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 33.5 bits (75), Expect = 0.037
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 54 NQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPES 107
N L P + E +EE KEE E A+ PE NL+ E+I++L PES
Sbjct: 487 NMLEPS-ISLSEPLMLEEPEKEEIETSLPIAITPEPEDSNLVEEEIVELDYPES 539
Score = 26.6 bits (57), Expect = 4.5
Identities = 11/45 (24%), Positives = 27/45 (60%)
Query: 64 EEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESL 108
E E+ ++ ++E + +E++ E PQ++L+E++ + PE +
Sbjct: 3406 EPSEERLRNSPVQDEYEFTESLHNEVVPQDILSEELSSESTPEDV 3450
Score = 26.2 bits (56), Expect = 5.9
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 53 GNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNL 94
G + D E ++E + + E E+D + A EEP L
Sbjct: 10 GESFLGSDGDEEATRELETEEESEGEEDETAAESEEEPDSRL 51
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 33.5 bits (75), Expect = 0.037
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 63 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKA--YLTYFRDK 118
+EE+E+ EE+ +EEEE+D+ E + N +++M P ++A + T+ R++
Sbjct: 991 NEEEEEEEEEYEEEEEEDYDEEEEESSEAGNQRLQQVMHAADPLEIQADVHWTHIRER 1048
Score = 27.3 bits (59), Expect = 2.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 75 EEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESL--KAYLTYFRDK 118
++E+K E PE+P NLL E K P+SL + Y +DK
Sbjct: 1709 KKEKKSKGEGRPPEKPSSNLLEEAAAK---PKSLWKSVFSGYKKDK 1751
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 62 DSEEDEKMEEDNKEEEEKDHSEA 84
+ EE E+ EE++ +EEE++ SEA
Sbjct: 997 EEEEYEEEEEEDYDEEEEESSEA 1019
>gi|50312664 ubiquitin specific protease 16 isoform b [Homo sapiens]
Length = 822
Score = 33.1 bits (74), Expect = 0.048
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 65 EDEKMEEDNKEEEEKDHSEAMKPEEPPQN 93
E++K+E+++K E+E++ E M E PP N
Sbjct: 159 ENKKLEKESKNEQEREKKENMAKENPPMN 187
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,114,175
Number of Sequences: 37866
Number of extensions: 263116
Number of successful extensions: 7084
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 2943
Number of HSP's gapped (non-prelim): 2731
length of query: 118
length of database: 18,247,518
effective HSP length: 88
effective length of query: 30
effective length of database: 14,915,310
effective search space: 447459300
effective search space used: 447459300
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.