HLA-DOB 28834

Name: HLA-DOB	Sequence: fasta or formatted (273aa)		NCBI GI: 4504403
Description: major histocompatibility complex, class II, DO beta precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 13 2 C cysteine 1.8 5 1 D aspartate 4.4 12 1 E glutamate 5.5 15 2 F phenylalanine 4.8 13 1 G glycine 7.7 21 1 H histidine 2.2 6 1 I isoleucine 3.3 9 1 K lysine 2.9 8 1 L leucine 11.0 30 2 M methionine 2.9 8 1 N asparagine 3.3 9 1 P proline 4.4 12 1 Q glutamine 5.5 15 1 R arginine 6.2 17 1 S serine 7.0 19 2 T threonine 5.9 16 1 V valine 11.0 30 2 W tryptophan 2.6 7 1 Y tyrosine 2.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class II, DO beta p... LOC100293977 0.522 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.522 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.520 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.518 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.516 major histocompatibility complex, class II, DQ beta... LOC100294278 0.516 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.516 PREDICTED: similar to major histocompatibility comp... HLA-DRB1 0.510 major histocompatibility complex, class II, DR beta... LOC100294318 0.508 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.508 PREDICTED: similar to major histocompatibility comp... LOC100294189 0.507 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.507 PREDICTED: similar to HLA class II histocompatibili... LOC100294468 0.503 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB4 0.501 major histocompatibility complex, class II, DR beta ... LOC100290966 0.493 PREDICTED: hypothetical protein XP_002346811 LOC100294275 0.492 PREDICTED: similar to major histocompatibility comp... LOC100294189 0.492 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.492 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB5 0.492 major histocompatibility complex, class II, DR beta ... HLA-DRB3 0.488 major histocompatibility complex, class II, DR beta ... LOC100294276 0.484 PREDICTED: similar to major histocompatibility comp... HLA-DRB4 0.482 PREDICTED: major histocompatibility complex, class ... LOC100294275 0.482 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.471 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.465 major histocompatibility complex, class II, DP beta ... LOC100294036 0.415 PREDICTED: similar to HLA class II histocompatibili... LOC100133811 0.403 PREDICTED: similar to HLA class II histocompatibili... LOC651845 0.272 PREDICTED: similar to MHC class II antigen LOC100133661 0.169 PREDICTED: similar to MHC class II antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.