LOC651845 7730

Name: LOC651845	Sequence: fasta or formatted (241aa)		NCBI GI: 169168671
Description: PREDICTED: similar to MHC class II antigen		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 17 2 C cysteine 0.8 2 1 D aspartate 1.2 3 1 E glutamate 6.6 16 2 F phenylalanine 3.7 9 1 G glycine 10.8 26 2 H histidine 3.3 8 2 I isoleucine 2.9 7 1 K lysine 3.7 9 2 L leucine 12.4 30 3 M methionine 1.7 4 1 N asparagine 2.5 6 1 P proline 7.5 18 1 Q glutamine 5.8 14 1 R arginine 6.2 15 1 S serine 7.5 18 1 T threonine 5.4 13 1 V valine 7.1 17 2 W tryptophan 2.1 5 1 Y tyrosine 1.7 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to MHC class II antigen LOC100294275 0.510 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.510 PREDICTED: similar to major histocompatibility comp... HLA-DRB4 0.505 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.505 PREDICTED: major histocompatibility complex, class ... HLA-DRB1 0.505 major histocompatibility complex, class II, DR beta... LOC100294036 0.499 PREDICTED: similar to HLA class II histocompatibili... LOC100294468 0.499 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.499 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.499 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.499 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.499 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB3 0.499 major histocompatibility complex, class II, DR beta ... LOC100290966 0.493 PREDICTED: hypothetical protein XP_002346811 LOC100294276 0.493 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.493 PREDICTED: similar to major histocompatibility comp... HLA-DRB5 0.484 major histocompatibility complex, class II, DR beta ... HLA-DQB1 0.360 major histocompatibility complex, class II, DQ beta... LOC100293977 0.355 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.355 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.351 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.349 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.349 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.349 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.343 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.343 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.325 major histocompatibility complex, class II, DP beta ... HLA-DOB 0.310 major histocompatibility complex, class II, DO beta p... LOC100133811 0.285 PREDICTED: similar to HLA class II histocompatibili... HLA-DMB 0.111 major histocompatibility complex, class II, DM beta p... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.