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Search of human proteins with 239757829
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757829 PREDICTED: hypothetical protein [Homo sapiens]
(202 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757829 PREDICTED: hypothetical protein [Homo sapiens] 428 e-120
gi|239752340 PREDICTED: hypothetical protein XP_002348205 [Homo ... 414 e-116
gi|239746853 PREDICTED: hypothetical protein XP_002343864 [Homo ... 414 e-116
gi|239755402 PREDICTED: hypothetical protein [Homo sapiens] 49 4e-06
gi|239749910 PREDICTED: hypothetical protein XP_002347211 [Homo ... 49 4e-06
gi|239744211 PREDICTED: hypothetical protein XP_002343075 [Homo ... 49 4e-06
gi|239757324 PREDICTED: hypothetical protein XP_002345241 [Homo ... 42 4e-04
gi|239751831 PREDICTED: hypothetical protein XP_002348009 [Homo ... 42 4e-04
gi|239746324 PREDICTED: hypothetical protein XP_002343730 [Homo ... 42 4e-04
gi|239757352 PREDICTED: similar to LMARRLC1A [Homo sapiens] 40 0.001
gi|239751859 PREDICTED: similar to LMARRLC1A [Homo sapiens] 40 0.001
gi|239746350 PREDICTED: hypothetical protein XP_002343735 [Homo ... 40 0.001
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 36 0.019
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 36 0.019
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 36 0.019
gi|5031761 homeobox A1 isoform a [Homo sapiens] 36 0.019
gi|84697022 homeobox A1 isoform b [Homo sapiens] 36 0.019
gi|239758017 PREDICTED: similar to pseudoautosomal GTP-binding p... 35 0.033
gi|32307177 forkhead box G1 [Homo sapiens] 34 0.074
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s... 34 0.097
gi|187828880 calcium channel, alpha 1A subunit isoform 3 [Homo s... 34 0.097
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 34 0.097
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 34 0.097
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 34 0.097
gi|23308699 transcription factor MAFB [Homo sapiens] 33 0.13
gi|18765752 dual-specificity tyrosine-(Y)-phosphorylation regula... 33 0.22
gi|18765758 dual-specificity tyrosine-(Y)-phosphorylation regula... 33 0.22
gi|149408126 nemo like kinase [Homo sapiens] 33 0.22
gi|82659115 distal-less homeobox 6 [Homo sapiens] 32 0.28
gi|18959212 GS homeobox 2 [Homo sapiens] 32 0.28
>gi|239757829 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 428 bits (1100), Expect = e-120
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MAASGALSVAGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQD 60
MAASGALSVAGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQD
Sbjct: 1 MAASGALSVAGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQD 60
Query: 61 VGIAVGHDQQGQQKASHQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAE 120
VGIAVGHDQQGQQKASHQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAE
Sbjct: 61 VGIAVGHDQQGQQKASHQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAE 120
Query: 121 PPDSQAGEGHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKD 180
PPDSQAGEGHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKD
Sbjct: 121 PPDSQAGEGHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKD 180
Query: 181 PLDGSVHCPERQCQHQQRVCYS 202
PLDGSVHCPERQCQHQQRVCYS
Sbjct: 181 PLDGSVHCPERQCQHQQRVCYS 202
>gi|239752340 PREDICTED: hypothetical protein XP_002348205 [Homo
sapiens]
Length = 218
Score = 414 bits (1065), Expect = e-116
Identities = 194/197 (98%), Positives = 195/197 (98%)
Query: 6 ALSVAGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAV 65
A+ AGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAV
Sbjct: 22 AMPFAGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAV 81
Query: 66 GHDQQGQQKASHQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQ 125
GHDQQGQQKASHQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQ
Sbjct: 82 GHDQQGQQKASHQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQ 141
Query: 126 AGEGHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDPLDGS 185
AGEGHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDPLDGS
Sbjct: 142 AGEGHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDPLDGS 201
Query: 186 VHCPERQCQHQQRVCYS 202
VHCPERQCQHQQRVCYS
Sbjct: 202 VHCPERQCQHQQRVCYS 218
>gi|239746853 PREDICTED: hypothetical protein XP_002343864 [Homo
sapiens]
Length = 218
Score = 414 bits (1065), Expect = e-116
Identities = 194/197 (98%), Positives = 195/197 (98%)
Query: 6 ALSVAGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAV 65
A+ AGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAV
Sbjct: 22 AMPFAGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAV 81
Query: 66 GHDQQGQQKASHQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQ 125
GHDQQGQQKASHQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQ
Sbjct: 82 GHDQQGQQKASHQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQ 141
Query: 126 AGEGHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDPLDGS 185
AGEGHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDPLDGS
Sbjct: 142 AGEGHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDPLDGS 201
Query: 186 VHCPERQCQHQQRVCYS 202
VHCPERQCQHQQRVCYS
Sbjct: 202 VHCPERQCQHQQRVCYS 218
>gi|239755402 PREDICTED: hypothetical protein [Homo sapiens]
Length = 321
Score = 48.5 bits (114), Expect = 4e-06
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 24/158 (15%)
Query: 30 PAEGKGHHDHHHQPHGPQAPLA-PGNQQHGQDVGIAVGHDQQ---GQQKASHQLQHPQSR 85
PA+G+ HHDHH Q G AP A P + Q + VG DQQ G + A L P+
Sbjct: 70 PADGEHHHDHHQQAEGAPAPSAVPEDDQQREQVG-----DQQQPPGVELALALLGAPELL 124
Query: 86 A-AHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGEG-HAGRGPPAVELGGM 143
A AH+ + L V GV G Q + + + PD Q G A R P +
Sbjct: 125 AEAHVVRLELHVIGVHG----GGQR------QHRGQRPDGQHSVGAEAQRDAPPQR---V 171
Query: 144 NYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDP 181
+ VAV D G++E ++ D + A+A A+ P
Sbjct: 172 HQHDVAVHCDGGEREHRHIDGDRLQEEDQVAQAAAEHP 209
>gi|239749910 PREDICTED: hypothetical protein XP_002347211 [Homo
sapiens]
Length = 321
Score = 48.5 bits (114), Expect = 4e-06
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 24/158 (15%)
Query: 30 PAEGKGHHDHHHQPHGPQAPLA-PGNQQHGQDVGIAVGHDQQ---GQQKASHQLQHPQSR 85
PA+G+ HHDHH Q G AP A P + Q + VG DQQ G + A L P+
Sbjct: 70 PADGEHHHDHHQQAEGAPAPSAVPEDDQQREQVG-----DQQQPPGVELALALLGAPELL 124
Query: 86 A-AHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGEG-HAGRGPPAVELGGM 143
A AH+ + L V GV G Q + + + PD Q G A R P +
Sbjct: 125 AEAHVVRLELHVIGVHG----GGQR------QHRGQRPDGQHSVGAEAQRDAPPQR---V 171
Query: 144 NYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDP 181
+ VAV D G++E ++ D + A+A A+ P
Sbjct: 172 HQHDVAVHCDGGEREHRHIDGDRLQEEDQVAQAAAEHP 209
>gi|239744211 PREDICTED: hypothetical protein XP_002343075 [Homo
sapiens]
Length = 321
Score = 48.5 bits (114), Expect = 4e-06
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 24/158 (15%)
Query: 30 PAEGKGHHDHHHQPHGPQAPLA-PGNQQHGQDVGIAVGHDQQ---GQQKASHQLQHPQSR 85
PA+G+ HHDHH Q G AP A P + Q + VG DQQ G + A L P+
Sbjct: 70 PADGEHHHDHHQQAEGAPAPSAVPEDDQQREQVG-----DQQQPPGVELALALLGAPELL 124
Query: 86 A-AHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGEG-HAGRGPPAVELGGM 143
A AH+ + L V GV G Q + + + PD Q G A R P +
Sbjct: 125 AEAHVVRLELHVIGVHG----GGQR------QHRGQRPDGQHSVGAEAQRDAPPQR---V 171
Query: 144 NYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDP 181
+ VAV D G++E ++ D + A+A A+ P
Sbjct: 172 HQHDVAVHCDGGEREHRHIDGDRLQEEDQVAQAAAEHP 209
>gi|239757324 PREDICTED: hypothetical protein XP_002345241 [Homo
sapiens]
Length = 582
Score = 42.0 bits (97), Expect = 4e-04
Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 35/195 (17%)
Query: 21 HQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKA----- 75
HQ QV+G PA+ K HH+ Q P A G Q+ +A GH QG Q+A
Sbjct: 54 HQPQQVVGCPADKKPHHN-----GCAQRPAASGCP--AQEGTVAAGHGHQGPQEAKKKPD 106
Query: 76 -SHQLQHPQSRAA--HL----WEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGE 128
SH++ A H WEV+L V D GE+Q + P G
Sbjct: 107 GSHRILGAGGAAVVHHTLQPGWEVLLVQPAV----------DGGGHGEQQGQCPGCPTGH 156
Query: 129 GHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEG----TCHFAEARAKDPLDG 184
H R G + V ++ Q++ + + ++G T H G
Sbjct: 157 LHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVAS--TG 214
Query: 185 SVHCPERQCQHQQRV 199
+ HC + Q Q Q++
Sbjct: 215 NGHCQDGQRQTAQQI 229
Score = 36.6 bits (83), Expect = 0.015
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 98 GVEALVVVGRQEDEVWEGEKQAEPPDSQAGEGHAGRGPPAVELGGMNYVQVAVKADAGQQ 157
GV+A V VG+ + + + +Q E QAG + G + Q AV AD GQ+
Sbjct: 346 GVDAAVDVGKGDTQGVQLIQQQEGDPGQAGPSEV------LAPDGFKHQQKAVGADGGQE 399
Query: 158 EGSCVEVDVEEGTCHFAEARAKDPL 182
+ + V V+ +EG A AK P+
Sbjct: 400 QDAGVHVEQDEGGQDAAGGPAKGPV 424
Score = 27.3 bits (59), Expect = 9.0
Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 18/129 (13%)
Query: 29 GPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQSRAAH 88
GP+E HQ +A A G Q+ QD G+ V D+ GQ A + P
Sbjct: 375 GPSEVLAPDGFKHQQ---KAVGADGGQE--QDAGVHVEQDEGGQDAAGGPAKGP------ 423
Query: 89 LWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGE-GHAGRGPPAVELGGMNYVQ 147
VV+ G E G+++ G +Q E PD G G R P + ++ +
Sbjct: 424 ---VVMLYNGREQ---DGQRQAGEEVGYRQVEEPDGIDGPLGLECRHPDHQGIAQHSHQE 477
Query: 148 VAVKADAGQ 156
K D GQ
Sbjct: 478 DDCKDDQGQ 486
>gi|239751831 PREDICTED: hypothetical protein XP_002348009 [Homo
sapiens]
Length = 589
Score = 42.0 bits (97), Expect = 4e-04
Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 35/195 (17%)
Query: 21 HQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKA----- 75
HQ QV+G PA+ K HH+ Q P A G Q+ +A GH QG Q+A
Sbjct: 61 HQPQQVVGCPADKKPHHN-----GCAQRPAASGCP--AQEGTVAAGHGHQGPQEAKKKPD 113
Query: 76 -SHQLQHPQSRAA--HL----WEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGE 128
SH++ A H WEV+L V D GE+Q + P G
Sbjct: 114 GSHRILGAGGAAVVHHTLQPGWEVLLVQPAV----------DGGGHGEQQGQCPGCPTGH 163
Query: 129 GHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEG----TCHFAEARAKDPLDG 184
H R G + V ++ Q++ + + ++G T H G
Sbjct: 164 LHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVAS--TG 221
Query: 185 SVHCPERQCQHQQRV 199
+ HC + Q Q Q++
Sbjct: 222 NGHCQDGQRQTAQQI 236
Score = 36.6 bits (83), Expect = 0.015
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 98 GVEALVVVGRQEDEVWEGEKQAEPPDSQAGEGHAGRGPPAVELGGMNYVQVAVKADAGQQ 157
GV+A V VG+ + + + +Q E QAG + G + Q AV AD GQ+
Sbjct: 353 GVDAAVDVGKGDTQGVQLIQQQEGDPGQAGPSEV------LAPDGFKHQQKAVGADGGQE 406
Query: 158 EGSCVEVDVEEGTCHFAEARAKDPL 182
+ + V V+ +EG A AK P+
Sbjct: 407 QDAGVHVEQDEGGQDAAGGPAKGPV 431
Score = 27.3 bits (59), Expect = 9.0
Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 18/129 (13%)
Query: 29 GPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQSRAAH 88
GP+E HQ +A A G Q+ QD G+ V D+ GQ A + P
Sbjct: 382 GPSEVLAPDGFKHQQ---KAVGADGGQE--QDAGVHVEQDEGGQDAAGGPAKGP------ 430
Query: 89 LWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGE-GHAGRGPPAVELGGMNYVQ 147
VV+ G E G+++ G +Q E PD G G R P + ++ +
Sbjct: 431 ---VVMLYNGREQ---DGQRQAGEEVGYRQVEEPDGIDGPLGLECRHPDHQGIAQHSHQE 484
Query: 148 VAVKADAGQ 156
K D GQ
Sbjct: 485 DDCKDDQGQ 493
>gi|239746324 PREDICTED: hypothetical protein XP_002343730 [Homo
sapiens]
Length = 329
Score = 42.0 bits (97), Expect = 4e-04
Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 35/195 (17%)
Query: 21 HQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKA----- 75
HQ QV+G PA+ K HH+ Q P A G Q+ +A GH QG Q+A
Sbjct: 61 HQPQQVVGCPADKKPHHN-----GCAQRPAASGCP--AQEGTVAAGHGHQGPQEAKKKPD 113
Query: 76 -SHQLQHPQSRAA--HL----WEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGE 128
SH++ A H WEV+L V D GE+Q + P G
Sbjct: 114 GSHRILGAGGAAVVHHTLQPGWEVLLVQPAV----------DGGGHGEQQGQCPGCPTGH 163
Query: 129 GHAGRGPPAVELGGMNYVQVAVKADAGQQEGSCVEVDVEEG----TCHFAEARAKDPLDG 184
H R G + V ++ Q++ + + ++G T H G
Sbjct: 164 LHPARPLNRRPPGRPESQEAEVGTESCQEQDAGIHGQQDDGGQRPTAHCTIRPVAS--TG 221
Query: 185 SVHCPERQCQHQQRV 199
+ HC + Q Q Q++
Sbjct: 222 NGHCQDGQRQTAQQI 236
>gi|239757352 PREDICTED: similar to LMARRLC1A [Homo sapiens]
Length = 279
Score = 40.0 bits (92), Expect = 0.001
Identities = 45/165 (27%), Positives = 67/165 (40%), Gaps = 31/165 (18%)
Query: 32 EGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQSRAAHLWE 91
+GKG D P P+ N HG A +D+ ASH+ Q HL+
Sbjct: 39 QGKGKDDT--MPSRSSGPITDSNDGHG----CAEANDEPDD--ASHR----QHGNGHLYP 86
Query: 92 VVLAVGGVEALVVVG---------RQEDEVWEGEKQAEPP---DSQAGEGHAGRGPPAVE 139
+ VG + G ++ W+ E+Q+ P D G+ H AV
Sbjct: 87 LFRVVGPGRKVKSAGYCPRFTRYCSHTNDNWQCEEQSHHPGPNDHLLGQAHG-----AVV 141
Query: 140 LGG--MNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDPL 182
LG M AV+++ G QE + +VDV G FA+ A+ P+
Sbjct: 142 LGPDWMQDANTAVQSNEGDQEDTSEQVDVHYGKEEFAQEPAERPM 186
>gi|239751859 PREDICTED: similar to LMARRLC1A [Homo sapiens]
Length = 279
Score = 40.0 bits (92), Expect = 0.001
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 25/162 (15%)
Query: 32 EGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQSRAAHLWE 91
+GKG D P P+ N HG A +D+ ASH+ QH L+
Sbjct: 39 QGKGKDDT--MPSRSSGPITDSNDGHG----CAEANDEPDD--ASHR-QHGNGHIYPLFR 89
Query: 92 VVLAVGGVEALVVVGR------QEDEVWEGEKQAEPP---DSQAGEGHAGRGPPAVELGG 142
VV V++ R ++ W+ E+Q+ P D G+ H AV LG
Sbjct: 90 VVGPGRKVKSAGYCPRFTRYCSHTNDNWQCEEQSHHPGPNDHLLGQAHG-----AVVLGP 144
Query: 143 --MNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDPL 182
M AV+++ G QE + +VDV G FA+ A+ P+
Sbjct: 145 DWMQDANTAVQSNEGDQEDTSEQVDVHYGKDEFAQEPAERPM 186
>gi|239746350 PREDICTED: hypothetical protein XP_002343735 [Homo
sapiens]
Length = 279
Score = 40.0 bits (92), Expect = 0.001
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 25/162 (15%)
Query: 32 EGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQSRAAHLWE 91
+GKG D P P+ N HG A +D+ ASH+ QH L+
Sbjct: 39 QGKGKDDT--MPSRSSGPITDSNDGHG----CAEANDEPDD--ASHR-QHGNGHIYPLFR 89
Query: 92 VVLAVGGVEALVVVGR------QEDEVWEGEKQAEPP---DSQAGEGHAGRGPPAVELGG 142
VV V++ R ++ W+ E+Q+ P D G+ H AV LG
Sbjct: 90 VVGPGRKVKSAGYCPRFTRYCSHTNDNWQCEEQSHHPGPNDHLLGQAHG-----AVVLGP 144
Query: 143 --MNYVQVAVKADAGQQEGSCVEVDVEEGTCHFAEARAKDPL 182
M AV+++ G QE + +VDV G FA+ A+ P+
Sbjct: 145 DWMQDANTAVQSNEGDQEDTSEQVDVHYGKDEFAQEPAERPM 186
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 36.2 bits (82), Expect = 0.019
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 18/61 (29%)
Query: 5 GALSVAGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPL--------APGNQQ 56
GA + A SAQ H H H HH HHH P P +PL PG+++
Sbjct: 641 GASAGAPHSAQTHPHHHHHPH----------HHHHHHHPPQPPSPLLLLPPQPDEPGSER 690
Query: 57 H 57
H
Sbjct: 691 H 691
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 36.2 bits (82), Expect = 0.019
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 18/61 (29%)
Query: 5 GALSVAGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPL--------APGNQQ 56
GA + A SAQ H H H HH HHH P P +PL PG+++
Sbjct: 641 GASAGAPHSAQTHPHHHHHPH----------HHHHHHHPPQPPSPLLLLPPQPDEPGSER 690
Query: 57 H 57
H
Sbjct: 691 H 691
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 36.2 bits (82), Expect = 0.019
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 18/61 (29%)
Query: 5 GALSVAGQSAQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPL--------APGNQQ 56
GA + A SAQ H H H HH HHH P P +PL PG+++
Sbjct: 641 GASAGAPHSAQTHPHHHHHPH----------HHHHHHHPPQPPSPLLLLPPQPDEPGSER 690
Query: 57 H 57
H
Sbjct: 691 H 691
>gi|5031761 homeobox A1 isoform a [Homo sapiens]
Length = 335
Score = 36.2 bits (82), Expect = 0.019
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 33 GKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQS 84
G HH HHH H PQ P Q ++G++ H G S P S
Sbjct: 62 GSPHHHHHHHHHHPQ----PATYQTSGNLGVSYSHSSCGPSYGSQNFSAPYS 109
>gi|84697022 homeobox A1 isoform b [Homo sapiens]
Length = 137
Score = 36.2 bits (82), Expect = 0.019
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 33 GKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQS 84
G HH HHH H PQ P Q ++G++ H G S P S
Sbjct: 62 GSPHHHHHHHHHHPQ----PATYQTSGNLGVSYSHSSCGPSYGSQNFSAPYS 109
>gi|239758017 PREDICTED: similar to pseudoautosomal GTP-binding
protein-like protein [Homo sapiens]
Length = 411
Score = 35.4 bits (80), Expect = 0.033
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 33 GKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQSRAA 87
G GH D H Q GPQ P P Q G +G H + + HP S A
Sbjct: 304 GAGHSDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKAR-GRAFGHPLSPGA 357
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 34.3 bits (77), Expect = 0.074
Identities = 37/137 (27%), Positives = 44/137 (32%), Gaps = 28/137 (20%)
Query: 17 HEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQ----------QHGQDVGIAVG 66
H H HH HH HH P PQ P P Q Q Q G
Sbjct: 44 HPQHHHHHH----------HHHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAA 93
Query: 67 HDQQGQQKASHQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPD-SQ 125
D +G Q+ P AA A+ G +A + G+ E GE PD +
Sbjct: 94 DDDKGPQQLLLPPPPPPPPAA-------ALDGAKADGLGGKGEPGGGPGELAPVGPDEKE 146
Query: 126 AGEGHAGRGPPAVELGG 142
G G G GG
Sbjct: 147 KGAGAGGEEKKGAGEGG 163
>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
sapiens]
Length = 2506
Score = 33.9 bits (76), Expect = 0.097
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 7 LSVAGQSAQVHEDVHQHHQVIGGPAEGKG--HHDHHHQPHGPQAPLAPGNQQHGQDVGIA 64
LS+ QS + + Q G P + K HH HHH H P P Q D G A
Sbjct: 2181 LSMTTQSGDLPSK--ERDQERGRPKDRKHRQHHHHHHHHHHPPPPDKDRYAQERPDHGRA 2238
Query: 65 VGHDQQGQQKASHQLQHPQSR 85
DQ+ + S +H R
Sbjct: 2239 RARDQRWSRSPSEGREHMAHR 2259
>gi|187828880 calcium channel, alpha 1A subunit isoform 3 [Homo
sapiens]
Length = 2261
Score = 33.9 bits (76), Expect = 0.097
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 7 LSVAGQSAQVHEDVHQHHQVIGGPAEGKG--HHDHHHQPHGPQAPLAPGNQQHGQDVGIA 64
LS+ QS + + Q G P + K HH HHH H P P Q D G A
Sbjct: 2182 LSMTTQSGDLPSK--ERDQERGRPKDRKHRQHHHHHHHHHHPPPPDKDRYAQERPDHGRA 2239
Query: 65 VGHDQQGQQKASHQLQHPQSR 85
DQ+ + S +H R
Sbjct: 2240 RARDQRWSRSPSEGREHMAHR 2260
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 33.9 bits (76), Expect = 0.097
Identities = 38/126 (30%), Positives = 41/126 (32%), Gaps = 29/126 (23%)
Query: 17 HEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKAS 76
H H HH HH HHH H Q L QQ Q QQ QQ+
Sbjct: 29 HHHAHHHHH--------HAHHLHHH--HALQQQLNQFQQQQQQ---------QQQQQQQQ 69
Query: 77 HQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGEGHAGRGPP 136
Q QHP S L A GG Q E + DS AG GPP
Sbjct: 70 QQQQHPISNNNSLGG---AGGGAP-------QPGPDMEQPQHGGAKDSAAGGQADPPGPP 119
Query: 137 AVELGG 142
+ G
Sbjct: 120 LLSKPG 125
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 33.9 bits (76), Expect = 0.097
Identities = 38/126 (30%), Positives = 41/126 (32%), Gaps = 29/126 (23%)
Query: 17 HEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKAS 76
H H HH HH HHH H Q L QQ Q QQ QQ+
Sbjct: 29 HHHAHHHHH--------HAHHLHHH--HALQQQLNQFQQQQQQ---------QQQQQQQQ 69
Query: 77 HQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGEGHAGRGPP 136
Q QHP S L A GG Q E + DS AG GPP
Sbjct: 70 QQQQHPISNNNSLGG---AGGGAP-------QPGPDMEQPQHGGAKDSAAGGQADPPGPP 119
Query: 137 AVELGG 142
+ G
Sbjct: 120 LLSKPG 125
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 33.9 bits (76), Expect = 0.097
Identities = 38/126 (30%), Positives = 41/126 (32%), Gaps = 29/126 (23%)
Query: 17 HEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKAS 76
H H HH HH HHH H Q L QQ Q QQ QQ+
Sbjct: 29 HHHAHHHHH--------HAHHLHHH--HALQQQLNQFQQQQQQ---------QQQQQQQQ 69
Query: 77 HQLQHPQSRAAHLWEVVLAVGGVEALVVVGRQEDEVWEGEKQAEPPDSQAGEGHAGRGPP 136
Q QHP S L A GG Q E + DS AG GPP
Sbjct: 70 QQQQHPISNNNSLGG---AGGGAP-------QPGPDMEQPQHGGAKDSAAGGQADPPGPP 119
Query: 137 AVELGG 142
+ G
Sbjct: 120 LLSKPG 125
>gi|23308699 transcription factor MAFB [Homo sapiens]
Length = 323
Score = 33.5 bits (75), Expect = 0.13
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 11/52 (21%)
Query: 33 GKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQS 84
G HH HHH PH H G V HD+ G H H Q+
Sbjct: 129 GAHHHHHHHHPH-----------PHHAYPGAGVAHDELGPHAHPHHHHHHQA 169
Score = 28.5 bits (62), Expect = 4.1
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 9/48 (18%)
Query: 17 HEDVHQHHQVIG--------GPAEGKGHHDHHHQPHGPQAPLAPGNQQ 56
H H HH G GP HH HHHQ P + A QQ
Sbjct: 136 HHHPHPHHAYPGAGVAHDELGP-HAHPHHHHHHQASPPPSSAASPAQQ 182
>gi|18765752 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1A isoform 2 [Homo sapiens]
Length = 754
Score = 32.7 bits (73), Expect = 0.22
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 13/66 (19%)
Query: 20 VHQHHQVIGGPAEGKGHHDHHHQPHG---------PQAPLAPGNQQHGQDVGIAVGHDQQ 70
+H HH G + HH HHH HG P+ +P N QD + VGH
Sbjct: 589 LHHHH---GNSSHHHHHHHHHHHHHGQQALGNRTRPRVYNSPTNSSSTQD-SMEVGHSHH 644
Query: 71 GQQKAS 76
S
Sbjct: 645 SMTSLS 650
>gi|18765758 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1A isoform 1 [Homo sapiens]
Length = 763
Score = 32.7 bits (73), Expect = 0.22
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 13/66 (19%)
Query: 20 VHQHHQVIGGPAEGKGHHDHHHQPHG---------PQAPLAPGNQQHGQDVGIAVGHDQQ 70
+H HH G + HH HHH HG P+ +P N QD + VGH
Sbjct: 598 LHHHH---GNSSHHHHHHHHHHHHHGQQALGNRTRPRVYNSPTNSSSTQD-SMEVGHSHH 653
Query: 71 GQQKAS 76
S
Sbjct: 654 SMTSLS 659
>gi|149408126 nemo like kinase [Homo sapiens]
Length = 527
Score = 32.7 bits (73), Expect = 0.22
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 31 AEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQSRAAHLW 90
A G HH HHH PH P L + H Q H G A H +Q S AA
Sbjct: 24 AAGHHHHHHHHLPHLPPPHL--HHHHHPQH------HLHPGSAAAVHPVQQHTSSAA--- 72
Query: 91 EVVLAVGGVEALVVVGRQE 109
A A++ G+Q+
Sbjct: 73 AAAAAAAAAAAMLNPGQQQ 91
>gi|82659115 distal-less homeobox 6 [Homo sapiens]
Length = 265
Score = 32.3 bits (72), Expect = 0.28
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 14 AQVHEDVHQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPG 53
A H +H H A G HH HHHQ H +P A G
Sbjct: 37 AGAHYPLHCLHSAAAAAAAGSHHH-HHHQHHHHGSPYASG 75
>gi|18959212 GS homeobox 2 [Homo sapiens]
Length = 304
Score = 32.3 bits (72), Expect = 0.28
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 21 HQHHQVIGGPAEGKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQ 69
H HH P + HH HHHQP P + A A+GH Q
Sbjct: 126 HHHHH----PPQ---HHHHHHQPQQPGSAAAAAAAAAAAAAAAALGHPQ 167
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,706,452
Number of Sequences: 37866
Number of extensions: 496330
Number of successful extensions: 2072
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 1674
Number of HSP's gapped (non-prelim): 305
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.