Guide to the Human Genome
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Name: DLX6 Sequence: fasta or formatted (265aa) NCBI GI: 82659115
Description:

distal-less homeobox 6

Referenced in:

Homeobox and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         28           7
 C cysteine            0.4          1           1
 D aspartate           3.0          8           2
 E glutamate           2.6          7           1
 F phenylalanine       2.3          6           1
 G glycine             6.8         18           3
 H histidine           8.3         22           6
 I isoleucine          1.9          5           1
 K lysine              4.9         13           2
 L leucine             6.8         18           2
 M methionine          4.5         12           2
 N asparagine          3.4          9           1
 P proline             6.8         18           2
 Q glutamine           9.8         26           6
 R arginine            3.8         10           1
 S serine             12.1         32           2
 T threonine           4.5         12           2
 V valine              1.9          5           1
 W tryptophan          1.1          3           1
 Y tyrosine            4.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   distal-less homeobox 6 
DLX1                  0.455   distal-less homeobox 1 isoform 1 
DLX4                  0.258   distal-less homeobox 4 isoform a 
DLX5                  0.252   distal-less homeobox 5 
DLX4                  0.242   distal-less homeobox 4 isoform b 
DLX2                  0.222   distal-less homeobox 2 
DLX3                  0.216   distal-less homeobox 3 
HOXA1                 0.104   homeobox A1 isoform a 
MSX1                  0.104   msh homeobox 1 
BARX2                 0.104   BarH-like homeobox 2 
BARX1                 0.102   BarH-like homeobox 1 
MSX2                  0.100   msh homeobox 2 
NKX2-6                0.095   NK2 transcription factor related, locus 6 
BSX                   0.095   brain specific homeobox 
ARX                   0.093   aristaless related homeobox 
HOXD3                 0.091   homeobox D3 
NKX1-1                0.091   PREDICTED: HPX-153 homeobox 
NKX2-3                0.091   NK2 transcription factor related, locus 3 
NKX2-5                0.089   NK2 transcription factor related, locus 5 
NKX1-1                0.089   PREDICTED: NK1 homeobox 1 
NKX1-1                0.089   PREDICTED: NK1 homeobox 1 
MNX1                  0.089   homeo box HB9 
EMX2                  0.089   empty spiracles homeobox 2 
NKX6-1                0.087   NK6 transcription factor related, locus 1 
GSX2                  0.085   GS homeobox 2 
DLX1                  0.085   distal-less homeobox 1 isoform 2 
NKX6-2                0.085   NK6 transcription factor related, locus 2 
NKX2-2                0.083   NK2 transcription factor related, locus 2 
BARHL1                0.083   BarH-like homeobox 1 
NKX1-2                0.083   NK1 homeobox 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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