LOC100290054 20982

Name: LOC100290054	Sequence: fasta or formatted (589aa)		NCBI GI: 239751831
Description: PREDICTED: hypothetical protein XP_002348009		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 50 2 C cysteine 2.0 12 1 D aspartate 5.4 32 2 E glutamate 7.1 42 2 F phenylalanine 1.0 6 1 G glycine 15.4 91 3 H histidine 7.0 41 2 I isoleucine 4.6 27 2 K lysine 2.9 17 3 L leucine 4.2 25 2 M methionine 0.5 3 1 N asparagine 1.0 6 1 P proline 8.0 47 2 Q glutamine 10.4 61 3 R arginine 5.3 31 2 S serine 4.2 25 1 T threonine 2.9 17 2 V valine 7.6 45 2 W tryptophan 1.5 9 1 Y tyrosine 0.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002348009 LOC100291688 0.966 PREDICTED: hypothetical protein XP_002345241 LOC100287338 0.542 PREDICTED: hypothetical protein XP_002343730 LOC100287311 0.349 PREDICTED: hypothetical protein XP_002343729 LOC100292013 0.028 PREDICTED: similar to LMARRLC1A LOC100287831 0.027 PREDICTED: similar to LMARRLC1A LOC100287831 0.027 PREDICTED: hypothetical protein XP_002343735 COL2A1 0.019 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.019 collagen, type II, alpha 1 isoform 2 precursor [Hom... FLG 0.019 filaggrin COL7A1 0.019 alpha 1 type VII collagen precursor COL5A2 0.016 alpha 2 type V collagen preproprotein COL27A1 0.016 collagen, type XXVII, alpha 1 COL1A1 0.015 alpha 1 type I collagen preproprotein FLG2 0.014 filaggrin family member 2 LOC100292187 0.014 PREDICTED: hypothetical protein LOC100289845 0.014 PREDICTED: hypothetical protein XP_002348205 LOC100289046 0.014 PREDICTED: hypothetical protein XP_002343864 HRNR 0.013 hornerin COL3A1 0.013 collagen type III alpha 1 preproprotein LOC100287484 0.012 PREDICTED: hypothetical protein XP_002343105 JUB 0.012 ajuba isoform 1 COL9A2 0.012 alpha 2 type IX collagen COL13A1 0.012 alpha 1 type XIII collagen isoform 19 COL13A1 0.012 alpha 1 type XIII collagen isoform 17 HRG 0.012 histidine-rich glycoprotein precursor LOC100291911 0.011 PREDICTED: similar to Putative uncharacterized prot... LOC100294438 0.011 PREDICTED: hypothetical protein RPGR 0.011 retinitis pigmentosa GTPase regulator isoform C [Hom... COL28A1 0.011 collagen, type XXVIII precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.