| Name: LOC100293194 | Sequence: fasta or formatted (198aa) | NCBI GI: 239757317 | |
|
Description: PREDICTED: hypothetical protein
| Not currently referenced in the text | ||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 14.1 28 4 C cysteine 3.5 7 2 D aspartate 1.0 2 1 E glutamate 3.0 6 1 F phenylalanine 2.0 4 1 G glycine 19.2 38 3 H histidine 0.0 0 0 I isoleucine 0.5 1 1 K lysine 1.5 3 1 L leucine 4.5 9 1 M methionine 3.0 6 1 N asparagine 1.0 2 1 P proline 10.1 20 1 Q glutamine 0.0 0 0 R arginine 8.1 16 2 S serine 5.6 11 2 T threonine 12.1 24 2 V valine 7.6 15 1 W tryptophan 2.5 5 1 Y tyrosine 0.5 1 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein COL1A2 0.041 alpha 2 type I collagen COL2A1 0.038 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.038 collagen, type II, alpha 1 isoform 2 precursor [Hom... PHOX2B 0.038 paired-like homeobox 2b COL9A1 0.036 alpha 1 type IX collagen isoform 1 precursor COL9A1 0.036 alpha 1 type IX collagen isoform 2 precursor COL5A1 0.036 alpha 1 type V collagen preproprotein COL1A1 0.033 alpha 1 type I collagen preproprotein COL4A6 0.033 type IV alpha 6 collagen isoform A precursor COL4A6 0.033 type IV alpha 6 collagen isoform B precursor SCRT1 0.033 scratch LOC100293409 0.031 PREDICTED: similar to Mucin-19 LOC285556 0.031 PREDICTED: hypothetical protein LOC285556 LOC100291118 0.031 PREDICTED: hypothetical protein XP_002347351 LOC285556 0.031 PREDICTED: hypothetical protein LOC285556 LOC100287737 0.031 PREDICTED: hypothetical protein XP_002343203 LOC285556 0.031 PREDICTED: hypothetical protein LOC285556 GSK3A 0.031 glycogen synthase kinase 3 alpha COL4A4 0.031 alpha 4 type IV collagen precursor OSBP 0.031 oxysterol binding protein COL22A1 0.031 collagen, type XXII, alpha 1 AR 0.028 androgen receptor isoform 1 COL3A1 0.028 collagen type III alpha 1 preproprotein LOC100293045 0.028 PREDICTED: hypothetical protein COL4A2 0.028 alpha 2 type IV collagen preproprotein HMX1 0.028 homeo box (H6 family) 1 COL11A1 0.026 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.026 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.026 alpha 1 type XI collagen isoform A preproprotein [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
