Guide to the Human Genome
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Name: GSK3A Sequence: fasta or formatted (483aa) NCBI GI: 49574532
Description:

glycogen synthase kinase 3 alpha

Referenced in:

Glycogen

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         31           1
 C cysteine            1.7          8           1
 D aspartate           3.3         16           1
 E glutamate           4.8         23           1
 F phenylalanine       3.7         18           2
 G glycine            13.7         66          10
 H histidine           1.4          7           1
 I isoleucine          4.3         21           2
 K lysine              4.6         22           2
 L leucine             9.3         45           3
 M methionine          1.0          5           1
 N asparagine          2.7         13           2
 P proline             7.9         38           3
 Q glutamine           3.5         17           1
 R arginine            5.2         25           1
 S serine              9.5         46           3
 T threonine           6.6         32           3
 V valine              6.2         30           2
 W tryptophan          0.6          3           1
 Y tyrosine            3.5         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycogen synthase kinase 3 alpha 
GSK3B                 0.632   glycogen synthase kinase 3 beta isoform 2 
GSK3B                 0.622   glycogen synthase kinase 3 beta isoform 1 
CDK7                  0.158   cyclin-dependent kinase 7 
ICK                   0.156   intestinal cell kinase 
ICK                   0.156   intestinal cell kinase 
MAK                   0.155   male germ cell-associated kinase 
CDK2                  0.155   cyclin-dependent kinase 2 isoform 1 
CDKL2                 0.155   cyclin-dependent kinase-like 2 
CDK3                  0.154   cyclin-dependent kinase 3 
CDKL5                 0.154   cyclin-dependent kinase-like 5 
CDKL5                 0.154   cyclin-dependent kinase-like 5 
CDKL1                 0.146   cyclin-dependent kinase-like 1 
CDK5                  0.145   cyclin-dependent kinase 5 
CDKL4                 0.144   cyclin-dependent kinase-like 4 
MAPK3                 0.143   mitogen-activated protein kinase 3 isoform 2 
MAPK3                 0.143   mitogen-activated protein kinase 3 isoform 1 
CCRK                  0.141   cell cycle related kinase isoform 3 
MAPK7                 0.140   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.140   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.140   mitogen-activated protein kinase 7 isoform 1 
PFTK2                 0.140   PFTAIRE protein kinase 2 
PCTK2                 0.139   PCTAIRE protein kinase 2 
MAPK11                0.138   mitogen-activated protein kinase 11 
MAPK1                 0.137   mitogen-activated protein kinase 1 
MAPK1                 0.137   mitogen-activated protein kinase 1 
CDC2                  0.136   cell division cycle 2 isoform 1 
PCTK3                 0.136   PCTAIRE protein kinase 3 isoform a 
PCTK3                 0.136   PCTAIRE protein kinase 3 isoform b 
PCTK3                 0.136   PCTAIRE protein kinase 3 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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