Guide to the Human Genome
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Name: ERBB2IP Sequence: fasta or formatted (1371aa) NCBI GI: 8923909
Description:

ERBB2 interacting protein isoform 2

Referenced in:

Leucine-rich Repeat Family
PDZ Domain

Other entries for this name:
alt prot [1302aa] ERBB2 interacting protein isoform 7
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         52           2
 C cysteine            0.9         12           1
 D aspartate           5.8         79           3
 E glutamate           8.2        112           3
 F phenylalanine       2.9         40           1
 G glycine             4.4         60           2
 H histidine           2.6         35           2
 I isoleucine          5.5         75           2
 K lysine              6.1         83           2
 L leucine             9.8        135           3
 M methionine          2.2         30           2
 N asparagine          7.0         96           2
 P proline             6.8         93           2
 Q glutamine           5.7         78           2
 R arginine            4.4         61           2
 S serine             10.6        145           5
 T threonine           6.0         82           3
 V valine              5.0         69           2
 W tryptophan          0.5          7           1
 Y tyrosine            2.0         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ERBB2 interacting protein isoform 2 
ERBB2IP               0.880   ERBB2 interacting protein isoform 7 
LRRC7                 0.248   leucine rich repeat containing 7 
SCRIB                 0.134   scribble isoform b 
SCRIB                 0.134   scribble isoform a 
LRRC1                 0.129   leucine rich repeat containing 1 
SHOC2                 0.061   soc-2 suppressor of clear homolog 
LRRIQ4                0.055   leucine-rich repeats and IQ motif containing 4 [Hom...
LOC401387             0.054   leucine-rich repeat and death domain-containing pro...
MFHAS1                0.046   malignant fibrous histiocytoma amplified sequence 1...
LRRC40                0.046   leucine rich repeat containing 40 
FLII                  0.042   flightless I homolog 
PHLPP2                0.037   PH domain and leucine rich repeat protein phosphatas...
LRRC8B                0.036   leucine rich repeat containing 8 family, member B [...
LRRC8B                0.036   leucine rich repeat containing 8 family, member B [H...
LRRC8E                0.035   leucine rich repeat containing 8 family, member E [H...
LRRC8A                0.033   leucine rich repeat containing 8 family, member A [H...
LRRC8A                0.033   leucine rich repeat containing 8 family, member A [...
LRRC8A                0.033   leucine rich repeat containing 8 family, member A [...
LRRC39                0.033   leucine rich repeat containing 39 
LRRC8C                0.032   leucine rich repeat containing 8 family, member C [H...
LRDD                  0.032   leucine rich repeat and death domain containing prot...
LRDD                  0.032   leucine rich repeat and death domain containing prot...
LRRC15                0.032   leucine rich repeat containing 15 isoform a 
LRRC15                0.032   leucine rich repeat containing 15 isoform b 
LRRC8D                0.031   leucine rich repeat containing 8 family, member D [...
LRRC8D                0.031   leucine rich repeat containing 8 family, member D [H...
PHLPP1                0.030   PH domain and leucine rich repeat protein phosphatas...
LGR5                  0.030   leucine-rich repeat-containing G protein-coupled rece...
RSU1                  0.030   ras suppressor protein 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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