Search of human proteins with 239756853

Search of human proteins with 239756853

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756853 PREDICTED: similar to hCG2042405 [Homo sapiens]
         (144 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756853 PREDICTED: similar to hCG2042405 [Homo sapiens]          300   4e-82
gi|239751341 PREDICTED: hypothetical protein XP_002347812 [Homo ...   269   7e-73
gi|239745840 PREDICTED: hypothetical protein XP_002343602 [Homo ...   269   7e-73
gi|17017976 wingless-type MMTV integration site family, member 9...   128   1e-30
gi|15082261 wingless-type MMTV integration site family, member 9...    71   3e-13
gi|17402916 wingless-type MMTV integration site family, member 1...    51   4e-07
gi|17402914 wingless-type MMTV integration site family, member 1...    51   4e-07
gi|16507239 wingless-type MMTV integration site family, member 6...    42   2e-04
gi|16936520 wingless-type MMTV integration site family, member 1...    40   5e-04
gi|16936522 wingless-type MMTV integration site family, member 1...    39   0.002
gi|17505191 wingless-type MMTV integration site family, member 7...    38   0.003
gi|13518017 wingless-type MMTV integration site family, member 2...    38   0.003
gi|13518021 wingless-type MMTV integration site family, member 2...    38   0.003
gi|40806205 wingless-type MMTV integration site family, member 5...    38   0.003
gi|17402922 wingless-type MMTV integration site family, member 4...    37   0.006
gi|239752226 PREDICTED: hypothetical protein XP_002348164 [Homo ...    36   0.010
gi|17505193 wingless-type MMTV integration site family, member 7...    36   0.010
gi|4507927 wingless-type MMTV integration site family member 2 p...    35   0.028
gi|4885655 wingless-type MMTV integration site family, member 1 ...    33   0.083
gi|151301137 AT-hook transcription factor [Homo sapiens]               30   0.54 
gi|14249180 wingless-type MMTV integration site family, member 5...    29   1.2  
gi|17402919 wingless-type MMTV integration site family, member 5...    29   1.2  
gi|17999524 proacrosin binding protein sp32 precursor [Homo sapi...    28   2.0  
gi|13540477 wingless-type MMTV integration site family, member 3...    28   2.0  
gi|14916475 wingless-type MMTV integration site family, member 3...    28   2.7  
gi|227497624 secretory protein LOC348174 [Homo sapiens]                28   2.7  
gi|209977023 secretory protein LOC348174 [Homo sapiens]                28   2.7  
gi|9506663 ring finger protein 186 [Homo sapiens]                      28   2.7  
gi|239754361 PREDICTED: hypothetical protein [Homo sapiens]            27   4.5  
gi|239748908 PREDICTED: hypothetical protein XP_002346853 [Homo ...    27   4.5  

>gi|239756853 PREDICTED: similar to hCG2042405 [Homo sapiens]
          Length = 144

 Score =  300 bits (767), Expect = 4e-82
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MSQNGVTSFGVSPEMILTRWEVLMPFPGLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGR 60
           MSQNGVTSFGVSPEMILTRWEVLMPFPGLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGR
Sbjct: 1   MSQNGVTSFGVSPEMILTRWEVLMPFPGLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGR 60

Query: 61  EPSLAETLWDAMHLGLECQFQFRHERWNYSLEAGLVSLLMQPEGALGEELQVPQPRAASW 120
           EPSLAETLWDAMHLGLECQFQFRHERWNYSLEAGLVSLLMQPEGALGEELQVPQPRAASW
Sbjct: 61  EPSLAETLWDAMHLGLECQFQFRHERWNYSLEAGLVSLLMQPEGALGEELQVPQPRAASW 120

Query: 121 LNLGSIKKYLGKLFNSSSGPWMQP 144
           LNLGSIKKYLGKLFNSSSGPWMQP
Sbjct: 121 LNLGSIKKYLGKLFNSSSGPWMQP 144


>gi|239751341 PREDICTED: hypothetical protein XP_002347812 [Homo
           sapiens]
          Length = 137

 Score =  269 bits (687), Expect = 7e-73
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 17  LTRWEVLMPFPGLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGREPSLAETLWDAMHLGL 76
           LTRWEVLMPFPGLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGREPSLAETLWDAMHLGL
Sbjct: 10  LTRWEVLMPFPGLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGREPSLAETLWDAMHLGL 69

Query: 77  ECQFQFRHERWNYSLEAGLVSLLMQPEGALGEELQVPQPRAASWLNLGSIKKYLGKLFNS 136
           ECQFQFRHERWNYSLEAGLVSLLMQPEGALGEELQVPQPRAASWLNLGSIKKYLGKLFNS
Sbjct: 70  ECQFQFRHERWNYSLEAGLVSLLMQPEGALGEELQVPQPRAASWLNLGSIKKYLGKLFNS 129

Query: 137 SSGPWMQP 144
           SSGPWMQP
Sbjct: 130 SSGPWMQP 137


>gi|239745840 PREDICTED: hypothetical protein XP_002343602 [Homo
           sapiens]
          Length = 137

 Score =  269 bits (687), Expect = 7e-73
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 17  LTRWEVLMPFPGLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGREPSLAETLWDAMHLGL 76
           LTRWEVLMPFPGLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGREPSLAETLWDAMHLGL
Sbjct: 10  LTRWEVLMPFPGLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGREPSLAETLWDAMHLGL 69

Query: 77  ECQFQFRHERWNYSLEAGLVSLLMQPEGALGEELQVPQPRAASWLNLGSIKKYLGKLFNS 136
           ECQFQFRHERWNYSLEAGLVSLLMQPEGALGEELQVPQPRAASWLNLGSIKKYLGKLFNS
Sbjct: 70  ECQFQFRHERWNYSLEAGLVSLLMQPEGALGEELQVPQPRAASWLNLGSIKKYLGKLFNS 129

Query: 137 SSGPWMQP 144
           SSGPWMQP
Sbjct: 130 SSGPWMQP 137


>gi|17017976 wingless-type MMTV integration site family, member 9B
           precursor [Homo sapiens]
          Length = 357

 Score =  128 bits (322), Expect = 1e-30
 Identities = 68/84 (80%), Positives = 70/84 (83%), Gaps = 2/84 (2%)

Query: 17  LTRWEVLMPFPGLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGREPSLAETLWDAMHLG- 75
           LT  EVL PFPGLGTA APAQG AHLKQCDLLKLSR+QKQLC REP LAETL DA HLG 
Sbjct: 27  LTGREVLTPFPGLGTAAAPAQGGAHLKQCDLLKLSRRQKQLCRREPGLAETLRDAAHLGL 86

Query: 76  LECQFQFRHERWNYSLEAGLVSLL 99
           LECQFQFRHERWN SLE G + LL
Sbjct: 87  LECQFQFRHERWNCSLE-GRMGLL 109


>gi|15082261 wingless-type MMTV integration site family, member 9A
           [Homo sapiens]
          Length = 365

 Score = 71.2 bits (173), Expect = 3e-13
 Identities = 33/58 (56%), Positives = 44/58 (75%), Gaps = 1/58 (1%)

Query: 36  AQGRAHLKQCDLLKLSRQQKQLCGREPSLAETLWDAMHL-GLECQFQFRHERWNYSLE 92
           A  +AH K CD LKL R+Q+++C R+P +AETL +A+ +  LECQFQFR ERWN +LE
Sbjct: 50  AAAQAHYKACDRLKLERKQRRMCRRDPGVAETLVEAVSMSALECQFQFRFERWNCTLE 107


>gi|17402916 wingless-type MMTV integration site family, member 16
           isoform 1 precursor [Homo sapiens]
          Length = 365

 Score = 50.8 bits (120), Expect = 4e-07
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 45  CDLLKLSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWNYSLEAGLVSLLMQPE 103
           C  L L+ +QK+LC R+P L  ++ +   LG+ EC  QFRHERWN  + A   +  M   
Sbjct: 47  CANLPLNSRQKELCKRKPYLLPSIREGARLGIQECGSQFRHERWNCMITAAATTAPMGAS 106

Query: 104 GALGEEL 110
              G EL
Sbjct: 107 PLFGYEL 113


>gi|17402914 wingless-type MMTV integration site family, member 16
           isoform 2 [Homo sapiens]
          Length = 355

 Score = 50.8 bits (120), Expect = 4e-07
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 45  CDLLKLSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWNYSLEAGLVSLLMQPE 103
           C  L L+ +QK+LC R+P L  ++ +   LG+ EC  QFRHERWN  + A   +  M   
Sbjct: 37  CANLPLNSRQKELCKRKPYLLPSIREGARLGIQECGSQFRHERWNCMITAAATTAPMGAS 96

Query: 104 GALGEEL 110
              G EL
Sbjct: 97  PLFGYEL 103


>gi|16507239 wingless-type MMTV integration site family, member 6
           precursor [Homo sapiens]
          Length = 365

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 49  KLSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWNYSLEAGLVSLLMQPE 103
           +L+ +Q +LC  EP +   L     LG+ ECQFQFR  RWN S  +     ++Q +
Sbjct: 46  RLAGRQAELCQAEPEVVAELARGARLGVRECQFQFRFRRWNCSSHSKAFGRILQQD 101


>gi|16936520 wingless-type MMTV integration site family, member 10A
           precursor [Homo sapiens]
          Length = 417

 Score = 40.4 bits (93), Expect = 5e-04
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 22/88 (25%)

Query: 4   NGVTSFGVSPEMILTRWEVLMPFPGLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGREPS 63
           N +    + PE +L    V +  PGL                     SR+Q ++C R P 
Sbjct: 42  NDILDLRLPPEPVLNANTVCLTLPGL---------------------SRRQMEVCVRHPD 80

Query: 64  LAETLWDAMHLGL-ECQFQFRHERWNYS 90
           +A +    + + + ECQ QFR +RWN S
Sbjct: 81  VAASAIQGIQIAIHECQHQFRDQRWNCS 108


>gi|16936522 wingless-type MMTV integration site family, member 10B
           precursor [Homo sapiens]
          Length = 389

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 50  LSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWNYS-LEAG 94
           LS++Q  LC R P +  +    +H+ + ECQ Q R +RWN S LE G
Sbjct: 54  LSKRQLGLCLRNPDVTASALQGLHIAVHECQHQLRDQRWNCSALEGG 100


>gi|17505191 wingless-type MMTV integration site family, member 7A
           precursor [Homo sapiens]
          Length = 349

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 50  LSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWNYSLEAGLVSLLMQPEGALGE 108
           L+ +Q+ +C   P     + +   +GL ECQFQFR+ RWN S         +      G+
Sbjct: 44  LAPRQRAICQSRPDAIIVIGEGSQMGLDECQFQFRNGRWNCS--------ALGERTVFGK 95

Query: 109 ELQVPQPRAA 118
           EL+V    AA
Sbjct: 96  ELKVGSREAA 105


>gi|13518017 wingless-type MMTV integration site family, member 2B
          isoform WNT-2B1 [Homo sapiens]
          Length = 372

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 45 CDLLK-LSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWN 88
          CD +  L  +Q+QLC R P +  ++ +     + ECQ QFRH RWN
Sbjct: 53 CDNIPGLVSRQRQLCQRYPDIMRSVGEGAREWIRECQHQFRHHRWN 98


>gi|13518021 wingless-type MMTV integration site family, member 2B
           isoform WNT-2B2 [Homo sapiens]
          Length = 391

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 45  CDLLK-LSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWN 88
           CD +  L  +Q+QLC R P +  ++ +     + ECQ QFRH RWN
Sbjct: 72  CDNIPGLVSRQRQLCQRYPDIMRSVGEGAREWIRECQHQFRHHRWN 117


>gi|40806205 wingless-type MMTV integration site family, member 5A
           precursor [Homo sapiens]
          Length = 380

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 47  LLKLSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWNYS 90
           L  LS+ QK+LC       + + +    G+ ECQ+QFRH RWN S
Sbjct: 72  LAGLSQGQKKLCHLYQDHMQYIGEGAKTGIKECQYQFRHRRWNCS 116


>gi|17402922 wingless-type MMTV integration site family, member 4
          precursor [Homo sapiens]
          Length = 351

 Score = 37.0 bits (84), Expect = 0.006
 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 45 CDLLK-LSRQQKQLCGREPSLAETLWDAMHLGLE-CQFQFRHERWNYS 90
          C+ LK L ++Q Q+C R   + +++     L +E CQ+QFR+ RWN S
Sbjct: 43 CEKLKGLIQRQVQMCKRNLEVMDSVRRGAQLAIEECQYQFRNRRWNCS 90


>gi|239752226 PREDICTED: hypothetical protein XP_002348164 [Homo
           sapiens]
          Length = 661

 Score = 36.2 bits (82), Expect = 0.010
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 50  LSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWNYSLEAGLVSLLMQPEGALGE 108
           L+ +Q+ +C   P     + +   +G+ ECQ+QFR  RWN S         +  +   G+
Sbjct: 43  LAPRQRAICQSRPDAIIVIGEGAQMGINECQYQFRFGRWNCS--------ALGEKTVFGQ 94

Query: 109 ELQVPQPRAA 118
           EL+V    AA
Sbjct: 95  ELRVGSREAA 104


>gi|17505193 wingless-type MMTV integration site family, member 7B
           precursor [Homo sapiens]
          Length = 349

 Score = 36.2 bits (82), Expect = 0.010
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 50  LSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWNYSLEAGLVSLLMQPEGALGE 108
           L+ +Q+ +C   P     + +   +G+ ECQ+QFR  RWN S         +  +   G+
Sbjct: 44  LAPRQRAICQSRPDAIIVIGEGAQMGINECQYQFRFGRWNCS--------ALGEKTVFGQ 95

Query: 109 ELQVPQPRAA 118
           EL+V    AA
Sbjct: 96  ELRVGSREAA 105


>gi|4507927 wingless-type MMTV integration site family member 2
          precursor [Homo sapiens]
          Length = 360

 Score = 34.7 bits (78), Expect = 0.028
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 36 AQGRAHLKQCDLLK-LSRQQKQLCGREPSLAETLWDAM-HLGLECQFQFRHERWN 88
          A G +    CD +  L   Q+QLC R P +   +   +     ECQ QFR  RWN
Sbjct: 32 ATGGSSRVMCDNVPGLVSSQRQLCHRHPDVMRAISQGVAEWTAECQHQFRQHRWN 86


>gi|4885655 wingless-type MMTV integration site family, member 1
           precursor [Homo sapiens]
          Length = 370

 Score = 33.1 bits (74), Expect = 0.083
 Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 50  LSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWN 88
           LSR+Q++L  + P +  ++   +   + EC++QFR+ RWN
Sbjct: 64  LSRKQRRLIRQNPGILHSVSGGLQSAVRECKWQFRNRRWN 103


>gi|151301137 AT-hook transcription factor [Homo sapiens]
          Length = 1439

 Score = 30.4 bits (67), Expect = 0.54
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 65  AETLWDAMHLGLECQFQFRHERWNYSLEAGLVSLLMQPEGALGEELQVPQPRAASW 120
           AE   D + LG +        + N+S+  G+V     P+G       +PQPR+A W
Sbjct: 460 AENTIDQLRLGAKVNLFSDPPQPNHSIHTGMV-----PQGTKVLSFTIPQPRSAEW 510


>gi|14249180 wingless-type MMTV integration site family, member 5B
          precursor [Homo sapiens]
          Length = 359

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 50 LSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWNYS 90
          LS  Q++LC         + +    G+ ECQ QFR  RWN S
Sbjct: 54 LSPGQRKLCQLYQEHMAYIGEGAKTGIKECQHQFRQRRWNCS 95


>gi|17402919 wingless-type MMTV integration site family, member 5B
          precursor [Homo sapiens]
          Length = 359

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 50 LSRQQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWNYS 90
          LS  Q++LC         + +    G+ ECQ QFR  RWN S
Sbjct: 54 LSPGQRKLCQLYQEHMAYIGEGAKTGIKECQHQFRQRRWNCS 95


>gi|17999524 proacrosin binding protein sp32 precursor [Homo
           sapiens]
          Length = 543

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 14/46 (30%), Positives = 19/46 (41%)

Query: 28  GLGTAVAPAQGRAHLKQCDLLKLSRQQKQLCGREPSLAETLWDAMH 73
           G G +V  + GR H+  C L      + + C  E SL     D  H
Sbjct: 355 GFGKSVCDSLGRRHMSTCALCDFCSLKLEQCHSEASLQRQQCDTSH 400


>gi|13540477 wingless-type MMTV integration site family, member 3
          [Homo sapiens]
          Length = 355

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 53 QQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWN 88
          +Q + C     +  ++ + + LG+ ECQ QFR  RWN
Sbjct: 54 KQLRFCRNYIEIMPSVAEGVKLGIQECQHQFRGRRWN 90


>gi|14916475 wingless-type MMTV integration site family, member 3A
          [Homo sapiens]
          Length = 352

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 53 QQKQLCGREPSLAETLWDAMHLGL-ECQFQFRHERWN 88
          +Q + C     +  ++ + + +G+ ECQ QFR  RWN
Sbjct: 51 KQLRFCRNYVEIMPSVAEGIKIGIQECQHQFRGRRWN 87


>gi|227497624 secretory protein LOC348174 [Homo sapiens]
          Length = 446

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 14/68 (20%)

Query: 35  PAQGRAHLKQCD-LLKLSRQQKQLCGRE-PSLAETLWDAMHLGLECQFQFRHERWNYS-L 91
           PA     L   D L +L++ +  LCG   PSLA  LW  + +G           WN   L
Sbjct: 65  PAADMRRLDWSDSLAQLAQARAALCGTPTPSLASGLWRTLQVG-----------WNMQLL 113

Query: 92  EAGLVSLL 99
            AGLVS +
Sbjct: 114 PAGLVSFV 121


>gi|209977023 secretory protein LOC348174 [Homo sapiens]
          Length = 446

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 14/68 (20%)

Query: 35  PAQGRAHLKQCD-LLKLSRQQKQLCGRE-PSLAETLWDAMHLGLECQFQFRHERWNYS-L 91
           PA     L   D L +L++ +  LCG   PSLA  LW  + +G           WN   L
Sbjct: 65  PAADMRRLDWSDSLAQLAQARAALCGTPTPSLASGLWRTLQVG-----------WNMQLL 113

Query: 92  EAGLVSLL 99
            AGLVS +
Sbjct: 114 PAGLVSFV 121


>gi|9506663 ring finger protein 186 [Homo sapiens]
          Length = 227

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 31 TAVAPAQGRAHLKQCDLLKLSRQQKQLCGREPSL 64
          TAVAPA G +   +CDL  L  ++   C R P L
Sbjct: 22 TAVAPAGGHSGSTECDLECLVCREPYSCPRLPKL 55


>gi|239754361 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 18 TRWEVLMPFPGLGTAVAPAQGRA 40
          +RW +  P PG   AVAPA G A
Sbjct: 61 SRWPLPRPVPGSPAAVAPAPGAA 83


>gi|239748908 PREDICTED: hypothetical protein XP_002346853 [Homo
          sapiens]
          Length = 165

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 18 TRWEVLMPFPGLGTAVAPAQGRA 40
          +RW +  P PG   AVAPA G A
Sbjct: 61 SRWPLPRPVPGSPAAVAPAPGAA 83


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,245,231
Number of Sequences: 37866
Number of extensions: 270375
Number of successful extensions: 525
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 491
Number of HSP's gapped (non-prelim): 37
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.