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Search of human proteins with 239754748
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754748 PREDICTED: hypothetical protein [Homo sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754748 PREDICTED: hypothetical protein [Homo sapiens] 488 e-138
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 51 7e-07
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 51 7e-07
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 51 7e-07
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 51 7e-07
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 49 3e-06
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ... 48 8e-06
gi|116284392 mucin 2 precursor [Homo sapiens] 48 8e-06
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 46 3e-05
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 44 9e-05
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 44 9e-05
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 44 1e-04
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 44 1e-04
gi|89886237 cyclin I family, member 2 [Homo sapiens] 44 1e-04
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 44 2e-04
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 43 2e-04
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 43 2e-04
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 43 2e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 43 2e-04
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 43 3e-04
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens] 43 3e-04
gi|50301232 synaptopodin 2-like isoform b [Homo sapiens] 43 3e-04
gi|33286436 gametogenetin [Homo sapiens] 43 3e-04
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 42 3e-04
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 42 3e-04
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 42 3e-04
gi|68563515 keratinocyte proline-rich protein [Homo sapiens] 42 3e-04
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 42 4e-04
>gi|239754748 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 488 bits (1255), Expect = e-138
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MSFWCECVPVSVWCQHLFVDQPVVFPQERGGDLAELTPDTQLLQLRSTLRLRGPRGWKVG 60
MSFWCECVPVSVWCQHLFVDQPVVFPQERGGDLAELTPDTQLLQLRSTLRLRGPRGWKVG
Sbjct: 1 MSFWCECVPVSVWCQHLFVDQPVVFPQERGGDLAELTPDTQLLQLRSTLRLRGPRGWKVG 60
Query: 61 RRPNLTCDREPGARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSR 120
RRPNLTCDREPGARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSR
Sbjct: 61 RRPNLTCDREPGARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSR 120
Query: 121 RLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEH 180
RLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEH
Sbjct: 121 RLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEH 180
Query: 181 QEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTESRVPAPKY 229
QEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTESRVPAPKY
Sbjct: 181 QEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTESRVPAPKY 229
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 51.2 bits (121), Expect = 7e-07
Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 10/137 (7%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
P E PT +P +P+T + P +++ P P PA T P + A P++
Sbjct: 264 PTTTKEPAPTTPKEP-APTTTKEPAPTTTKSAPTT---PKEPAPTTPKKPAPTTPKE--- 316
Query: 151 WPQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPR 210
P T P T PK PAP ++PA T +EP T EP T + P
Sbjct: 317 -PAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPT 375
Query: 211 SPGGPSLPSTESRVPAP 227
+ PS T + PAP
Sbjct: 376 TTKEPS--PTTPKEPAP 390
Score = 48.5 bits (114), Expect = 5e-06
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 18/144 (12%)
Query: 86 TPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRP 145
T P E PT +P +P+T + P + + P + + P PA + P
Sbjct: 290 TTKSAPTTPKEPAPTTPKKP-APTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT---P 345
Query: 146 RKSGRWPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTR 204
++ P TA PA T PK PAP P++PA T +EP T P+ T
Sbjct: 346 KE----PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSP---------TTPKEPAPTT 392
Query: 205 AQSRPRSPGGPSLPSTESRVPAPK 228
+S P + P+ +T+S PK
Sbjct: 393 TKSAPTTTKEPAPTTTKSAPTTPK 416
Score = 47.4 bits (111), Expect = 1e-05
Identities = 50/199 (25%), Positives = 71/199 (35%), Gaps = 18/199 (9%)
Query: 35 ELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRCTPACKPLRL 94
E T L L P+ + P LT +EP T +P
Sbjct: 180 EKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTP------------TTPKEPAST 227
Query: 95 PELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQS 154
PT T +P+T + P +++ P + P PA + P + +
Sbjct: 228 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 287
Query: 155 TARGLPAKTRPKPPAP-APQQPALTEHQEPRAW--PEVLGLLVTAPEPRTKTRAQSRPRS 211
A T PK PAP P++PA T +EP E P P TK A + P+
Sbjct: 288 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE 347
Query: 212 PG--GPSLPS-TESRVPAP 227
P P P+ T + PAP
Sbjct: 348 PAPTAPKKPAPTTPKEPAP 366
Score = 47.4 bits (111), Expect = 1e-05
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 18/136 (13%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
P E PT +P SP+T + P +++ P ++ P P T +SA P++
Sbjct: 366 PTTPKEPAPTTTKEP-SPTTPKEPAPTTTKSAPTTTKEPA-PTTT---KSAPTTPKE--- 417
Query: 151 WPQSTARGLPAKTRPKPPAP-APQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRP 209
P T PA T PK PAP P++PA T +EP T EP T + P
Sbjct: 418 -PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP--------TTPKEPAPTTTKKPAP 468
Query: 210 RSPGGPSLPSTESRVP 225
+P P+ + + P
Sbjct: 469 TTPKEPAPTTPKETAP 484
Score = 42.4 bits (98), Expect = 3e-04
Identities = 46/155 (29%), Positives = 62/155 (40%), Gaps = 20/155 (12%)
Query: 88 ACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRK 147
A P E PT +P +P+T + P + + P + P G A T A P+K
Sbjct: 537 AAAPNTPKEPAPTTPKEP-APTTPKEPAPTTPKETAPTT--PKGTAPTTLKEPAPTTPKK 593
Query: 148 SG---------RWPQSTARGLPAKTRPKPPAP-APQQPALTEHQEPRAWPEVLGLLVTAP 197
+ P ST PA T PK AP P++PA T +EP T
Sbjct: 594 PAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLK 653
Query: 198 EPRTKTRAQSRPR-----SPGGPSLPSTESRVPAP 227
EP T + P+ + GP+ ST S PAP
Sbjct: 654 EPAPTTPKKPAPKELAPTTTKGPT--STTSDKPAP 686
Score = 41.6 bits (96), Expect = 6e-04
Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 15/126 (11%)
Query: 103 TQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAK 162
T P+ P+ + P + P P PA T P +A P+K T A
Sbjct: 445 TTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKL----TPTTPEKLAP 500
Query: 163 TRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTE 221
T P+ PAP P++ A T +EP T EP T + P +P P+ T
Sbjct: 501 TTPEKPAPTTPEELAPTTPEEPTP--------TTPEEPAPTTPKAAAPNTPKEPA--PTT 550
Query: 222 SRVPAP 227
+ PAP
Sbjct: 551 PKEPAP 556
Score = 39.3 bits (90), Expect = 0.003
Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 15/141 (10%)
Query: 99 PTLGTQPRSPSTGPDRVPRSSRRLPPESRR------PGGPAKTHPARSACCRPRK----S 148
PT +P +P+T + P + ++L P + P PA T P A P + +
Sbjct: 468 PTTPKEP-APTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTT 526
Query: 149 GRWPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAW--PEVLGLLVTAPEPRT-KTR 204
P T A PK PAP P++PA T +EP E P T K
Sbjct: 527 PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 586
Query: 205 AQSRPRSPGGPSLPSTESRVP 225
A + P+ P L T ++ P
Sbjct: 587 APTTPKKPAPKELAPTTTKEP 607
Score = 39.3 bits (90), Expect = 0.003
Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 33/151 (21%)
Query: 102 GTQPRSPSTGPDRVPRSSRRLPPESRRPGG---PAKTHPARSACCRPRK----SGRWPQS 154
GT P +P P+ P+ P PA T P + A P++ + + P S
Sbjct: 622 GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPA---PKELAPTTTKGPTS 678
Query: 155 TARGLPAKTRPKPPAPA---------PQQPALTEHQEPRAWPEVLGLLVTAPEPRT--KT 203
T PA T PK AP P++PA T + P + T EP T K+
Sbjct: 679 TTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKS 738
Query: 204 RAQSRP------------RSPGGPSLPSTES 222
+S P SP P +P+T++
Sbjct: 739 PDESTPELSAEPTPKALENSPKEPGVPTTKT 769
Score = 38.5 bits (88), Expect = 0.005
Identities = 46/199 (23%), Positives = 68/199 (34%), Gaps = 34/199 (17%)
Query: 31 GDLAELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRCTPACK 90
GD TPDT Q KV P +T + RP L +
Sbjct: 95 GDFKVTTPDTSTTQHN-----------KVSTSPKITTAKPINPRPS-LPPNSDTSKETSL 142
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
+ + T T + T D +++ +S P +P
Sbjct: 143 TVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKA- 201
Query: 151 WPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRP 209
++T +G PA T PK P P P++PA T +EP T T +S P
Sbjct: 202 --ETTTKG-PALTTPKEPTPTTPKEPASTTPKEP-----------------TPTTIKSAP 241
Query: 210 RSPGGPSLPSTESRVPAPK 228
+P P+ +T+S PK
Sbjct: 242 TTPKEPAPTTTKSAPTTPK 260
Score = 37.0 bits (84), Expect = 0.014
Identities = 42/165 (25%), Positives = 60/165 (36%), Gaps = 35/165 (21%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLP-----PESRRPGGPAKTHPARSACCRP 145
P E PT +P +P+T + P + P P P PA T P A P
Sbjct: 311 PTTPKEPAPTTPKEP-TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 369
Query: 146 RKSGRWPQSTARGLPAKTRPKPPAP--------------------A---PQQPALTEHQE 182
++ P T P+ T PK PAP A P++P+ T +E
Sbjct: 370 KE----PAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKE 425
Query: 183 PRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTESRVPAP 227
P T +P T + P +P P+ T ++ PAP
Sbjct: 426 PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPA--PTTTKKPAP 468
Score = 28.5 bits (62), Expect = 5.0
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 152 PQSTARGLPAKTRPKPPAPAPQQPAL-----TEHQEPRAWPEVLGLLVT-APEPRTKTRA 205
P+ TA+ T K P PQ+P T ++P+ P V T P T T
Sbjct: 867 PEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPKTTPTPRKMTSTMP 926
Query: 206 QSRPRSPGGPSLPSTESR 223
+ P S ++ T +R
Sbjct: 927 ELNPTSRIAEAMLQTTTR 944
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 51.2 bits (121), Expect = 7e-07
Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 10/137 (7%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
P E PT +P +P+T + P +++ P P PA T P + A P++
Sbjct: 305 PTTTKEPAPTTPKEP-APTTTKEPAPTTTKSAPTT---PKEPAPTTPKKPAPTTPKE--- 357
Query: 151 WPQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPR 210
P T P T PK PAP ++PA T +EP T EP T + P
Sbjct: 358 -PAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPT 416
Query: 211 SPGGPSLPSTESRVPAP 227
+ PS T + PAP
Sbjct: 417 TTKEPS--PTTPKEPAP 431
Score = 48.5 bits (114), Expect = 5e-06
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 18/144 (12%)
Query: 86 TPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRP 145
T P E PT +P +P+T + P + + P + + P PA + P
Sbjct: 331 TTKSAPTTPKEPAPTTPKKP-APTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT---P 386
Query: 146 RKSGRWPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTR 204
++ P TA PA T PK PAP P++PA T +EP T P+ T
Sbjct: 387 KE----PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSP---------TTPKEPAPTT 433
Query: 205 AQSRPRSPGGPSLPSTESRVPAPK 228
+S P + P+ +T+S PK
Sbjct: 434 TKSAPTTTKEPAPTTTKSAPTTPK 457
Score = 47.4 bits (111), Expect = 1e-05
Identities = 50/199 (25%), Positives = 71/199 (35%), Gaps = 18/199 (9%)
Query: 35 ELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRCTPACKPLRL 94
E T L L P+ + P LT +EP T +P
Sbjct: 221 EKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTP------------TTPKEPAST 268
Query: 95 PELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQS 154
PT T +P+T + P +++ P + P PA + P + +
Sbjct: 269 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 328
Query: 155 TARGLPAKTRPKPPAP-APQQPALTEHQEPRAW--PEVLGLLVTAPEPRTKTRAQSRPRS 211
A T PK PAP P++PA T +EP E P P TK A + P+
Sbjct: 329 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE 388
Query: 212 PG--GPSLPS-TESRVPAP 227
P P P+ T + PAP
Sbjct: 389 PAPTAPKKPAPTTPKEPAP 407
Score = 47.4 bits (111), Expect = 1e-05
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 18/136 (13%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
P E PT +P SP+T + P +++ P ++ P P T +SA P++
Sbjct: 407 PTTPKEPAPTTTKEP-SPTTPKEPAPTTTKSAPTTTKEPA-PTTT---KSAPTTPKE--- 458
Query: 151 WPQSTARGLPAKTRPKPPAP-APQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRP 209
P T PA T PK PAP P++PA T +EP T EP T + P
Sbjct: 459 -PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP--------TTPKEPAPTTTKKPAP 509
Query: 210 RSPGGPSLPSTESRVP 225
+P P+ + + P
Sbjct: 510 TTPKEPAPTTPKETAP 525
Score = 42.4 bits (98), Expect = 3e-04
Identities = 46/155 (29%), Positives = 62/155 (40%), Gaps = 20/155 (12%)
Query: 88 ACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRK 147
A P E PT +P +P+T + P + + P + P G A T A P+K
Sbjct: 578 AAAPNTPKEPAPTTPKEP-APTTPKEPAPTTPKETAPTT--PKGTAPTTLKEPAPTTPKK 634
Query: 148 SG---------RWPQSTARGLPAKTRPKPPAP-APQQPALTEHQEPRAWPEVLGLLVTAP 197
+ P ST PA T PK AP P++PA T +EP T
Sbjct: 635 PAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLK 694
Query: 198 EPRTKTRAQSRPR-----SPGGPSLPSTESRVPAP 227
EP T + P+ + GP+ ST S PAP
Sbjct: 695 EPAPTTPKKPAPKELAPTTTKGPT--STTSDKPAP 727
Score = 41.6 bits (96), Expect = 6e-04
Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 15/126 (11%)
Query: 103 TQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAK 162
T P+ P+ + P + P P PA T P +A P+K T A
Sbjct: 486 TTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKL----TPTTPEKLAP 541
Query: 163 TRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTE 221
T P+ PAP P++ A T +EP T EP T + P +P P+ T
Sbjct: 542 TTPEKPAPTTPEELAPTTPEEPTP--------TTPEEPAPTTPKAAAPNTPKEPA--PTT 591
Query: 222 SRVPAP 227
+ PAP
Sbjct: 592 PKEPAP 597
Score = 39.3 bits (90), Expect = 0.003
Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 15/141 (10%)
Query: 99 PTLGTQPRSPSTGPDRVPRSSRRLPPESRR------PGGPAKTHPARSACCRPRK----S 148
PT +P +P+T + P + ++L P + P PA T P A P + +
Sbjct: 509 PTTPKEP-APTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTT 567
Query: 149 GRWPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAW--PEVLGLLVTAPEPRT-KTR 204
P T A PK PAP P++PA T +EP E P T K
Sbjct: 568 PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 627
Query: 205 AQSRPRSPGGPSLPSTESRVP 225
A + P+ P L T ++ P
Sbjct: 628 APTTPKKPAPKELAPTTTKEP 648
Score = 39.3 bits (90), Expect = 0.003
Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 33/151 (21%)
Query: 102 GTQPRSPSTGPDRVPRSSRRLPPESRRPGG---PAKTHPARSACCRPRK----SGRWPQS 154
GT P +P P+ P+ P PA T P + A P++ + + P S
Sbjct: 663 GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPA---PKELAPTTTKGPTS 719
Query: 155 TARGLPAKTRPKPPAPA---------PQQPALTEHQEPRAWPEVLGLLVTAPEPRT--KT 203
T PA T PK AP P++PA T + P + T EP T K+
Sbjct: 720 TTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKS 779
Query: 204 RAQSRP------------RSPGGPSLPSTES 222
+S P SP P +P+T++
Sbjct: 780 PDESTPELSAEPTPKALENSPKEPGVPTTKT 810
Score = 38.5 bits (88), Expect = 0.005
Identities = 46/199 (23%), Positives = 68/199 (34%), Gaps = 34/199 (17%)
Query: 31 GDLAELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRCTPACK 90
GD TPDT Q KV P +T + RP L +
Sbjct: 136 GDFKVTTPDTSTTQHN-----------KVSTSPKITTAKPINPRPS-LPPNSDTSKETSL 183
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
+ + T T + T D +++ +S P +P
Sbjct: 184 TVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKA- 242
Query: 151 WPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRP 209
++T +G PA T PK P P P++PA T +EP T T +S P
Sbjct: 243 --ETTTKG-PALTTPKEPTPTTPKEPASTTPKEP-----------------TPTTIKSAP 282
Query: 210 RSPGGPSLPSTESRVPAPK 228
+P P+ +T+S PK
Sbjct: 283 TTPKEPAPTTTKSAPTTPK 301
Score = 37.0 bits (84), Expect = 0.014
Identities = 42/165 (25%), Positives = 60/165 (36%), Gaps = 35/165 (21%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLP-----PESRRPGGPAKTHPARSACCRP 145
P E PT +P +P+T + P + P P P PA T P A P
Sbjct: 352 PTTPKEPAPTTPKEP-TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 410
Query: 146 RKSGRWPQSTARGLPAKTRPKPPAP--------------------A---PQQPALTEHQE 182
++ P T P+ T PK PAP A P++P+ T +E
Sbjct: 411 KE----PAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKE 466
Query: 183 PRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTESRVPAP 227
P T +P T + P +P P+ T ++ PAP
Sbjct: 467 PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPA--PTTTKKPAP 509
Score = 28.5 bits (62), Expect = 5.0
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 152 PQSTARGLPAKTRPKPPAPAPQQPAL-----TEHQEPRAWPEVLGLLVT-APEPRTKTRA 205
P+ TA+ T K P PQ+P T ++P+ P V T P T T
Sbjct: 908 PEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPKTTPTPRKMTSTMP 967
Query: 206 QSRPRSPGGPSLPSTESR 223
+ P S ++ T +R
Sbjct: 968 ELNPTSRIAEAMLQTTTR 985
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 51.2 bits (121), Expect = 7e-07
Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 10/137 (7%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
P E PT +P +P+T + P +++ P P PA T P + A P++
Sbjct: 357 PTTTKEPAPTTPKEP-APTTTKEPAPTTTKSAPTT---PKEPAPTTPKKPAPTTPKE--- 409
Query: 151 WPQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPR 210
P T P T PK PAP ++PA T +EP T EP T + P
Sbjct: 410 -PAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPT 468
Query: 211 SPGGPSLPSTESRVPAP 227
+ PS T + PAP
Sbjct: 469 TTKEPS--PTTPKEPAP 483
Score = 48.5 bits (114), Expect = 5e-06
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 18/144 (12%)
Query: 86 TPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRP 145
T P E PT +P +P+T + P + + P + + P PA + P
Sbjct: 383 TTKSAPTTPKEPAPTTPKKP-APTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT---P 438
Query: 146 RKSGRWPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTR 204
++ P TA PA T PK PAP P++PA T +EP T P+ T
Sbjct: 439 KE----PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSP---------TTPKEPAPTT 485
Query: 205 AQSRPRSPGGPSLPSTESRVPAPK 228
+S P + P+ +T+S PK
Sbjct: 486 TKSAPTTTKEPAPTTTKSAPTTPK 509
Score = 47.4 bits (111), Expect = 1e-05
Identities = 50/199 (25%), Positives = 71/199 (35%), Gaps = 18/199 (9%)
Query: 35 ELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRCTPACKPLRL 94
E T L L P+ + P LT +EP T +P
Sbjct: 273 EKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTP------------TTPKEPAST 320
Query: 95 PELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQS 154
PT T +P+T + P +++ P + P PA + P + +
Sbjct: 321 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 380
Query: 155 TARGLPAKTRPKPPAP-APQQPALTEHQEPRAW--PEVLGLLVTAPEPRTKTRAQSRPRS 211
A T PK PAP P++PA T +EP E P P TK A + P+
Sbjct: 381 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE 440
Query: 212 PG--GPSLPS-TESRVPAP 227
P P P+ T + PAP
Sbjct: 441 PAPTAPKKPAPTTPKEPAP 459
Score = 47.4 bits (111), Expect = 1e-05
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 18/136 (13%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
P E PT +P SP+T + P +++ P ++ P P T +SA P++
Sbjct: 459 PTTPKEPAPTTTKEP-SPTTPKEPAPTTTKSAPTTTKEPA-PTTT---KSAPTTPKE--- 510
Query: 151 WPQSTARGLPAKTRPKPPAP-APQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRP 209
P T PA T PK PAP P++PA T +EP T EP T + P
Sbjct: 511 -PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP--------TTPKEPAPTTTKKPAP 561
Query: 210 RSPGGPSLPSTESRVP 225
+P P+ + + P
Sbjct: 562 TTPKEPAPTTPKETAP 577
Score = 42.4 bits (98), Expect = 3e-04
Identities = 46/155 (29%), Positives = 62/155 (40%), Gaps = 20/155 (12%)
Query: 88 ACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRK 147
A P E PT +P +P+T + P + + P + P G A T A P+K
Sbjct: 630 AAAPNTPKEPAPTTPKEP-APTTPKEPAPTTPKETAPTT--PKGTAPTTLKEPAPTTPKK 686
Query: 148 SG---------RWPQSTARGLPAKTRPKPPAP-APQQPALTEHQEPRAWPEVLGLLVTAP 197
+ P ST PA T PK AP P++PA T +EP T
Sbjct: 687 PAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLK 746
Query: 198 EPRTKTRAQSRPR-----SPGGPSLPSTESRVPAP 227
EP T + P+ + GP+ ST S PAP
Sbjct: 747 EPAPTTPKKPAPKELAPTTTKGPT--STTSDKPAP 779
Score = 41.6 bits (96), Expect = 6e-04
Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 15/126 (11%)
Query: 103 TQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAK 162
T P+ P+ + P + P P PA T P +A P+K T A
Sbjct: 538 TTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKL----TPTTPEKLAP 593
Query: 163 TRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTE 221
T P+ PAP P++ A T +EP T EP T + P +P P+ T
Sbjct: 594 TTPEKPAPTTPEELAPTTPEEPTP--------TTPEEPAPTTPKAAAPNTPKEPA--PTT 643
Query: 222 SRVPAP 227
+ PAP
Sbjct: 644 PKEPAP 649
Score = 39.3 bits (90), Expect = 0.003
Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 15/141 (10%)
Query: 99 PTLGTQPRSPSTGPDRVPRSSRRLPPESRR------PGGPAKTHPARSACCRPRK----S 148
PT +P +P+T + P + ++L P + P PA T P A P + +
Sbjct: 561 PTTPKEP-APTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTT 619
Query: 149 GRWPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAW--PEVLGLLVTAPEPRT-KTR 204
P T A PK PAP P++PA T +EP E P T K
Sbjct: 620 PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 679
Query: 205 AQSRPRSPGGPSLPSTESRVP 225
A + P+ P L T ++ P
Sbjct: 680 APTTPKKPAPKELAPTTTKEP 700
Score = 39.3 bits (90), Expect = 0.003
Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 33/151 (21%)
Query: 102 GTQPRSPSTGPDRVPRSSRRLPPESRRPGG---PAKTHPARSACCRPRK----SGRWPQS 154
GT P +P P+ P+ P PA T P + A P++ + + P S
Sbjct: 715 GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPA---PKELAPTTTKGPTS 771
Query: 155 TARGLPAKTRPKPPAPA---------PQQPALTEHQEPRAWPEVLGLLVTAPEPRT--KT 203
T PA T PK AP P++PA T + P + T EP T K+
Sbjct: 772 TTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKS 831
Query: 204 RAQSRP------------RSPGGPSLPSTES 222
+S P SP P +P+T++
Sbjct: 832 PDESTPELSAEPTPKALENSPKEPGVPTTKT 862
Score = 38.5 bits (88), Expect = 0.005
Identities = 46/199 (23%), Positives = 68/199 (34%), Gaps = 34/199 (17%)
Query: 31 GDLAELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRCTPACK 90
GD TPDT Q KV P +T + RP L +
Sbjct: 188 GDFKVTTPDTSTTQHN-----------KVSTSPKITTAKPINPRPS-LPPNSDTSKETSL 235
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
+ + T T + T D +++ +S P +P
Sbjct: 236 TVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKA- 294
Query: 151 WPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRP 209
++T +G PA T PK P P P++PA T +EP T T +S P
Sbjct: 295 --ETTTKG-PALTTPKEPTPTTPKEPASTTPKEP-----------------TPTTIKSAP 334
Query: 210 RSPGGPSLPSTESRVPAPK 228
+P P+ +T+S PK
Sbjct: 335 TTPKEPAPTTTKSAPTTPK 353
Score = 37.0 bits (84), Expect = 0.014
Identities = 42/165 (25%), Positives = 60/165 (36%), Gaps = 35/165 (21%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLP-----PESRRPGGPAKTHPARSACCRP 145
P E PT +P +P+T + P + P P P PA T P A P
Sbjct: 404 PTTPKEPAPTTPKEP-TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 462
Query: 146 RKSGRWPQSTARGLPAKTRPKPPAP--------------------A---PQQPALTEHQE 182
++ P T P+ T PK PAP A P++P+ T +E
Sbjct: 463 KE----PAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKE 518
Query: 183 PRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTESRVPAP 227
P T +P T + P +P P+ T ++ PAP
Sbjct: 519 PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPA--PTTTKKPAP 561
Score = 28.5 bits (62), Expect = 5.0
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 152 PQSTARGLPAKTRPKPPAPAPQQPAL-----TEHQEPRAWPEVLGLLVT-APEPRTKTRA 205
P+ TA+ T K P PQ+P T ++P+ P V T P T T
Sbjct: 960 PEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPKTTPTPRKMTSTMP 1019
Query: 206 QSRPRSPGGPSLPSTESR 223
+ P S ++ T +R
Sbjct: 1020 ELNPTSRIAEAMLQTTTR 1037
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 51.2 bits (121), Expect = 7e-07
Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 10/137 (7%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
P E PT +P +P+T + P +++ P P PA T P + A P++
Sbjct: 398 PTTTKEPAPTTPKEP-APTTTKEPAPTTTKSAPTT---PKEPAPTTPKKPAPTTPKE--- 450
Query: 151 WPQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPR 210
P T P T PK PAP ++PA T +EP T EP T + P
Sbjct: 451 -PAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPT 509
Query: 211 SPGGPSLPSTESRVPAP 227
+ PS T + PAP
Sbjct: 510 TTKEPS--PTTPKEPAP 524
Score = 48.5 bits (114), Expect = 5e-06
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 18/144 (12%)
Query: 86 TPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRP 145
T P E PT +P +P+T + P + + P + + P PA + P
Sbjct: 424 TTKSAPTTPKEPAPTTPKKP-APTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT---P 479
Query: 146 RKSGRWPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTR 204
++ P TA PA T PK PAP P++PA T +EP T P+ T
Sbjct: 480 KE----PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSP---------TTPKEPAPTT 526
Query: 205 AQSRPRSPGGPSLPSTESRVPAPK 228
+S P + P+ +T+S PK
Sbjct: 527 TKSAPTTTKEPAPTTTKSAPTTPK 550
Score = 47.4 bits (111), Expect = 1e-05
Identities = 50/199 (25%), Positives = 71/199 (35%), Gaps = 18/199 (9%)
Query: 35 ELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRCTPACKPLRL 94
E T L L P+ + P LT +EP T +P
Sbjct: 314 EKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTP------------TTPKEPAST 361
Query: 95 PELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQS 154
PT T +P+T + P +++ P + P PA + P + +
Sbjct: 362 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA 421
Query: 155 TARGLPAKTRPKPPAP-APQQPALTEHQEPRAW--PEVLGLLVTAPEPRTKTRAQSRPRS 211
A T PK PAP P++PA T +EP E P P TK A + P+
Sbjct: 422 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE 481
Query: 212 PG--GPSLPS-TESRVPAP 227
P P P+ T + PAP
Sbjct: 482 PAPTAPKKPAPTTPKEPAP 500
Score = 47.4 bits (111), Expect = 1e-05
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 18/136 (13%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
P E PT +P SP+T + P +++ P ++ P P T +SA P++
Sbjct: 500 PTTPKEPAPTTTKEP-SPTTPKEPAPTTTKSAPTTTKEPA-PTTT---KSAPTTPKE--- 551
Query: 151 WPQSTARGLPAKTRPKPPAP-APQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRP 209
P T PA T PK PAP P++PA T +EP T EP T + P
Sbjct: 552 -PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP--------TTPKEPAPTTTKKPAP 602
Query: 210 RSPGGPSLPSTESRVP 225
+P P+ + + P
Sbjct: 603 TTPKEPAPTTPKETAP 618
Score = 42.4 bits (98), Expect = 3e-04
Identities = 46/155 (29%), Positives = 62/155 (40%), Gaps = 20/155 (12%)
Query: 88 ACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRK 147
A P E PT +P +P+T + P + + P + P G A T A P+K
Sbjct: 671 AAAPNTPKEPAPTTPKEP-APTTPKEPAPTTPKETAPTT--PKGTAPTTLKEPAPTTPKK 727
Query: 148 SG---------RWPQSTARGLPAKTRPKPPAP-APQQPALTEHQEPRAWPEVLGLLVTAP 197
+ P ST PA T PK AP P++PA T +EP T
Sbjct: 728 PAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLK 787
Query: 198 EPRTKTRAQSRPR-----SPGGPSLPSTESRVPAP 227
EP T + P+ + GP+ ST S PAP
Sbjct: 788 EPAPTTPKKPAPKELAPTTTKGPT--STTSDKPAP 820
Score = 41.6 bits (96), Expect = 6e-04
Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 15/126 (11%)
Query: 103 TQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAK 162
T P+ P+ + P + P P PA T P +A P+K T A
Sbjct: 579 TTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKL----TPTTPEKLAP 634
Query: 163 TRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTE 221
T P+ PAP P++ A T +EP T EP T + P +P P+ T
Sbjct: 635 TTPEKPAPTTPEELAPTTPEEPTP--------TTPEEPAPTTPKAAAPNTPKEPA--PTT 684
Query: 222 SRVPAP 227
+ PAP
Sbjct: 685 PKEPAP 690
Score = 39.3 bits (90), Expect = 0.003
Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 15/141 (10%)
Query: 99 PTLGTQPRSPSTGPDRVPRSSRRLPPESRR------PGGPAKTHPARSACCRPRK----S 148
PT +P +P+T + P + ++L P + P PA T P A P + +
Sbjct: 602 PTTPKEP-APTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTT 660
Query: 149 GRWPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAW--PEVLGLLVTAPEPRT-KTR 204
P T A PK PAP P++PA T +EP E P T K
Sbjct: 661 PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 720
Query: 205 AQSRPRSPGGPSLPSTESRVP 225
A + P+ P L T ++ P
Sbjct: 721 APTTPKKPAPKELAPTTTKEP 741
Score = 39.3 bits (90), Expect = 0.003
Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 33/151 (21%)
Query: 102 GTQPRSPSTGPDRVPRSSRRLPPESRRPGG---PAKTHPARSACCRPRK----SGRWPQS 154
GT P +P P+ P+ P PA T P + A P++ + + P S
Sbjct: 756 GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPA---PKELAPTTTKGPTS 812
Query: 155 TARGLPAKTRPKPPAPA---------PQQPALTEHQEPRAWPEVLGLLVTAPEPRT--KT 203
T PA T PK AP P++PA T + P + T EP T K+
Sbjct: 813 TTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKS 872
Query: 204 RAQSRP------------RSPGGPSLPSTES 222
+S P SP P +P+T++
Sbjct: 873 PDESTPELSAEPTPKALENSPKEPGVPTTKT 903
Score = 38.5 bits (88), Expect = 0.005
Identities = 46/199 (23%), Positives = 68/199 (34%), Gaps = 34/199 (17%)
Query: 31 GDLAELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRCTPACK 90
GD TPDT Q KV P +T + RP L +
Sbjct: 229 GDFKVTTPDTSTTQHN-----------KVSTSPKITTAKPINPRPS-LPPNSDTSKETSL 276
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGR 150
+ + T T + T D +++ +S P +P
Sbjct: 277 TVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKA- 335
Query: 151 WPQSTARGLPAKTRPKPPAPA-PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRP 209
++T +G PA T PK P P P++PA T +EP T T +S P
Sbjct: 336 --ETTTKG-PALTTPKEPTPTTPKEPASTTPKEP-----------------TPTTIKSAP 375
Query: 210 RSPGGPSLPSTESRVPAPK 228
+P P+ +T+S PK
Sbjct: 376 TTPKEPAPTTTKSAPTTPK 394
Score = 37.0 bits (84), Expect = 0.014
Identities = 42/165 (25%), Positives = 60/165 (36%), Gaps = 35/165 (21%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLP-----PESRRPGGPAKTHPARSACCRP 145
P E PT +P +P+T + P + P P P PA T P A P
Sbjct: 445 PTTPKEPAPTTPKEP-TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 503
Query: 146 RKSGRWPQSTARGLPAKTRPKPPAP--------------------A---PQQPALTEHQE 182
++ P T P+ T PK PAP A P++P+ T +E
Sbjct: 504 KE----PAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKE 559
Query: 183 PRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTESRVPAP 227
P T +P T + P +P P+ T ++ PAP
Sbjct: 560 PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPA--PTTTKKPAP 602
Score = 28.5 bits (62), Expect = 5.0
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 152 PQSTARGLPAKTRPKPPAPAPQQPAL-----TEHQEPRAWPEVLGLLVT-APEPRTKTRA 205
P+ TA+ T K P PQ+P T ++P+ P V T P T T
Sbjct: 1001 PEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPKTTPTPRKMTSTMP 1060
Query: 206 QSRPRSPGGPSLPSTESR 223
+ P S ++ T +R
Sbjct: 1061 ELNPTSRIAEAMLQTTTR 1078
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 49.3 bits (116), Expect = 3e-06
Identities = 49/152 (32%), Positives = 56/152 (36%), Gaps = 24/152 (15%)
Query: 87 PACKPLR---------LPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHP 137
PA PL+ LP P LG P PS P R P P RP HP
Sbjct: 763 PAAAPLKGPGPSSSPSLPHQAP-LGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHP 821
Query: 138 ARSACCRPRKSGRWPQSTARGLPAK-TRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTA 196
P G + G+P + P P AP P QP L +P PE G L A
Sbjct: 822 CPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQP---PE--GPLPPA 876
Query: 197 PE-PRTKTRAQSRPRSPGGPSLPSTESRVPAP 227
P P + T S S T SR+PAP
Sbjct: 877 PHLPPSST-------SSAVASSSETSSRLPAP 901
Score = 33.5 bits (75), Expect = 0.16
Identities = 37/160 (23%), Positives = 54/160 (33%), Gaps = 18/160 (11%)
Query: 85 CTPACKPLRLPEL--------LPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGP--AK 134
C P P LP + +P + P + GP + P + PPE P P
Sbjct: 822 CPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPP 881
Query: 135 THPARSACCRPRKSGRWPQSTARGL-----PAKTRPKPPAPAPQQPALTEHQEPRAWPEV 189
+ + + S R P T P++ K P P P + E P P
Sbjct: 882 SSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPPR 941
Query: 190 LGLLVTAP---EPRTKTRAQSRPRSPGGPSLPSTESRVPA 226
+VT P P+ K + + P G L + PA
Sbjct: 942 TFQMVTTPFPALPQPKALLERFHQVPSGIILQNKAGGAPA 981
Score = 28.1 bits (61), Expect = 6.5
Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Query: 152 PQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRS 211
P +T + RP PP P Q T P A PE L PR R R +
Sbjct: 1336 PPATLKVAEPPPRPPPPPPPTGQMNGTVDHPPPAAPERKPLGTAPHCPRLPLRKTYR-EN 1394
Query: 212 PGGPSLP 218
GGP P
Sbjct: 1395 VGGPGAP 1401
>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
sapiens]
Length = 776
Score = 47.8 bits (112), Expect = 8e-06
Identities = 61/231 (26%), Positives = 85/231 (36%), Gaps = 30/231 (12%)
Query: 18 FVDQPVVFPQERGGDLAELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREP------ 71
F P P+ RG L E T + L + PRG V R P L
Sbjct: 327 FPGAPGEGPEARGPSLGEDTKEADLPEPSEKQPAAAPRGKPVSRVPQLKARMVSKSKDGT 386
Query: 72 GARPEVLLVGARRCTPACK--PLRLPELLPTLGT-----QPRSPSTGPDRVPRSSRRLPP 124
G+ + R K P P+ PT G+ QP SP+ P+ P S + +
Sbjct: 387 GSDDKKAKTSTRSSAKTLKNRPCLSPKH-PTPGSSDPLIQPSSPAVCPEP-PSSPKHVSS 444
Query: 125 ESRRPGGPA------KTHPARSACCRPRKS---GRWPQSTARGLPAKTRPKPPAPAPQQP 175
+ R G K ++ PR + G+ Q+ A +PAKT P P P
Sbjct: 445 VTSRTGSSGAKEMKLKGADGKTKIATPRGAAPPGQKGQANATRIPAKTPPAPKTPPSSAT 504
Query: 176 ALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTESRVPA 226
+ + P A P EP K+ +S SPG P P + SR P+
Sbjct: 505 KQVQRRPPPAGPR-----SERGEP-PKSGDRSGYSSPGSPGTPGSRSRTPS 549
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 47.8 bits (112), Expect = 8e-06
Identities = 35/131 (26%), Positives = 48/131 (36%), Gaps = 6/131 (4%)
Query: 99 PTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTH---PARSACCRPRKSGRWPQST 155
PT+ T P+T P P ++ PP + P P T P + P + P +T
Sbjct: 1589 PTITTTTPPPTTTPSP-PTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT 1647
Query: 156 ARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGP 215
P T P PP P +T P + T P P T T P + P
Sbjct: 1648 TTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTT--P 1705
Query: 216 SLPSTESRVPA 226
S P T + P+
Sbjct: 1706 SSPITTTTTPS 1716
Score = 45.1 bits (105), Expect = 5e-05
Identities = 37/137 (27%), Positives = 47/137 (34%), Gaps = 8/137 (5%)
Query: 95 PELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAK---THPARSACCRPRKSGRW 151
P P+ T SP T P ++ PP + P P T PA + P +
Sbjct: 1466 PTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSP 1525
Query: 152 PQSTARGLPAKTRPKPPAPAP-QQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPR 210
P +T P T P PP P P T P P T P P T P
Sbjct: 1526 PTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTT----TPSPP 1581
Query: 211 SPGGPSLPSTESRVPAP 227
+ PS P+ + P P
Sbjct: 1582 TTTTPSPPTITTTTPPP 1598
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/149 (27%), Positives = 51/149 (34%), Gaps = 15/149 (10%)
Query: 86 TPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTH---PARSAC 142
TP+ P PT T P P+T P + PP + P P T P +
Sbjct: 1561 TPSPPPTTTTTPPPT--TTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTP 1618
Query: 143 CRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEHQEP--RAWPEVLGLLVTAPEPR 200
P + P ++ LP T P PP P T P P T P P
Sbjct: 1619 SPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPT 1678
Query: 201 TKTRAQSRPRSP--GGPSLPSTESRVPAP 227
T P SP PS P+T P+P
Sbjct: 1679 T------TPSSPITTTPSPPTTTMTTPSP 1701
Score = 38.5 bits (88), Expect = 0.005
Identities = 35/125 (28%), Positives = 41/125 (32%), Gaps = 25/125 (20%)
Query: 103 TQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAK 162
T P P+T P P S+ LPP + P P T P P +T P
Sbjct: 1397 TTPSPPTTTPSPPPTSTTTLPP-TTTPSPPTTTTTTPPPTTTPSP----PITTTTTPPPT 1451
Query: 163 TRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTES 222
T P PP P T P T P P T T PS P+T +
Sbjct: 1452 TTPSPPISTTTTPPPTTTPSPP---------TTTPSPPTTT-----------PSPPTTTT 1491
Query: 223 RVPAP 227
P P
Sbjct: 1492 TTPPP 1496
Score = 38.1 bits (87), Expect = 0.006
Identities = 37/142 (26%), Positives = 47/142 (33%), Gaps = 22/142 (15%)
Query: 99 PTLGTQPRSPSTGPDRVPRSSRRLPPESRR--PGGPAKTHPARSACCRPRKSGRWPQSTA 156
P T P P+T P P S+ LPP + P T P + P + P ++
Sbjct: 1494 PPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTST 1553
Query: 157 RGLPAKTRPKPP---------APAPQQPALTEHQEPRAWPEVLGLLVTAPEPRT----KT 203
LP T P PP P P T P + T P P T T
Sbjct: 1554 TTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPT-------ITTTTPPPTTTPSPPT 1606
Query: 204 RAQSRPRSPGGPSLPSTESRVP 225
+ P PS P+T P
Sbjct: 1607 TTTTTPPPTTTPSPPTTTPITP 1628
Score = 36.6 bits (83), Expect = 0.018
Identities = 36/129 (27%), Positives = 45/129 (34%), Gaps = 6/129 (4%)
Query: 99 PTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTH--PARSACCRPRKSGRWPQSTA 156
PT T P+T P P ++ PP + P P T P + P + P +T
Sbjct: 1425 PTTTTTTPPPTTTPSP-PITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTT 1483
Query: 157 RGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPS 216
P T PP P T P A L T P P T T P + PS
Sbjct: 1484 PSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLP-PTTTPSPPTTTTTTPPPTTT--PS 1540
Query: 217 LPSTESRVP 225
P+T P
Sbjct: 1541 PPTTTPITP 1549
Score = 35.0 bits (79), Expect = 0.053
Identities = 33/129 (25%), Positives = 43/129 (33%), Gaps = 18/129 (13%)
Query: 99 PTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARG 158
P T P P+T P P ++ PP + P T P+ P + P ++
Sbjct: 1464 PPPTTTPSPPTTTPS--PPTTTPSPPTTTTTTPPPTTTPSP-----PTTTPITPPASTTT 1516
Query: 159 LPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLP 218
LP T P PP P T P + T P T T PS P
Sbjct: 1517 LPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT-----------PSPP 1565
Query: 219 STESRVPAP 227
T + P P
Sbjct: 1566 PTTTTTPPP 1574
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 45.8 bits (107), Expect = 3e-05
Identities = 51/173 (29%), Positives = 62/173 (35%), Gaps = 40/173 (23%)
Query: 71 PGARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPG 130
PGA P + A A + P L P Q R P SS L P RRP
Sbjct: 313 PGAPPFL----ASSLLSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSS-LRPSQRRPR 367
Query: 131 GPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVL 190
P GR PQ+ P ++RP+ PAP PQ +L E +P P VL
Sbjct: 368 RPPTVFRLLE--------GRGPQT-----PRRSRPRAPAPVPQPFSLPEPSQP-ILPSVL 413
Query: 191 GLL---------------------VTAPEPRTKTRAQSRPRSPGGPSLPSTES 222
LL P P + + +PR P PSLP T S
Sbjct: 414 SLLGLPTPGPSHSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHPIQPSLPGTTS 466
Score = 32.7 bits (73), Expect = 0.26
Identities = 41/155 (26%), Positives = 54/155 (34%), Gaps = 27/155 (17%)
Query: 72 GARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGG 131
GA P++ + A P R+P P G P + P P S+ P + G
Sbjct: 129 GASPQMFHTVSPGPPSARPPCRVPPTTPLNG----GPGSLPPEPPSVSQAFPTLA----G 180
Query: 132 PAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLG 191
P P R A P SG S+ R LP P P P P PA++ + W L
Sbjct: 181 PGGLFPPRLA--DPVPSG--GSSSPRFLPRGNAPSPAPPPP--PAISLNAPSYNWGAAL- 233
Query: 192 LLVTAPEPRTKTRAQSRPRSPGGPSLPSTESRVPA 226
R+ P G P P S P+
Sbjct: 234 ------------RSSLVPSDLGSPPAPHASSSPPS 256
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 44.3 bits (103), Expect = 9e-05
Identities = 45/149 (30%), Positives = 59/149 (39%), Gaps = 22/149 (14%)
Query: 101 LGTQPRS-PSTGPDRVPRSSRRLPPE---------SRRPGGP-AKTHP--ARSACCRPRK 147
LGT P S P T P + P S P SR PG P A++ P A+ A P+K
Sbjct: 1077 LGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQK 1136
Query: 148 SGRWPQSTARGLPAKTRPKPPAPAPQQ--PALTEHQEPRAWPEVLGLLVTAPEPRTKTRA 205
P R P + P PAP Q P + + P + G + P P R
Sbjct: 1137 DPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARRE 1196
Query: 206 QSRPRSPG-------GPSLPSTESRVPAP 227
P+SPG G S PS ++ + P
Sbjct: 1197 MEAPKSPGTTRKDNIGRSQPSPQAGLAGP 1225
Score = 37.4 bits (85), Expect = 0.011
Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 105 PRSPSTGPDRVPRSSRR--LPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAK 162
P++ GP S+ R +PP + P ++H SA +S T++G
Sbjct: 1218 PQAGLAGPGPAGYSTARPTIPPRAGVISAP-QSHARASAGRLTPESQSKTSETSKGSTFL 1276
Query: 163 TRP-KPPAPAPQQ----PALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSL 217
P KP A P Q P QEP P + + P+P +T Q PRS SL
Sbjct: 1277 PEPLKPQAAFPPQSSLPPPAQRLQEPLV-PVAAPMPQSGPQPNLETPPQPPPRSRSSHSL 1335
Query: 218 PSTESRVPAPK 228
PS S P K
Sbjct: 1336 PSEASSQPQVK 1346
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 44.3 bits (103), Expect = 9e-05
Identities = 45/149 (30%), Positives = 59/149 (39%), Gaps = 22/149 (14%)
Query: 101 LGTQPRS-PSTGPDRVPRSSRRLPPE---------SRRPGGP-AKTHP--ARSACCRPRK 147
LGT P S P T P + P S P SR PG P A++ P A+ A P+K
Sbjct: 1077 LGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQK 1136
Query: 148 SGRWPQSTARGLPAKTRPKPPAPAPQQ--PALTEHQEPRAWPEVLGLLVTAPEPRTKTRA 205
P R P + P PAP Q P + + P + G + P P R
Sbjct: 1137 DPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARRE 1196
Query: 206 QSRPRSPG-------GPSLPSTESRVPAP 227
P+SPG G S PS ++ + P
Sbjct: 1197 MEAPKSPGTTRKDNIGRSQPSPQAGLAGP 1225
Score = 36.6 bits (83), Expect = 0.018
Identities = 38/128 (29%), Positives = 52/128 (40%), Gaps = 9/128 (7%)
Query: 105 PRSPSTGPDRVPRSSRR--LPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAK 162
P++ GP S+ R +PP + P ++H SA +S T++G
Sbjct: 1218 PQAGLAGPGPAGYSTARPTIPPRAGVISAP-QSHARASAGRLTPESQSKTSETSKGSTFL 1276
Query: 163 TRP-KPPAPAPQQ----PALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSL 217
P KP A P Q P QEP P + + P+P +T Q PRS SL
Sbjct: 1277 PEPLKPQAAFPPQSSLPPPAQRLQEPLV-PVAAPMPQSGPQPNLETPPQPPPRSRSSHSL 1335
Query: 218 PSTESRVP 225
PS S P
Sbjct: 1336 PSEASSQP 1343
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 43.9 bits (102), Expect = 1e-04
Identities = 53/187 (28%), Positives = 69/187 (36%), Gaps = 29/187 (15%)
Query: 53 GPRGWKVGRRPNLTCDREPGARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGP 112
GP + + C E A P + TP PE P ++ S GP
Sbjct: 379 GPCAPATDKAEEVVCAPEDVASPFPTAIPEGDTTP-------PETDPAATSEAPSARDGP 431
Query: 113 DR-VPRSSRRLPP----ESRRPGGP-------AKTHPARSACCRPRKSGRWPQSTARGLP 160
+R VP+ + PP E + P GP A+T P R A P + G P STA P
Sbjct: 432 ERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPERIGTEP-STA---P 487
Query: 161 AKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPST 220
A + P P + +PA + P A P L A P + S P P
Sbjct: 488 APSPPAPKSCLKHRPAAAS-EGPAASPP----LAAAESPPVEPGPGSLDAEAAAPERPKA 542
Query: 221 ESRVPAP 227
E R AP
Sbjct: 543 E-RAEAP 548
Score = 40.8 bits (94), Expect = 0.001
Identities = 45/155 (29%), Positives = 58/155 (37%), Gaps = 15/155 (9%)
Query: 87 PACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPA--KTHPARSACCR 144
PA L PE PTL +P SP GP + E+ P GP T A C
Sbjct: 336 PATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEA-PPAGPCAPATDKAEEVVCA 394
Query: 145 PRK-SGRWPQSTARG--LPAKTRPKPPAPAPQQ---PALTEHQEPRAWPEVL-----GLL 193
P + +P + G P +T P + AP P + +E P VL G
Sbjct: 395 PEDVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPP 454
Query: 194 VTAPEPRTKTRAQSRPRSPGGPSLPSTE-SRVPAP 227
APEP + + + P TE S PAP
Sbjct: 455 GPAPEPEREAETEPERGAGTEPERIGTEPSTAPAP 489
Score = 28.5 bits (62), Expect = 5.0
Identities = 26/99 (26%), Positives = 32/99 (32%), Gaps = 15/99 (15%)
Query: 100 TLGTQPRSPSTGP-DRVPRSSRR--------------LPPESRRPGGPAKTHPARSACCR 144
TL QP P GP +R PR R LPP + PG + P R
Sbjct: 772 TLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGADGQPAPPWITVTR 831
Query: 145 PRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEHQEP 183
++ G Q + R P Q QEP
Sbjct: 832 QKRRGTLDQPPNQEDKPGARTLKSEPGKQAKVPERGQEP 870
Score = 28.1 bits (61), Expect = 6.5
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 14/67 (20%)
Query: 124 PESRRPG-------GPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPA 176
P+ +PG GP + ++ PRKS PQ A A + P PA Q+PA
Sbjct: 622 PQHAKPGPRKLAERGPQDSGDRAASPAGPRKS---PQEAA----AAPGTREPCPAAQEPA 674
Query: 177 LTEHQEP 183
+E + P
Sbjct: 675 PSEDRNP 681
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 43.9 bits (102), Expect = 1e-04
Identities = 45/173 (26%), Positives = 61/173 (35%), Gaps = 35/173 (20%)
Query: 81 GARRCTPACK---PLRLPELLPTLGTQPRSPSTG--PDRVPRSSRRLPPESRRPGGPAKT 135
G R C P + P E + + P P+ G P R P +S P SR P PA
Sbjct: 130 GVRSCAPPGRCPAPPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSSRPPSPPA-- 187
Query: 136 HPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALT----------------E 179
P G P+ G PA+ PP AP+ PA + E
Sbjct: 188 ----GLSTEPAGPGTAPRPFLPGQPAEVDGNPPPAAPEAPAASPSTASPAPAAPGDLRQE 243
Query: 180 H-----QEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTESRVPAP 227
H + + W G + P R R RP + G + + R+PAP
Sbjct: 244 HFDRLIRRSKLWCYAKGFALDTPSLR---RGPERPPAKGPARGAAKKRRLPAP 293
Score = 29.3 bits (64), Expect = 2.9
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 99 PTLGTQP-RSPSTGPDRVPRSSRRL---PPESRRPGGPAKTHPARS 140
P+L P R P+ GP R RRL PP + +P PA T P S
Sbjct: 266 PSLRRGPERPPAKGPARGAAKKRRLPAPPPRTAQPRRPAPTLPTTS 311
>gi|89886237 cyclin I family, member 2 [Homo sapiens]
Length = 369
Score = 43.9 bits (102), Expect = 1e-04
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 105 PRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSAC-CRPRKSGRWPQSTARGLPAKT 163
P PS G +PRS+R P +R+PG A H A +A RPR+ TA +PA
Sbjct: 38 PLPPSPGEAPLPRSNRSRCPGTRQPGA-ASLHAASAAVPVRPRRGTAPAGKTADAVPAAA 96
Query: 164 RPKPPAPAPQ 173
+ P PAPQ
Sbjct: 97 PEQAPRPAPQ 106
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 43.5 bits (101), Expect = 2e-04
Identities = 53/180 (29%), Positives = 61/180 (33%), Gaps = 50/180 (27%)
Query: 74 RPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVP-----------RSSRRL 122
R E LL G R C P LP P+ P P P R R +
Sbjct: 320 RTETLLPGPRPC---------PSPLPPPPAPPKGPPAPPAATPAGVYTVFREQGREHRVV 370
Query: 123 PPE--------SRRPGGPAKTHPARSACCRPRKSGR-----------WPQSTARGLPAKT 163
P RPG AR A R R++GR P GL K
Sbjct: 371 APTFVPSVEAFDERPGPIQIASQARDARAREREAGRPGVLQAPPGSPRPLDRPEGLREKN 430
Query: 164 -------RPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPS 216
RP PPA AP A +PRA+ LL +PR RA PR P GP+
Sbjct: 431 SVIRSLKRP-PPADAPTVRATRASPDPRAYVPAKELLKPEADPRPCERA---PRGPAGPA 486
Score = 34.7 bits (78), Expect = 0.070
Identities = 31/111 (27%), Positives = 40/111 (36%), Gaps = 13/111 (11%)
Query: 124 PESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEHQEP 183
P P P P S+ +KS P P K RP PP P+P PA T P
Sbjct: 2353 PTDEVPSTPLALEP--SSTPGSKKSPPEPVDKRAKAP-KARPAPPQPSPAPPAFTSCPAP 2409
Query: 184 RAWPEV--------LGLLVTAPEPRTKTRAQSRPRSPG--GPSLPSTESRV 224
+ E+ L+T P R K + G GP P E+ +
Sbjct: 2410 EPFAELPAPATSLAPAPLITMPATRPKPKKARAAEESGAKGPRRPGEEAEL 2460
Score = 28.9 bits (63), Expect = 3.8
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 162 KTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAP-EPRTKTRAQSRPRSPGGPSLPST 220
K RP +P + PA + Q P P T P +P+ + A+SRP+ G LP+T
Sbjct: 2709 KARPSAHSPGKKTPA-PQPQAPPPQP-------TQPLQPKAQAGAKSRPKKREGVHLPTT 2760
Query: 221 E 221
+
Sbjct: 2761 K 2761
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 43.1 bits (100), Expect = 2e-04
Identities = 47/154 (30%), Positives = 61/154 (39%), Gaps = 27/154 (17%)
Query: 96 ELLPTLG-TQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQS 154
ELL +L T+ P +GP ++ P + P P P R ++ W
Sbjct: 442 ELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAP--PTPPRPRDGGTPRHSRALSWAAR 499
Query: 155 TARGLPAKT-RPKPPAPAPQQP--------------ALTEHQEPRA-WPEVLGLLV-TAP 197
AR LP R PP PA +QP A PRA WP G+ + P
Sbjct: 500 AARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRP 559
Query: 198 EPRTKTRAQSRPRSP-----GGPSLPSTESRVPA 226
PR + RA RP P GGP +T+ R PA
Sbjct: 560 LPRVQLRAPPRPPRPHGRRTGGPQ--ATQPRPPA 591
Score = 32.0 bits (71), Expect = 0.45
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 105 PRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAKT 163
PR P R PR P RR GGP T P A + + GR Q+ G A T
Sbjct: 561 PRVQLRAPPRPPR------PHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPT 613
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 43.1 bits (100), Expect = 2e-04
Identities = 52/197 (26%), Positives = 73/197 (37%), Gaps = 39/197 (19%)
Query: 45 LRSTLRLRGPRGWKVGR---------RPNLTCDREPGARPEVLLVGARRCTPACKPLRL- 94
LRS + +R GW R + T R P +P V +R +P P
Sbjct: 249 LRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPP--QPRVCTFSPQRVSPTTSPRPAS 306
Query: 95 -----------PELLPTLGTQPRSPSTGPDRVPRSSRRLPPE--SRRPGGPAKTHPARSA 141
PE+ P RS GP+ PR +LPP SRR G + + + +
Sbjct: 307 PVPGSERRGSRPEMTPV---SLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQ 363
Query: 142 C----CRPRKSGRWPQST------ARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLG 191
R +G P+ G PA R +PPA Q + PR P G
Sbjct: 364 SGPLGTRSDDTGTGPRRERPSRRLTTGTPASPR-RPPALRSQSRDRLDRGRPRGAPGGRG 422
Query: 192 LLVTAPEPRTKTRAQSR 208
++ P P + R+QSR
Sbjct: 423 AQLSVPSPARRARSQSR 439
Score = 33.5 bits (75), Expect = 0.16
Identities = 40/135 (29%), Positives = 50/135 (37%), Gaps = 18/135 (13%)
Query: 101 LGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLP 160
LGT+ TGP R R SRRL G PA P R R + R + RG P
Sbjct: 367 LGTRSDDTGTGPRR-ERPSRRLTT-----GTPAS--PRRPPALRSQSRDRLDRGRPRGAP 418
Query: 161 AKTRPKPPAPAPQQPALTEHQEPRAWPEVL----GLLVTAPEPR------TKTRAQSRPR 210
+ P+P + A ++ +E +A V G P R T R R
Sbjct: 419 GGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRAR 478
Query: 211 SPGGPSLPSTESRVP 225
SP P L S P
Sbjct: 479 SPAAPRLSRVSSPSP 493
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 43.1 bits (100), Expect = 2e-04
Identities = 52/197 (26%), Positives = 73/197 (37%), Gaps = 39/197 (19%)
Query: 45 LRSTLRLRGPRGWKVGR---------RPNLTCDREPGARPEVLLVGARRCTPACKPLRL- 94
LRS + +R GW R + T R P +P V +R +P P
Sbjct: 249 LRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPP--QPRVCTFSPQRVSPTTSPRPAS 306
Query: 95 -----------PELLPTLGTQPRSPSTGPDRVPRSSRRLPPE--SRRPGGPAKTHPARSA 141
PE+ P RS GP+ PR +LPP SRR G + + + +
Sbjct: 307 PVPGSERRGSRPEMTPV---SLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQ 363
Query: 142 C----CRPRKSGRWPQST------ARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLG 191
R +G P+ G PA R +PPA Q + PR P G
Sbjct: 364 SGPLGTRSDDTGTGPRRERPSRRLTTGTPASPR-RPPALRSQSRDRLDRGRPRGAPGGRG 422
Query: 192 LLVTAPEPRTKTRAQSR 208
++ P P + R+QSR
Sbjct: 423 AQLSVPSPARRARSQSR 439
Score = 33.5 bits (75), Expect = 0.16
Identities = 40/135 (29%), Positives = 50/135 (37%), Gaps = 18/135 (13%)
Query: 101 LGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLP 160
LGT+ TGP R R SRRL G PA P R R + R + RG P
Sbjct: 367 LGTRSDDTGTGPRR-ERPSRRLTT-----GTPAS--PRRPPALRSQSRDRLDRGRPRGAP 418
Query: 161 AKTRPKPPAPAPQQPALTEHQEPRAWPEVL----GLLVTAPEPR------TKTRAQSRPR 210
+ P+P + A ++ +E +A V G P R T R R
Sbjct: 419 GGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRAR 478
Query: 211 SPGGPSLPSTESRVP 225
SP P L S P
Sbjct: 479 SPAAPRLSRVSSPSP 493
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 43.1 bits (100), Expect = 2e-04
Identities = 43/146 (29%), Positives = 54/146 (36%), Gaps = 17/146 (11%)
Query: 87 PACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPR 146
PA P P L L T P + P V PP + GGPA T P + A P
Sbjct: 1267 PAATP---PSLKGGLATPPHKGAPNPAVVT------PPSPK--GGPA-TSPPKGAPTPPA 1314
Query: 147 KSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQ 206
+ P+ + P K P PPA P P T P P G T T
Sbjct: 1315 ATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTP-TLPATTPSSKGGPTTPSSKEGPTPPA 1373
Query: 207 SRPRSPGGPSL----PSTESRVPAPK 228
+ P GGP++ P +P+PK
Sbjct: 1374 ATPSHKGGPAMTPPSPKRGPAIPSPK 1399
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/141 (26%), Positives = 48/141 (34%), Gaps = 24/141 (17%)
Query: 105 PRSPSTGPDRVPRSSRRLPPESRRP---GG----PAKTHPARSACCRPRKSGRWPQSTAR 157
P SP GP +PP + P GG P K P A P G +
Sbjct: 1087 PPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPK 1146
Query: 158 GLPAKTRPKPPAP-----------APQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQ 206
G P PP+P AP PA T P+ GL +P+ T A
Sbjct: 1147 GAPTTPAATPPSPKGGLATPPPKGAPTTPAATP-PSPKG-----GLATPSPKGAPTTPAA 1200
Query: 207 SRPRSPGGPSLPSTESRVPAP 227
+ P GG + PS + P
Sbjct: 1201 TPPSPKGGLATPSPKGAPTTP 1221
Score = 38.1 bits (87), Expect = 0.006
Identities = 42/146 (28%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 105 PRSPSTGPDRVPRSSRRLPPESRRPGGPA----KTHPARSACCRPRKSGRWPQSTARGLP 160
P SPS P P PP + GGPA K P A P G + +G P
Sbjct: 931 PASPS--PKGAPTPPAATPPSPK--GGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAP 986
Query: 161 AKTRPKPPAP-----------APQQPALTEHQ---EPRAWPEVLGL----LVTAPEPRTK 202
PP+P AP PA+T P A P G T P P+
Sbjct: 987 TPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGS 1046
Query: 203 TRAQSRPRSPGGPSLPSTESRVPAPK 228
A P+ G P+ P+ + +P+PK
Sbjct: 1047 PAATPLPK--GAPTTPA--ATLPSPK 1068
Score = 37.0 bits (84), Expect = 0.014
Identities = 39/145 (26%), Positives = 51/145 (35%), Gaps = 13/145 (8%)
Query: 86 TPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRP---GGPAKTHPARSAC 142
TP P+ PTL S GP P S P + P GGPA T P+
Sbjct: 1334 TPPAVTPPSPKGTPTLPATTPSSKGGPT-TPSSKEGPTPPAATPSHKGGPAMTPPS---- 1388
Query: 143 CRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTK 202
P++ P P P AP P +E A P L A P +
Sbjct: 1389 --PKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVT---REGAATPSKGDLTPPAVTPVSL 1443
Query: 203 TRAQSRPRSPGGPSLPSTESRVPAP 227
+A + GGP+ PS++ P
Sbjct: 1444 KKAPATSAPKGGPATPSSKGDPTLP 1468
Score = 34.3 bits (77), Expect = 0.091
Identities = 35/133 (26%), Positives = 40/133 (30%), Gaps = 22/133 (16%)
Query: 100 TLGTQPRSPSTG-----PDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQS 154
T P SP G P P + PP P G T + A P + P+
Sbjct: 1197 TPAATPPSPKGGLATPSPKGAPTTPAATPPS---PKGGLATPSPKGAPTTPAATPPSPKG 1253
Query: 155 TARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGG 214
P K P PPA P P + G L T P A P SP G
Sbjct: 1254 GPATPPPKGAPTPPAATP--------------PSLKGGLATPPHKGAPNPAVVTPPSPKG 1299
Query: 215 PSLPSTESRVPAP 227
S P P
Sbjct: 1300 GPATSPPKGAPTP 1312
Score = 31.6 bits (70), Expect = 0.59
Identities = 34/137 (24%), Positives = 44/137 (32%), Gaps = 30/137 (21%)
Query: 100 TLGTQPRSPSTG-----PDRVPRSSRRLPPESRRPGGPA----KTHPARSACCRPRKSGR 150
T P SP G P P + PP + GG A K P A P G
Sbjct: 1151 TPAATPPSPKGGLATPPPKGAPTTPAATPPSPK--GGLATPSPKGAPTTPAATPPSPKGG 1208
Query: 151 WPQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPR 210
+ +G P PP+P GL +P+ T A + P
Sbjct: 1209 LATPSPKGAPTTPAATPPSPKG------------------GLATPSPKGAPTTPAATPPS 1250
Query: 211 SPGGPSLPSTESRVPAP 227
GGP+ P + P P
Sbjct: 1251 PKGGPATPPPKG-APTP 1266
Score = 31.2 bits (69), Expect = 0.77
Identities = 38/154 (24%), Positives = 52/154 (33%), Gaps = 26/154 (16%)
Query: 91 PLRLPELLPTLGTQPRSPSTGPDRV----PRSSRRLPPESRRPGGPAKTHPARSACCRPR 146
P + L P T P + P V P+ P + P + + A P
Sbjct: 867 PSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPA 926
Query: 147 KSGRWPQSTARGLPAKTRPKPPAP-----------APQQPALTEHQEPRAWPEVLGLLVT 195
G + +G P PP+P AP PA T P+ P
Sbjct: 927 PKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATP-PSPKGGP-------A 978
Query: 196 APEPR-TKTRAQSRPRSP-GGPSLPSTESRVPAP 227
P P+ T + P SP GGP+ PS + P P
Sbjct: 979 TPSPKGAPTPPAATPPSPKGGPATPSPKG-APTP 1011
Score = 31.2 bits (69), Expect = 0.77
Identities = 39/152 (25%), Positives = 48/152 (31%), Gaps = 19/152 (12%)
Query: 86 TPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRP 145
TP P+ P P+ ST P P S + P + P G P A P
Sbjct: 1010 TPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGA----PTTPAATLP 1065
Query: 146 RKSGRWPQSTARGLPAKTRPKPPAPAPQQP--------ALTEHQEPRAW-PEVLGLLVTA 196
G + +G P PPA P P P A P G L T
Sbjct: 1066 SPKGGPATPSLKGAPT-----PPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATP 1120
Query: 197 PEPRTKTRAQSRPRSP-GGPSLPSTESRVPAP 227
P T + P SP GG + P + P
Sbjct: 1121 PHKGAPTTPAATPPSPKGGLATPPPKGAPTTP 1152
Score = 30.4 bits (67), Expect = 1.3
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 20/111 (18%)
Query: 108 PSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKP 167
P + VP + + LP +P P SA + A G P T P P
Sbjct: 2 PGEATETVPATEQELP----QPQAETAVLPMSSALS---------VTAALGQPGPTLPPP 48
Query: 168 PAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLP 218
+PAPQQ L+ + +P + T E P+S G +LP
Sbjct: 49 CSPAPQQCPLSAANQASPFPSPSTIASTPLE-------VPFPQSSSGTALP 92
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 42.7 bits (99), Expect = 3e-04
Identities = 56/212 (26%), Positives = 78/212 (36%), Gaps = 23/212 (10%)
Query: 33 LAELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRCTPACKPL 92
++ L P + + S R P R P L + + G+ P L R + +P
Sbjct: 1027 VSPLEPSPEKVATISPRRHAMPGSRPRSRIPVLLSEEDTGSEPSGSLSAKERWSKRARPQ 1086
Query: 93 ----------RLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSAC 142
R LL L + S S+ R R+S L PA + A
Sbjct: 1087 QDLARLVMEKRQGRLLLRLASGASSSSSEEQR--RASETLSGTGSEEDTPA----SEPAA 1140
Query: 143 CRPRKSGRWPQSTARGLPAKTRPKPPAP-APQQPALTEH-QEPRAWPEVLGLLVTAPEPR 200
PRKSGR + +R +P + P P A QQPA H P + L P
Sbjct: 1141 ALPRKSGRAAATRSR-IPRPIGLRMPMPVAAQQPASRSHGAAPALDTAITSRLQLQTPPG 1199
Query: 201 TKTRAQSRPRSPG----GPSLPSTESRVPAPK 228
+ T A RP+ P GP +R PAP+
Sbjct: 1200 SATAADLRPKQPPGRGLGPGRAQAGARPPAPR 1231
Score = 36.2 bits (82), Expect = 0.024
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Query: 104 QPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSG----RWPQSTARGL 159
QP GP R +R PP R P PA T AR+A PR P + +
Sbjct: 1210 QPPGRGLGPGRAQAGAR--PPAPRSPRLPASTSAARNASASPRSQSLSRRESPSPSHQAR 1267
Query: 160 PAKTRPKPPAPAPQQP 175
P P+ PA QP
Sbjct: 1268 PGVPPPRGVPPARAQP 1283
>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
Length = 977
Score = 42.7 bits (99), Expect = 3e-04
Identities = 43/157 (27%), Positives = 60/157 (38%), Gaps = 17/157 (10%)
Query: 72 GARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGG 131
G RP V R P L L P P S GP +P + +P + G
Sbjct: 477 GQRPTTTSVIFRPLAPKRANDSLGGLSPA--PPPFLSSQGPTPLPSFTSGVPSHAPVSGS 534
Query: 132 PAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLG 191
P+ PR SG +++ +PA +RP P AP+ PA A
Sbjct: 535 PST----------PRSSGPVTATSSLYIPAPSRPVTPGGAPEPPA---PPSAAAMTSTAS 581
Query: 192 LLVTAPEPRTKTRAQSRPRSPGGPSLPST-ESRVPAP 227
+ ++AP R R ++ PG P PS E R+ P
Sbjct: 582 IFLSAP-LRPSARPEAPAPGPGAPEPPSAREQRISVP 617
Score = 27.7 bits (60), Expect = 8.5
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 99 PTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARG 158
P LG +PRSPS P P S + P R P A P S +PQ+ AR
Sbjct: 780 PGLGPRPRSPSPTPSLPP--SWKYSPNIRAPPPIA---------YNPLLSPFFPQA-ART 827
Query: 159 LPAKTRPKPPAPAPQQ 174
LP K + + P P+Q
Sbjct: 828 LP-KAQSQGPRATPKQ 842
>gi|50301232 synaptopodin 2-like isoform b [Homo sapiens]
Length = 753
Score = 42.7 bits (99), Expect = 3e-04
Identities = 43/157 (27%), Positives = 60/157 (38%), Gaps = 17/157 (10%)
Query: 72 GARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGG 131
G RP V R P L L P P S GP +P + +P + G
Sbjct: 253 GQRPTTTSVIFRPLAPKRANDSLGGLSPA--PPPFLSSQGPTPLPSFTSGVPSHAPVSGS 310
Query: 132 PAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEHQEPRAWPEVLG 191
P+ PR SG +++ +PA +RP P AP+ PA A
Sbjct: 311 PST----------PRSSGPVTATSSLYIPAPSRPVTPGGAPEPPA---PPSAAAMTSTAS 357
Query: 192 LLVTAPEPRTKTRAQSRPRSPGGPSLPST-ESRVPAP 227
+ ++AP R R ++ PG P PS E R+ P
Sbjct: 358 IFLSAP-LRPSARPEAPAPGPGAPEPPSAREQRISVP 393
Score = 27.7 bits (60), Expect = 8.5
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 99 PTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARG 158
P LG +PRSPS P P S + P R P A P S +PQ+ AR
Sbjct: 556 PGLGPRPRSPSPTPSLPP--SWKYSPNIRAPPPIA---------YNPLLSPFFPQA-ART 603
Query: 159 LPAKTRPKPPAPAPQQ 174
LP K + + P P+Q
Sbjct: 604 LP-KAQSQGPRATPKQ 618
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 42.7 bits (99), Expect = 3e-04
Identities = 61/232 (26%), Positives = 85/232 (36%), Gaps = 53/232 (22%)
Query: 26 PQERGGDLAELTPDTQLLQLRSTLRLRGPRGWKVGRR--PNLTCDREPGARPEVLLVGAR 83
P R L E +Q ++L RG W G P L REP A P L +
Sbjct: 24 PDSRRTSLVEPEMTSQAMRLT-----RGLGVWFPGSATPPGLMVPREPQASPSTLPLTLE 78
Query: 84 RCTPACKPLRLPELLPTLGTQPRSPS----TGPDR--------VPRSSRRLPPESRRPGG 131
R +P P PE + P +P+ GP + VPR R L R G
Sbjct: 79 RPSPVMPP---PEEAAAVSAPPPAPAGTLLPGPSKWQKPAGTPVPRIRRLLEASHRGQGD 135
Query: 132 PAKTHPARS---------ACCRPRKSGRWPQSTARGLPAKT-RPKPPAPAPQQPALTEHQ 181
P P + PR ++P P +T +P PP P+ +QPA
Sbjct: 136 PPSLRPLKPPPPPRQLSVKDTVPRAPSQFPP------PLETWKPPPPLPSERQPA----- 184
Query: 182 EPRAWPEVLGLLVTAPEPRTKTRA------QSRPRSPGGPSLPSTESRVPAP 227
+ R P L T P T+++A Q+ R+ GG + E + P
Sbjct: 185 DRRITP----ALATPASPPTESQAGPRNQGQTAGRARGGAPPHAGEGEMAQP 232
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 42.4 bits (98), Expect = 3e-04
Identities = 45/149 (30%), Positives = 59/149 (39%), Gaps = 5/149 (3%)
Query: 26 PQERGGDLAELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRC 85
P+E G D AE + ++ S+L+ P GRR + D G R E L GARR
Sbjct: 105 PEEEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRL-CSLDVLRGVRLE--LAGARRR 161
Query: 86 TPACKPLRLPELL--PTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACC 143
K + P L G + S P + PRS+ P + P PA +A
Sbjct: 162 LSEGKLVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGA 221
Query: 144 RPRKSGRWPQSTARGLPAKTRPKPPAPAP 172
P P R LPA RP +P P
Sbjct: 222 IPPLRSHKPTVAVRILPAPPRPPISSPGP 250
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 42.4 bits (98), Expect = 3e-04
Identities = 45/149 (30%), Positives = 59/149 (39%), Gaps = 5/149 (3%)
Query: 26 PQERGGDLAELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRC 85
P+E G D AE + ++ S+L+ P GRR + D G R E L GARR
Sbjct: 105 PEEEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRL-CSLDVLRGVRLE--LAGARRR 161
Query: 86 TPACKPLRLPELL--PTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACC 143
K + P L G + S P + PRS+ P + P PA +A
Sbjct: 162 LSEGKLVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGA 221
Query: 144 RPRKSGRWPQSTARGLPAKTRPKPPAPAP 172
P P R LPA RP +P P
Sbjct: 222 IPPLRSHKPTVAVRILPAPPRPPISSPGP 250
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 42.4 bits (98), Expect = 3e-04
Identities = 45/149 (30%), Positives = 59/149 (39%), Gaps = 5/149 (3%)
Query: 26 PQERGGDLAELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLLVGARRC 85
P+E G D AE + ++ S+L+ P GRR + D G R E L GARR
Sbjct: 105 PEEEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRL-CSLDVLRGVRLE--LAGARRR 161
Query: 86 TPACKPLRLPELL--PTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACC 143
K + P L G + S P + PRS+ P + P PA +A
Sbjct: 162 LSEGKLVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGA 221
Query: 144 RPRKSGRWPQSTARGLPAKTRPKPPAPAP 172
P P R LPA RP +P P
Sbjct: 222 IPPLRSHKPTVAVRILPAPPRPPISSPGP 250
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 42.4 bits (98), Expect = 3e-04
Identities = 62/235 (26%), Positives = 90/235 (38%), Gaps = 43/235 (18%)
Query: 21 QPVVFPQERGGDLAELTPDTQLLQLRSTLRLRGPRGW--KVGRRPNLTCDRE-PGARPEV 77
+P PQER ++ +PD++ + R+ LR R G +V + L+ R G+ PEV
Sbjct: 1548 KPSASPQERSE--SDSSPDSKA-KTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEV 1604
Query: 78 LLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRR---PGGPAK 134
KP P + P + P +PR SR R P G +
Sbjct: 1605 ----------KDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSS 1654
Query: 135 T-----HPARSACCR--------PRKSGRWP--QSTARGLPAKTRP----KPPAPAPQQP 175
T HP +S R P+ R P + ++R P TR + A P
Sbjct: 1655 TESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSP 1714
Query: 176 ALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPST--ESRVPAPK 228
PR V++PEP K+R+ R RS P +T R P+PK
Sbjct: 1715 ETRSRTPPR---HRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPK 1766
Score = 36.2 bits (82), Expect = 0.024
Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 79 LVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPE------SRRPGGP 132
L G+ C P K P + +QP++ S P R RSS PP+ SR+
Sbjct: 779 LSGSSPC-PKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSS 837
Query: 133 AKTHPARSACCRPRK-SGRWPQSTARGLPAKTR--------PKPPAPAPQQPALTEHQEP 183
+ HP + PR+ S PQ+ + + + R P+ + P + + + P
Sbjct: 838 SSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPP 897
Query: 184 RAW----PEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPS 219
R P ++P+P+ K R RS G S PS
Sbjct: 898 RVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPS 937
Score = 32.3 bits (72), Expect = 0.35
Identities = 42/172 (24%), Positives = 66/172 (38%), Gaps = 21/172 (12%)
Query: 69 REPGARPEVLLVGARRCTPACKPLRLP--------ELLPTLGTQPRSPSTGPD--RVPRS 118
R + P R +P+ KP L E T + RS S+ R RS
Sbjct: 1745 RRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRS 1804
Query: 119 SRRLPPESRRPGG-------PAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPA 171
R RR GG PA+ +R++ R R R P ++ + ++T P P +
Sbjct: 1805 RSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRS 1864
Query: 172 PQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPSLPSTESR 223
+ + H+ R+ L++ R++T SR RS S+ SR
Sbjct: 1865 RSRASPATHRRSRSRTP----LISRRRSRSRTSPVSRRRSRSRTSVTRRRSR 1912
Score = 30.0 bits (66), Expect = 1.7
Identities = 38/147 (25%), Positives = 53/147 (36%), Gaps = 38/147 (25%)
Query: 87 PACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPR 146
P + P T QP SP D+ + + T P+ S P
Sbjct: 313 PGTTSTQRPSSPETATKQPSSPYEDKDKDKKEK-------------SATRPSPS----PE 355
Query: 147 KSGRWPQSTARGLPAKTRPKPPAPAPQQPALTEHQ----EPRAWPEVLGLLVTAPEPRTK 202
+S T P+PPAP P L E +P A + V P +
Sbjct: 356 RS-------------STGPEPPAPT---PLLAERHGGSPQPLATTPLSQEPVNPPSEASP 399
Query: 203 TRAQSRPRSPGG-PSLPSTESRVPAPK 228
TR +S P+SP P S+ES P+P+
Sbjct: 400 TRDRSPPKSPEKLPQSSSSESSPPSPQ 426
Score = 30.0 bits (66), Expect = 1.7
Identities = 40/138 (28%), Positives = 48/138 (34%), Gaps = 21/138 (15%)
Query: 103 TQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAK 162
T+ RS S P + R SR SR P P K +RS R+S TARG +
Sbjct: 2014 TRRRSRSRTPPAIRRRSR-----SRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSL 2068
Query: 163 TRPKPP-------------APAPQQPALTEHQEPRAWPEVL--GLLVTAPEPRTKTRAQS 207
TR P + + PA H R P L + P
Sbjct: 2069 TRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLD 2128
Query: 208 RPRSPGGPSLPSTESRVP 225
R RSPG P SR P
Sbjct: 2129 RCRSPGMLE-PLGSSRTP 2145
Score = 28.9 bits (63), Expect = 3.8
Identities = 37/128 (28%), Positives = 49/128 (38%), Gaps = 14/128 (10%)
Query: 103 TQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAK 162
T+ RS S P RS R PP +RR ++T P R R R T R ++
Sbjct: 1931 TRRRSRSRTPTTRRRSRSRTPPVTRR-RSRSRTPPV----TRRRSRSRTSPITRRRSRSR 1985
Query: 163 TRP--KPPAPAPQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPG-GPSLPS 219
T P + + + P R P VT R++T R RS P LP
Sbjct: 1986 TSPVTRRRSRSRTSPVTRRRSRSRTSP------VTRRRSRSRTPPAIRRRSRSRTPLLPR 2039
Query: 220 TESRVPAP 227
SR +P
Sbjct: 2040 KRSRSRSP 2047
Score = 28.5 bits (62), Expect = 5.0
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
Query: 103 TQPRSPSTGPDRVPR--SSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLP 160
+ P GP +P+ S ++ PP RR P K P S R +S +
Sbjct: 2647 SSPSPAKPGPQALPKPASPKKPPPGERRSRSPRK----------PIDSLRDSRSLSYSPV 2696
Query: 161 AKTRPKP-PAPAPQQPALTEHQEPR 184
+ RP P P+P QQ + +E R
Sbjct: 2697 ERRRPSPQPSPRDQQSSSSERGSRR 2721
>gi|68563515 keratinocyte proline-rich protein [Homo sapiens]
Length = 579
Score = 42.4 bits (98), Expect = 3e-04
Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 19/152 (12%)
Query: 61 RRPNLTCDREPGARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSR 120
RRP +C + G + + + + C P R P +P + + RS S GP P
Sbjct: 311 RRPISSCSQRRGPKCRIE-ISSPCCPRQVPPQRCPVEIPPI--RRRSQSCGPQ--PSWGA 365
Query: 121 RLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQ---QPAL 177
P RP + P+ C PR+ + P+S + P PPAP P+ +P +
Sbjct: 366 SCP--ELRPHVEPRPLPS---FCPPRRLDQCPESPLQRCP------PPAPRPRLRPEPCI 414
Query: 178 TEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRP 209
+ PR P L PEP R RP
Sbjct: 415 SLEPRPRPLPRQLSEPCLYPEPLPALRPTPRP 446
Score = 38.5 bits (88), Expect = 0.005
Identities = 53/174 (30%), Positives = 67/174 (38%), Gaps = 26/174 (14%)
Query: 67 CDRE-PGARPEVLLVGARRCTPACKP-----LRLPELLPTLGTQPRSPSTGP---DRVPR 117
C R+ P R V + RR + +C P PEL P + +P P D+ P
Sbjct: 334 CPRQVPPQRCPVEIPPIRRRSQSCGPQPSWGASCPELRPHVEPRPLPSFCPPRRLDQCPE 393
Query: 118 SS-RRLPPESRRPGGPAKTHPARSACCRPRKSGRW---PQSTARGLPA-KTRPKP-PAPA 171
S +R PP + RP + P S RPR R P LPA + P+P P P
Sbjct: 394 SPLQRCPPPAPRPR--LRPEPCISLEPRPRPLPRQLSEPCLYPEPLPALRPTPRPVPLPR 451
Query: 172 PQQ-------PALT--EHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGPS 216
P Q P L EH EP PE + L P P P GP+
Sbjct: 452 PGQCEIPEPRPCLQPCEHPEPCPRPEPIPLPAPCPSPEPCRETWRSPSPCWGPN 505
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 42.0 bits (97), Expect = 4e-04
Identities = 45/181 (24%), Positives = 55/181 (30%), Gaps = 18/181 (9%)
Query: 20 DQPVVFPQERGGDLAELTPDTQLLQLRSTLRLRGPRGWKVGRRPNLTCDREPGARPEVLL 79
+ P+ P E GG + S + GP G + P LT P P
Sbjct: 17 EHPMAVPGESGGRTGNW--------VSSVGEMTGPYGPREMGTPTLTPSSPPTLTPSN-- 66
Query: 80 VGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPAR 139
TP P P L P T +PS P P S+ L P S P+ T
Sbjct: 67 ------TPTLTPCSTPTLTPC-STPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLT 119
Query: 140 SACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQ-PALTEHQEPRAWPEVLGLLVTAPE 198
+ P T P TR P P P LT P P L +
Sbjct: 120 PSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSST 179
Query: 199 P 199
P
Sbjct: 180 P 180
Score = 41.6 bits (96), Expect = 6e-04
Identities = 38/146 (26%), Positives = 49/146 (33%), Gaps = 10/146 (6%)
Query: 63 PNLTCDREPGARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRL 122
P LT P P R TP P P L P+ T +PS+ P P S+ L
Sbjct: 124 PTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPS-STPTLTPSSTPTLTPSSTPTL 182
Query: 123 PPESR----RPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAP-----Q 173
P SR R P T + P +T +P+ T P+ P
Sbjct: 183 TPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSS 242
Query: 174 QPALTEHQEPRAWPEVLGLLVTAPEP 199
+P LT P P L + P
Sbjct: 243 RPTLTRSSTPTLTPSSTPTLTPSSTP 268
Score = 38.1 bits (87), Expect = 0.006
Identities = 31/107 (28%), Positives = 39/107 (36%), Gaps = 5/107 (4%)
Query: 63 PNLTCDREPGARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRL 122
P LT P P + R TP P P L P+ T +PS P +P S+ L
Sbjct: 172 PTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPS-STPTLTPSNTPTLIPSSTPTL 230
Query: 123 PPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPA 169
P S P T +R R P ST P+ T P+
Sbjct: 231 TPSST----PTLTPSSRPTLTRSSTPTLTPSSTPTLTPSSTPTLTPS 273
Score = 37.4 bits (85), Expect = 0.011
Identities = 42/165 (25%), Positives = 57/165 (34%), Gaps = 10/165 (6%)
Query: 63 PNLTCDREPGARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRRL 122
P+ T P + P + TP+ P P PTL +PS+ P S+ L
Sbjct: 96 PSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTL-----TPSSTPTLTRSSTPTL 150
Query: 123 PPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAPAPQQ-PALTEHQ 181
P S P+ T + P T P TR P P P LT
Sbjct: 151 TPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSS 210
Query: 182 EPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGG-PSLPSTESRVP 225
P P L+ + P T T + + +P P+L T S P
Sbjct: 211 TPTLTPSNTPTLIPSSTP-TLTPSSTPTLTPSSRPTL--TRSSTP 252
Score = 30.0 bits (66), Expect = 1.7
Identities = 32/130 (24%), Positives = 46/130 (35%), Gaps = 13/130 (10%)
Query: 101 LGTQPRSPSTGPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKS-GRWPQSTARGL 159
+GT +PS+ P P ++ L P S P + C P + P T
Sbjct: 49 MGTPTLTPSSPPTLTPSNTPTLTPCST---------PTLTPCSTPTLTPSNTPTLTPSST 99
Query: 160 PAKTRPKPPAPAPQQ-PALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGG-PSL 217
P T P P P LT P P L + P T TR+ + +P P+L
Sbjct: 100 PTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTP-TLTRSSTPTLTPSSTPTL 158
Query: 218 PSTESRVPAP 227
+ + P
Sbjct: 159 TPSSTPTLTP 168
Score = 28.1 bits (61), Expect = 6.5
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 62 RPNLTCDREPGARPEVLLVGARRCTPACKPLRLPELLPTLGTQPRSPSTGPDRVPRSSRR 121
RP LT P P TP P P L+P+ T +PS+ P P S
Sbjct: 187 RPILTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPS-STPTLTPSSTPTLTPSSRPT 245
Query: 122 LPPESRRPGGPAKT 135
L S P+ T
Sbjct: 246 LTRSSTPTLTPSST 259
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 42.0 bits (97), Expect = 4e-04
Identities = 51/165 (30%), Positives = 60/165 (36%), Gaps = 21/165 (12%)
Query: 52 RGPRGWKVGRRPNLTCDREPGARPEVLLVGARRCTPACKPLRLPELLPTLGTQP-RSPST 110
RGP WK GR P R P A E L +P PE P G P RSP
Sbjct: 53 RGPL-WK-GRGP---AGRAPAASAETALP---------RPREPPE--PGAGPSPKRSP-- 94
Query: 111 GPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGLPAKTRPKPPAP 170
P R PR+S PE + G R C P R + R + AP
Sbjct: 95 -PPRAPRASSLAAPEPQ-VGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAP 152
Query: 171 APQQPALTEHQEPRAWPEVLGLLVTAPEPRTKTRAQSRPRSPGGP 215
P + + + P A V G A TRAQ+ P PG P
Sbjct: 153 HPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFP 197
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,054,411
Number of Sequences: 37866
Number of extensions: 855314
Number of successful extensions: 8774
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 1074
Number of HSP's that attempted gapping in prelim test: 6104
Number of HSP's gapped (non-prelim): 2902
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.