LOC390595 20569

Name: LOC390595	Sequence: fasta or formatted (290aa)		NCBI GI: 239750857
Description: PREDICTED: similar to ubiquitin-associated protein 1 (predicted)		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt mRNA [290aa] PREDICTED: hypothetical protein alt mRNA [290aa] PREDICTED: similar to ubiquitin-associated protein 1 (predicted)
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.7 31 2 C cysteine 1.7 5 1 D aspartate 2.4 7 1 E glutamate 6.6 19 3 F phenylalanine 1.7 5 1 G glycine 9.3 27 1 H histidine 3.4 10 1 I isoleucine 2.4 7 2 K lysine 1.4 4 1 L leucine 12.8 37 3 M methionine 0.7 2 1 N asparagine 0.3 1 1 P proline 17.2 50 2 Q glutamine 2.1 6 1 R arginine 7.6 22 3 S serine 10.3 30 2 T threonine 2.8 8 2 V valine 4.8 14 2 W tryptophan 1.0 3 1 Y tyrosine 0.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to ubiquitin-associated protein ... LOC390595 1.000 PREDICTED: similar to ubiquitin-associated protein ... LOC390595 1.000 PREDICTED: hypothetical protein NFATC1 0.052 nuclear factor of activated T-cells, cytosolic compo... WBP11 0.045 WW domain binding protein 11 FAM110A 0.045 hypothetical protein LOC83541 FAM110A 0.045 hypothetical protein LOC83541 FAM110A 0.045 hypothetical protein LOC83541 PLEKHA4 0.044 pleckstrin homology domain containing family A memb... MAST3 0.044 microtubule associated serine/threonine kinase 3 [H... SGIP1 0.044 SH3-domain GRB2-like (endophilin) interacting prote... LOC100289242 0.042 PREDICTED: hypothetical protein XP_002342243 LOC100287256 0.042 PREDICTED: hypothetical protein LOC100287256 0.042 PREDICTED: hypothetical protein XP_002342497 MLL4 0.042 myeloid/lymphoid or mixed-lineage leukemia 4 C1orf65 0.040 hypothetical protein LOC164127 LOC100290551 0.040 PREDICTED: hypothetical protein XP_002346417 LOC100287437 0.040 PREDICTED: hypothetical protein XP_002342117 LOC100292589 0.040 PREDICTED: hypothetical protein LOC100293496 0.040 PREDICTED: hypothetical protein LOC100290121 0.040 PREDICTED: hypothetical protein XP_002346879 LOC100289406 0.040 PREDICTED: hypothetical protein XP_002342721 TAF4 0.038 TBP-associated factor 4 SYNPO 0.038 synaptopodin isoform A SAMD1 0.038 sterile alpha motif domain containing 1 SASH1 0.038 SAM and SH3 domain containing 1 GLTSCR1 0.038 glioma tumor suppressor candidate region gene 1 [Ho... TPRX1 0.038 tetra-peptide repeat homeobox LOC100292727 0.038 PREDICTED: hypothetical protein LMTK3 0.038 lemur tyrosine kinase 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.