Guide to the Human Genome
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Name: GAS2L1 Sequence: fasta or formatted (681aa) NCBI GI: 23065526
Description:

growth arrest-specific 2 like 1 isoform a

Referenced in:

Additional Cell Cycle Functions

Other entries for this name:
alt mRNA [681aa] growth arrest-specific 2 like 1 isoform a
alt prot [337aa] growth arrest-specific 2 like 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         68           3
 C cysteine            1.8         12           1
 D aspartate           4.7         32           2
 E glutamate           5.6         38           3
 F phenylalanine       1.9         13           1
 G glycine             9.3         63           3
 H histidine           1.5         10           1
 I isoleucine          1.2          8           1
 K lysine              1.5         10           1
 L leucine             8.1         55           2
 M methionine          1.6         11           1
 N asparagine          1.2          8           1
 P proline            12.3         84           2
 Q glutamine           3.4         23           2
 R arginine           12.0         82           2
 S serine             10.7         73           8
 T threonine           6.0         41           2
 V valine              5.4         37           2
 W tryptophan          1.0          7           1
 Y tyrosine            0.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth arrest-specific 2 like 1 isoform a 
GAS2L1                1.000   growth arrest-specific 2 like 1 isoform a 
GAS2L1                0.484   growth arrest-specific 2 like 1 isoform b 
GAS2L2                0.230   growth arrest-specific 2 like 2 
GAS2                  0.107   growth arrest-specific 2 
GAS2                  0.107   growth arrest-specific 2 
GAS2                  0.107   growth arrest-specific 2 
GAS2L3                0.104   growth arrest-specific 2 like 3 
MACF1                 0.046   microfilament and actin filament cross-linker protei...
MACF1                 0.042   microfilament and actin filament cross-linker protei...
DST                   0.035   dystonin isoform 4 
DST                   0.035   dystonin isoform 3 
DST                   0.035   dystonin isoform 2 
DST                   0.035   dystonin isoform 1 
DST                   0.035   dystonin isoform 1eA precursor 
SRRM2                 0.032   splicing coactivator subunit SRm300 
COL5A1                0.030   alpha 1 type V collagen preproprotein 
LOC100133756          0.029   PREDICTED: hypothetical protein, partial 
SRRM1                 0.029   serine/arginine repetitive matrix 1 
COL11A1               0.027   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.027   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.027   alpha 1 type XI collagen isoform A preproprotein [Ho...
NACA                  0.027   nascent polypeptide-associated complex alpha subuni...
PRG4                  0.027   proteoglycan 4 isoform D 
PRG4                  0.027   proteoglycan 4 isoform C 
PRG4                  0.027   proteoglycan 4 isoform B 
PRG4                  0.027   proteoglycan 4 isoform A 
CASKIN2               0.026   cask-interacting protein 2 isoform b 
CASKIN2               0.026   cask-interacting protein 2 isoform a 
FLJ22184              0.025   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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