Guide to the Human Genome
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Name: LOC100131488 Sequence: fasta or formatted (86aa) NCBI GI: 239753876
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           15.1         13           1
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       2.3          2           1
 G glycine             1.2          1           1
 H histidine           9.3          8           1
 I isoleucine         16.3         14           1
 K lysine              0.0          0           0
 L leucine             0.0          0           0
 M methionine          9.3          8           1
 N asparagine          0.0          0           0
 P proline             0.0          0           0
 Q glutamine           0.0          0           0
 R arginine            0.0          0           0
 S serine              0.0          0           0
 T threonine           8.1          7           1
 V valine             15.1         13           1
 W tryptophan          0.0          0           0
 Y tyrosine           23.3         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100291751          0.650   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100129825          0.550   PREDICTED: hypothetical protein 
LOC100129825          0.539   PREDICTED: hypothetical protein 
LOC100134730          0.539   PREDICTED: hypothetical protein 
LOC100133975          0.533   PREDICTED: hypothetical protein, partial 
LOC100134411          0.528   PREDICTED: hypothetical protein 
LOC100293574          0.528   PREDICTED: hypothetical protein, partial 
LOC100134576          0.517   PREDICTED: hypothetical protein 
LOC100133226          0.511   PREDICTED: hypothetical protein 
LOC100134279          0.500   PREDICTED: hypothetical protein, partial 
LOC100133807          0.494   PREDICTED: similar to serine/threonine-protein kina...
LOC100288317          0.494   PREDICTED: hypothetical protein XP_002342505 
LOC100131203          0.489   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.489   PREDICTED: similar to serine/threonine-protein kina...
LOC100293155          0.489   PREDICTED: hypothetical protein 
LOC100134395          0.483   PREDICTED: hypothetical protein, partial 
LOC100294466          0.483   PREDICTED: hypothetical protein, partial 
LOC100131203          0.478   PREDICTED: hypothetical protein 
LOC100133450          0.478   PREDICTED: hypothetical protein, partial 
LOC100287975          0.478   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100133741          0.472   PREDICTED: hypothetical protein 
LOC100134332          0.472   PREDICTED: hypothetical protein, partial 
LOC100291272          0.472   PREDICTED: hypothetical protein XP_002348172 
LOC100287989          0.472   PREDICTED: hypothetical protein XP_002343908 
LOC100132423          0.472   PREDICTED: hypothetical protein, partial 
LOC100289649          0.472   PREDICTED: hypothetical protein XP_002342367 
LOC100132016          0.467   PREDICTED: hypothetical protein 
LOC100129642          0.461   PREDICTED: hypothetical protein 
LOC100132679          0.461   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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